#SentieonCommandLine: /lustre8/home/ykawai-tnproj-pg/packages/sentieon-genomics-201911/libexec/driver -t 8 -r /lustre8/home/ncbn-pg/data/resource/Homo_sapiens_assembly38.fasta --interval /lustre8/home/ncbn-pg/data/resource/picard-interval-list/GRCh38.autosome-PAR.interval_list -i SGDP/LP6005592-DNA_B02.hs38DH/LP6005592-DNA_B02.hs38DH.cram --algo WgsMetricsAlgo --min_map_qual 0 SGDP/LP6005592-DNA_B02.hs38DH/QCmetrics/LP6005592-DNA_B02.hs38DH.WgsMetrics.autosome.txt GENOME_TERRITORY MEAN_COVERAGE SD_COVERAGE MEDIAN_COVERAGE MAD_COVERAGE PCT_EXC_MAPQ PCT_EXC_DUPE PCT_EXC_UNPAIRED PCT_EXC_BASEQ PCT_EXC_OVERLAP PCT_EXC_CAPPED PCT_EXC_TOTAL PCT_1X PCT_5X PCT_10X PCT_15X PCT_20X PCT_25X PCT_30X PCT_40X PCT_50X PCT_60X PCT_70X PCT_80X PCT_90X PCT_100X HET_SNP_SENSITIVITY HET_SNP_Q 2747965384 33.761 11.481 33 5 0 0.01974 0.0028247 0.071015 0.0051403 0.011076 0.1098 0.99892 0.99686 0.99365 0.9853 0.956 0.86832 0.68802 0.21974 0.0285 0.0077358 0.0054462 0.0042445 0.0034161 0.0028123 0.99776 26 coverage high_quality_coverage_count 0 2972274 1 1577909 2 1383367 3 1338301 4 1354823 5 1416587 6 1516419 7 1688702 8 1933082 9 2278776 10 2757017 11 3405615 12 4281229 13 5455863 14 7027489 15 9102490 16 11781387 17 15219726 18 19549643 19 24863726 20 31230890 21 38701479 22 47228590 23 56740993 24 67036476 25 77839815 26 88850439 27 99673605 28 109941639 29 119167298 30 127011868 31 133102621 32 137143610 33 138963330 34 138479074 35 135730594 36 130821095 37 123997412 38 115609003 39 105962859 40 95573165 41 84811170 42 74052863 43 63625214 44 53805360 45 44802855 46 36767602 47 29724708 48 23692632 49 18656482 50 14505961 51 11164556 52 8518027 53 6452141 54 4868892 55 3674702 56 2784088 57 2131320 58 1650988 59 1307909 60 1058776 61 881615 62 753437 63 660136 64 588766 65 536883 66 496380 67 463337 68 437285 69 415030 70 395980 71 377002 72 362487 73 346572 74 333378 75 321689 76 308737 77 296930 78 284625 79 274780 80 265375 81 256260 82 246188 83 238021 84 230338 85 221943 86 215156 87 207540 88 201148 89 194400 90 189050 91 183217 92 177262 93 173092 94 167101 95 162384 96 158486 97 153520 98 149426 99 145869 100 141314 101 137870 102 133451 103 130278 104 127421 105 123455 106 120005 107 117296 108 113842 109 111454 110 108579 111 105958 112 102983 113 100515 114 97643 115 94665 116 91813 117 89589 118 87012 119 85066 120 82946 121 81322 122 79103 123 76828 124 75236 125 72895 126 71622 127 69411 128 67431 129 65574 130 64003 131 62412 132 60562 133 59213 134 58198 135 56631 136 54722 137 53533 138 52291 139 50862 140 49843 141 49160 142 47618 143 47185 144 45712 145 44828 146 44217 147 43302 148 42766 149 41914 150 40862 151 40134 152 39577 153 39185 154 38194 155 37759 156 37097 157 36330 158 35885 159 35361 160 34872 161 33966 162 33666 163 33409 164 32617 165 32517 166 31646 167 31296 168 30459 169 30102 170 29622 171 28946 172 28633 173 28029 174 27697 175 27457 176 26989 177 26275 178 25860 179 25470 180 25519 181 25019 182 24517 183 23964 184 24103 185 23588 186 23432 187 22647 188 22547 189 22060 190 21727 191 21771 192 21225 193 21107 194 20354 195 20312 196 20192 197 19524 198 19716 199 19143 200 18776 201 18773 202 18436 203 18184 204 18078 205 17483 206 17391 207 16843 208 16835 209 16992 210 16530 211 16299 212 16090 213 16021 214 15424 215 15359 216 15073 217 14951 218 14577 219 14448 220 14325 221 14198 222 13982 223 13734 224 13547 225 13305 226 13262 227 12853 228 12903 229 12886 230 12598 231 12544 232 12254 233 11946 234 11806 235 11477 236 11590 237 11258 238 11268 239 10977 240 11121 241 11133 242 10583 243 10635 244 10475 245 10503 246 10216 247 10368 248 10126 249 9972 250 1623697