#SentieonCommandLine: /lustre8/home/ykawai-tnproj-pg/packages/sentieon-genomics-201911/libexec/driver -t 8 -r /lustre8/home/ncbn-pg/data/resource/Homo_sapiens_assembly38.fasta --interval /lustre8/home/ncbn-pg/data/resource/picard-interval-list/GRCh38.chrX.interval_list -i SGDP/LP6005592-DNA_B04.hs38DH/LP6005592-DNA_B04.hs38DH.cram --algo WgsMetricsAlgo --min_map_qual 0 SGDP/LP6005592-DNA_B04.hs38DH/QCmetrics/LP6005592-DNA_B04.hs38DH.WgsMetrics.chrX.txt GENOME_TERRITORY MEAN_COVERAGE SD_COVERAGE MEDIAN_COVERAGE MAD_COVERAGE PCT_EXC_MAPQ PCT_EXC_DUPE PCT_EXC_UNPAIRED PCT_EXC_BASEQ PCT_EXC_OVERLAP PCT_EXC_CAPPED PCT_EXC_TOTAL PCT_1X PCT_5X PCT_10X PCT_15X PCT_20X PCT_25X PCT_30X PCT_40X PCT_50X PCT_60X PCT_70X PCT_80X PCT_90X PCT_100X HET_SNP_SENSITIVITY HET_SNP_Q 152114341 16.126 5.1577 16 3 0 0.0091405 0.0016561 0.051306 0.0064699 0.00016322 0.068736 0.99858 0.99284 0.93232 0.62606 0.21706 0.039736 0.0073347 0.0016671 0.0007343 0.00042899 0.00029118 0.00021648 0.00016787 0.00013217 0.99139 21 coverage high_quality_coverage_count 0 215811 1 139644 2 165797 3 228000 4 340049 5 547572 6 900311 7 1510130 8 2456273 9 3791017 10 5496136 11 7467772 12 9502792 13 11350773 14 12769545 15 13556288 16 13613405 17 12997697 18 11808072 19 10239906 20 8492915 21 6755699 22 5174717 23 3818954 24 2730619 25 1889524 26 1273396 27 845413 28 555802 29 364593 30 241579 31 163413 32 115564 33 85631 34 65712 35 52350 36 43103 37 36379 38 31472 39 26924 40 23518 41 20738 42 18075 43 16094 44 14152 45 12348 46 10998 47 9735 48 8512 49 7725 50 6918 51 6249 52 5642 53 4924 54 4630 55 4259 56 3776 57 3549 58 3331 59 3164 60 2876 61 2694 62 2381 63 2360 64 2138 65 1950 66 1852 67 1663 68 1588 69 1460 70 1430 71 1320 72 1288 73 1150 74 1118 75 1101 76 1050 77 1004 78 970 79 933 80 852 81 831 82 753 83 781 84 747 85 743 86 705 87 709 88 644 89 628 90 587 91 626 92 543 93 543 94 564 95 527 96 493 97 529 98 531 99 488 100 435 101 457 102 424 103 386 104 447 105 376 106 385 107 361 108 332 109 328 110 335 111 293 112 325 113 326 114 304 115 273 116 278 117 288 118 293 119 307 120 267 121 275 122 243 123 240 124 191 125 243 126 215 127 187 128 201 129 188 130 165 131 182 132 179 133 176 134 176 135 170 136 148 137 160 138 166 139 129 140 157 141 131 142 132 143 157 144 132 145 140 146 156 147 130 148 142 149 156 150 135 151 119 152 119 153 116 154 109 155 145 156 119 157 123 158 112 159 114 160 101 161 90 162 102 163 108 164 105 165 95 166 76 167 86 168 79 169 101 170 83 171 96 172 81 173 99 174 73 175 83 176 63 177 91 178 74 179 72 180 73 181 71 182 90 183 65 184 67 185 63 186 67 187 49 188 59 189 42 190 43 191 35 192 47 193 36 194 40 195 44 196 49 197 53 198 30 199 37 200 30 201 32 202 43 203 46 204 38 205 53 206 49 207 49 208 38 209 34 210 34 211 34 212 34 213 35 214 37 215 32 216 36 217 30 218 30 219 33 220 29 221 36 222 32 223 37 224 36 225 40 226 31 227 37 228 41 229 37 230 29 231 31 232 25 233 31 234 28 235 28 236 30 237 27 238 25 239 28 240 28 241 31 242 23 243 34 244 25 245 23 246 24 247 29 248 23 249 29 250 2135