#SentieonCommandLine: /lustre8/home/ykawai-tnproj-pg/packages/sentieon-genomics-201911/libexec/driver -t 8 -r /lustre8/home/ncbn-pg/data/resource/Homo_sapiens_assembly38.fasta --interval /lustre8/home/ncbn-pg/data/resource/picard-interval-list/GRCh38.chrX.interval_list -i SGDP/LP6005592-DNA_B02.hs38DH/LP6005592-DNA_B02.hs38DH.cram --algo WgsMetricsAlgo --min_map_qual 0 SGDP/LP6005592-DNA_B02.hs38DH/QCmetrics/LP6005592-DNA_B02.hs38DH.WgsMetrics.chrX.txt GENOME_TERRITORY MEAN_COVERAGE SD_COVERAGE MEDIAN_COVERAGE MAD_COVERAGE PCT_EXC_MAPQ PCT_EXC_DUPE PCT_EXC_UNPAIRED PCT_EXC_BASEQ PCT_EXC_OVERLAP PCT_EXC_CAPPED PCT_EXC_TOTAL PCT_1X PCT_5X PCT_10X PCT_15X PCT_20X PCT_25X PCT_30X PCT_40X PCT_50X PCT_60X PCT_70X PCT_80X PCT_90X PCT_100X HET_SNP_SENSITIVITY HET_SNP_Q 152114341 17.19 5.3966 17 3 0 0.012955 0.0034668 0.067993 0.0050997 0.00017804 0.089692 0.99887 0.99281 0.94348 0.7012 0.30682 0.072457 0.011871 0.0015398 0.00072158 0.00042853 0.00028442 0.00020025 0.00014531 0.00010805 0.9923 21 coverage high_quality_coverage_count 0 171408 1 137326 2 179067 3 248120 4 357789 5 530920 6 817083 7 1271384 8 1959802 9 2924215 10 4184940 11 5698532 12 7368210 13 9049523 14 10553057 15 11721496 16 12396782 17 12532346 18 12112363 19 11228706 20 10007147 21 8569126 22 7076355 23 5641454 24 4355509 25 3256376 26 2360871 27 1668655 28 1152856 29 777232 30 518997 31 342549 32 228111 33 152886 34 104584 35 72927 36 53285 37 40121 38 31985 39 26024 40 21531 41 18350 42 15711 43 13580 44 11853 45 10609 46 9623 47 8495 48 7792 49 6916 50 6098 51 5623 52 5174 53 4976 54 4634 55 4270 56 3818 57 3585 58 3340 59 3058 60 2881 61 2665 62 2493 63 2407 64 2250 65 2041 66 1950 67 1824 68 1790 69 1621 70 1528 71 1516 72 1469 73 1355 74 1284 75 1273 76 1228 77 1110 78 1022 79 1018 80 930 81 939 82 898 83 834 84 915 85 867 86 815 87 770 88 705 89 684 90 633 91 618 92 622 93 559 94 540 95 537 96 560 97 534 98 527 99 538 100 468 101 448 102 405 103 403 104 395 105 389 106 361 107 368 108 304 109 326 110 327 111 293 112 323 113 287 114 281 115 270 116 281 117 249 118 260 119 221 120 228 121 242 122 204 123 242 124 187 125 201 126 204 127 193 128 199 129 195 130 164 131 167 132 159 133 150 134 144 135 142 136 134 137 147 138 142 139 132 140 113 141 108 142 120 143 131 144 106 145 109 146 102 147 110 148 91 149 91 150 95 151 73 152 77 153 65 154 68 155 72 156 70 157 74 158 73 159 64 160 60 161 80 162 93 163 77 164 66 165 60 166 55 167 50 168 67 169 66 170 57 171 64 172 70 173 57 174 99 175 72 176 70 177 80 178 71 179 75 180 80 181 64 182 73 183 62 184 67 185 53 186 45 187 57 188 34 189 41 190 40 191 32 192 37 193 27 194 42 195 35 196 23 197 30 198 25 199 26 200 22 201 29 202 22 203 25 204 22 205 38 206 21 207 20 208 24 209 27 210 28 211 24 212 34 213 27 214 34 215 31 216 28 217 35 218 24 219 25 220 33 221 33 222 28 223 23 224 29 225 29 226 14 227 17 228 11 229 15 230 7 231 14 232 9 233 16 234 14 235 17 236 8 237 9 238 9 239 10 240 9 241 21 242 11 243 12 244 10 245 11 246 9 247 6 248 8 249 12 250 1113