#SentieonCommandLine: /lustre8/home/ykawai-tnproj-pg/packages/sentieon-genomics-201911/libexec/driver -t 8 -r /lustre8/home/ncbn-pg/data/resource/Homo_sapiens_assembly38.fasta --interval /lustre8/home/ncbn-pg/data/resource/picard-interval-list/GRCh38.chrY.interval_list -i SGDP/LP6005592-DNA_B04.hs38DH/LP6005592-DNA_B04.hs38DH.cram --algo WgsMetricsAlgo --min_map_qual 0 SGDP/LP6005592-DNA_B04.hs38DH/QCmetrics/LP6005592-DNA_B04.hs38DH.WgsMetrics.chrY.txt GENOME_TERRITORY MEAN_COVERAGE SD_COVERAGE MEDIAN_COVERAGE MAD_COVERAGE PCT_EXC_MAPQ PCT_EXC_DUPE PCT_EXC_UNPAIRED PCT_EXC_BASEQ PCT_EXC_OVERLAP PCT_EXC_CAPPED PCT_EXC_TOTAL PCT_1X PCT_5X PCT_10X PCT_15X PCT_20X PCT_25X PCT_30X PCT_40X PCT_50X PCT_60X PCT_70X PCT_80X PCT_90X PCT_100X HET_SNP_SENSITIVITY HET_SNP_Q 23636355 19.551 24.49 16 3 0 0.052604 0.0013199 0.04406 0.0095032 0.32135 0.42884 0.99145 0.98605 0.92661 0.6319 0.24706 0.080229 0.045256 0.031767 0.025484 0.022126 0.019715 0.017735 0.01602 0.014551 0.98445 18 coverage high_quality_coverage_count 0 202133 1 28337 2 23128 3 29627 4 46456 5 78403 6 135360 7 231685 8 379784 9 579728 10 835969 11 1123303 12 1422291 13 1691669 14 1892572 15 2000601 16 1999830 17 1897435 18 1713445 19 1484893 20 1228003 21 980452 22 755043 23 565869 24 414010 25 293573 26 206705 27 145734 28 105045 29 75586 30 57496 31 45385 32 37617 33 32733 34 28676 35 26476 36 24632 37 23204 38 21729 39 20890 40 19839 41 18320 42 17485 43 16192 44 15089 45 13947 46 13136 47 12141 48 11551 49 10806 50 9907 51 9539 52 8954 53 8360 54 7874 55 7535 56 7112 57 7028 58 6552 59 6514 60 6332 61 5980 62 5865 63 5781 64 5685 65 5634 66 5486 67 5354 68 5405 69 5462 70 5137 71 4989 72 4883 73 4774 74 4687 75 4593 76 4600 77 4481 78 4417 79 4242 80 4286 81 4349 82 4268 83 4011 84 3918 85 4006 86 3940 87 3895 88 3895 89 3959 90 3746 91 3806 92 3744 93 3536 94 3458 95 3468 96 3327 97 3276 98 3150 99 3203 100 3058 101 3004 102 2965 103 2896 104 2848 105 2898 106 2719 107 2767 108 2607 109 2557 110 2603 111 2457 112 2386 113 2168 114 2127 115 2107 116 2031 117 2020 118 1907 119 1892 120 1876 121 1937 122 1808 123 1835 124 1885 125 1773 126 1762 127 1687 128 1683 129 1608 130 1622 131 1379 132 1476 133 1439 134 1454 135 1432 136 1355 137 1401 138 1358 139 1328 140 1324 141 1279 142 1194 143 1215 144 1212 145 1221 146 1283 147 1236 148 1319 149 1239 150 1266 151 1337 152 1330 153 1316 154 1256 155 1247 156 1207 157 1215 158 1250 159 1199 160 1183 161 1170 162 1160 163 1134 164 1095 165 1004 166 956 167 986 168 968 169 939 170 925 171 915 172 886 173 901 174 918 175 877 176 834 177 836 178 808 179 817 180 822 181 874 182 774 183 830 184 808 185 785 186 744 187 839 188 841 189 777 190 771 191 765 192 705 193 745 194 748 195 736 196 730 197 773 198 760 199 720 200 714 201 730 202 703 203 647 204 675 205 664 206 682 207 699 208 726 209 621 210 697 211 662 212 604 213 603 214 546 215 587 216 591 217 593 218 577 219 546 220 537 221 527 222 492 223 493 224 550 225 518 226 492 227 508 228 515 229 505 230 510 231 490 232 511 233 537 234 475 235 476 236 491 237 495 238 458 239 459 240 438 241 431 242 412 243 481 244 428 245 411 246 367 247 380 248 397 249 367 250 174802