#SentieonCommandLine: /lustre8/home/ykawai-tnproj-pg/packages/sentieon-genomics-201911/libexec/driver -t 8 -r /lustre8/home/ncbn-pg/data/resource/Homo_sapiens_assembly38.fasta --interval /lustre8/home/ncbn-pg/data/resource/picard-interval-list/GRCh38.chrX.interval_list -i SGDP/LP6005592-DNA_B03.hs38DH/LP6005592-DNA_B03.hs38DH.cram --algo WgsMetricsAlgo --min_map_qual 0 SGDP/LP6005592-DNA_B03.hs38DH/QCmetrics/LP6005592-DNA_B03.hs38DH.WgsMetrics.chrX.txt
GENOME_TERRITORY	MEAN_COVERAGE	SD_COVERAGE	MEDIAN_COVERAGE	MAD_COVERAGE	PCT_EXC_MAPQ	PCT_EXC_DUPE	PCT_EXC_UNPAIRED	PCT_EXC_BASEQ	PCT_EXC_OVERLAP	PCT_EXC_CAPPED	PCT_EXC_TOTAL	PCT_1X	PCT_5X	PCT_10X	PCT_15X	PCT_20X	PCT_25X	PCT_30X	PCT_40X	PCT_50X	PCT_60X	PCT_70X	PCT_80X	PCT_90X	PCT_100X	HET_SNP_SENSITIVITY	HET_SNP_Q	
152114341	21.352	6.5001	21	4	0	0.01467	0.0012999	0.047925	0.0063839	0.00028808	0.070567	0.99734	0.99036	0.97678	0.90034	0.6315	0.27069	0.068435	0.0047503	0.0018773	0.0010597	0.00071304	0.00053295	0.00041615	0.00033586	0.99289	21	

coverage	high_quality_coverage_count	
0	404747
1	280586
2	265268
3	255948
4	260123
5	272544
6	299563
7	360440
8	471512
9	660869
10	968174
11	1436672
12	2100956
13	2997212
14	4124724
15	5441987
16	6868752
17	8301181
18	9612950
19	10670474
20	11343688
21	11583497
22	11376491
23	10758311
24	9821611
25	8654405
26	7376980
27	6084613
28	4868441
29	3781645
30	2861946
31	2111000
32	1518960
33	1071717
34	743034
35	509185
36	347395
37	238269
38	166049
39	119827
40	89235
41	69319
42	55654
43	46421
44	40408
45	34543
46	30360
47	26571
48	23351
49	21163
50	18830
51	16794
52	15307
53	13799
54	12546
55	11261
56	10332
57	9135
58	8537
59	7838
60	7066
61	6581
62	6131
63	5778
64	5231
65	4911
66	4737
67	4369
68	4049
69	3874
70	3505
71	3221
72	3067
73	2802
74	2729
75	2683
76	2575
77	2397
78	2242
79	2173
80	2064
81	1935
82	1879
83	1931
84	1814
85	1772
86	1652
87	1670
88	1525
89	1525
90	1452
91	1384
92	1406
93	1325
94	1290
95	1254
96	1120
97	1044
98	961
99	978
100	904
101	884
102	897
103	922
104	827
105	860
106	821
107	772
108	841
109	786
110	820
111	746
112	723
113	682
114	682
115	726
116	701
117	742
118	701
119	687
120	672
121	714
122	622
123	629
124	652
125	675
126	674
127	638
128	657
129	634
130	664
131	638
132	600
133	573
134	546
135	531
136	446
137	510
138	506
139	463
140	433
141	442
142	438
143	403
144	373
145	352
146	343
147	332
148	323
149	303
150	284
151	298
152	260
153	286
154	252
155	285
156	251
157	282
158	258
159	301
160	236
161	270
162	256
163	264
164	235
165	242
166	271
167	235
168	264
169	241
170	266
171	232
172	209
173	235
174	232
175	216
176	211
177	207
178	205
179	174
180	214
181	186
182	150
183	169
184	149
185	161
186	160
187	161
188	148
189	133
190	122
191	123
192	113
193	136
194	159
195	125
196	119
197	108
198	118
199	101
200	97
201	108
202	113
203	89
204	95
205	97
206	94
207	108
208	111
209	93
210	94
211	99
212	106
213	100
214	100
215	86
216	92
217	97
218	92
219	77
220	80
221	82
222	81
223	78
224	76
225	75
226	68
227	62
228	74
229	76
230	63
231	74
232	73
233	70
234	84
235	64
236	70
237	62
238	63
239	61
240	52
241	55
242	60
243	49
244	58
245	57
246	63
247	45
248	69
249	38
250	5336