#SentieonCommandLine: /lustre8/home/ykawai-tnproj-pg/packages/sentieon-genomics-201911/libexec/driver -t 8 -r /lustre8/home/ncbn-pg/data/resource/Homo_sapiens_assembly38.fasta --interval /lustre8/home/ncbn-pg/data/resource/picard-interval-list/GRCh38.chrX.interval_list -i SGDP/LP6005592-DNA_C02.hs38DH/LP6005592-DNA_C02.hs38DH.cram --algo WgsMetricsAlgo --min_map_qual 0 SGDP/LP6005592-DNA_C02.hs38DH/QCmetrics/LP6005592-DNA_C02.hs38DH.WgsMetrics.chrX.txt
GENOME_TERRITORY	MEAN_COVERAGE	SD_COVERAGE	MEDIAN_COVERAGE	MAD_COVERAGE	PCT_EXC_MAPQ	PCT_EXC_DUPE	PCT_EXC_UNPAIRED	PCT_EXC_BASEQ	PCT_EXC_OVERLAP	PCT_EXC_CAPPED	PCT_EXC_TOTAL	PCT_1X	PCT_5X	PCT_10X	PCT_15X	PCT_20X	PCT_25X	PCT_30X	PCT_40X	PCT_50X	PCT_60X	PCT_70X	PCT_80X	PCT_90X	PCT_100X	HET_SNP_SENSITIVITY	HET_SNP_Q	
152114341	22.79	6.3364	23	4	0	0.0096224	0.0018174	0.044844	0.0069012	0.00014713	0.063332	0.99909	0.99602	0.98685	0.93359	0.71847	0.36394	0.11221	0.0076261	0.0024785	0.0011458	0.00063283	0.00038729	0.00025907	0.00018754	0.99687	25	

coverage	high_quality_coverage_count	
0	138717
1	96001
2	106298
3	122426
4	141765
5	161967
6	194311
7	245656
8	330175
9	462858
10	672623
11	982531
12	1442752
13	2079758
14	2924598
15	3980097
16	5199472
17	6540682
18	7880312
19	9121575
20	10138138
21	10836439
22	11177486
23	11113705
24	10664166
25	9887630
26	8866954
27	7706174
28	6502966
29	5327088
30	4232125
31	3287039
32	2489013
33	1847715
34	1345900
35	962435
36	683012
37	481407
38	338716
39	241622
40	176730
41	132834
42	102498
43	81765
44	67973
45	57007
46	49016
47	42887
48	38133
49	34180
50	30644
51	27255
52	24872
53	22327
54	20387
55	18847
56	17050
57	15023
58	13905
59	12404
60	11378
61	10058
62	9187
63	8540
64	7788
65	7081
66	6687
67	6257
68	5619
69	5443
70	5125
71	4720
72	4385
73	4086
74	3758
75	3466
76	3283
77	3002
78	2840
79	2685
80	2568
81	2448
82	2225
83	2178
84	1961
85	1860
86	1744
87	1665
88	1495
89	1359
90	1314
91	1279
92	1304
93	1191
94	1145
95	1061
96	947
97	939
98	895
99	807
100	823
101	843
102	783
103	745
104	759
105	720
106	627
107	639
108	579
109	597
110	602
111	540
112	564
113	530
114	535
115	452
116	502
117	492
118	450
119	434
120	446
121	379
122	373
123	393
124	375
125	358
126	368
127	326
128	309
129	304
130	275
131	292
132	254
133	234
134	231
135	255
136	227
137	188
138	195
139	188
140	190
141	196
142	190
143	163
144	165
145	191
146	157
147	177
148	203
149	163
150	175
151	163
152	139
153	128
154	123
155	126
156	122
157	98
158	110
159	110
160	96
161	111
162	116
163	101
164	95
165	88
166	95
167	79
168	68
169	93
170	62
171	80
172	82
173	80
174	82
175	78
176	74
177	82
178	80
179	74
180	71
181	79
182	85
183	74
184	81
185	66
186	68
187	56
188	65
189	64
190	73
191	65
192	68
193	54
194	62
195	62
196	49
197	51
198	67
199	62
200	53
201	46
202	57
203	41
204	40
205	35
206	39
207	34
208	36
209	33
210	44
211	34
212	38
213	38
214	33
215	34
216	32
217	38
218	39
219	39
220	45
221	36
222	36
223	45
224	32
225	47
226	44
227	37
228	28
229	33
230	40
231	34
232	27
233	27
234	32
235	29
236	18
237	31
238	25
239	17
240	27
241	20
242	28
243	25
244	24
245	29
246	23
247	17
248	23
249	18
250	2534