#SentieonCommandLine: /lustre8/home/ykawai-tnproj-pg/packages/sentieon-genomics-201911/libexec/driver -t 8 -r /lustre8/home/ncbn-pg/data/resource/Homo_sapiens_assembly38.fasta --interval /lustre8/home/ncbn-pg/data/resource/picard-interval-list/GRCh38.chrX.interval_list -i SGDP/LP6005592-DNA_D01.hs38DH/LP6005592-DNA_D01.hs38DH.cram --algo WgsMetricsAlgo --min_map_qual 0 SGDP/LP6005592-DNA_D01.hs38DH/QCmetrics/LP6005592-DNA_D01.hs38DH.WgsMetrics.chrX.txt GENOME_TERRITORY MEAN_COVERAGE SD_COVERAGE MEDIAN_COVERAGE MAD_COVERAGE PCT_EXC_MAPQ PCT_EXC_DUPE PCT_EXC_UNPAIRED PCT_EXC_BASEQ PCT_EXC_OVERLAP PCT_EXC_CAPPED PCT_EXC_TOTAL PCT_1X PCT_5X PCT_10X PCT_15X PCT_20X PCT_25X PCT_30X PCT_40X PCT_50X PCT_60X PCT_70X PCT_80X PCT_90X PCT_100X HET_SNP_SENSITIVITY HET_SNP_Q 152114341 21.748 6.3784 22 4 0 0.0060214 0.0017932 0.036018 0.0032588 0.00019482 0.047286 0.99901 0.9957 0.98337 0.90792 0.64827 0.29223 0.08101 0.0070427 0.0027358 0.0012662 0.00067923 0.00043498 0.00029955 0.00020999 0.99641 24 coverage high_quality_coverage_count 0 150149 1 106237 2 115523 3 129506 4 153100 5 189685 6 241451 7 324821 8 455902 9 662807 10 975333 11 1441076 12 2090733 13 2949424 14 4021023 15 5270132 16 6640706 17 8006585 18 9272648 19 10306917 20 11009882 21 11319629 22 11217639 23 10719013 24 9892385 25 8819515 26 7625028 27 6380509 28 5195136 29 4109092 30 3167669 31 2382877 32 1753861 33 1264850 34 898232 35 631833 36 444798 37 315617 38 226538 39 165188 40 124332 41 98523 42 81357 43 68972 44 60446 45 53522 46 48269 47 43755 48 39779 49 36187 50 32571 51 30061 52 26917 53 24711 54 22696 55 20566 56 19001 57 17164 58 15528 59 14329 60 12993 61 11880 62 10891 63 9883 64 9006 65 8236 66 7622 67 7000 68 6170 69 5605 70 5104 71 4705 72 4394 73 3983 74 3721 75 3515 76 3196 77 2993 78 2873 79 2669 80 2474 81 2398 82 2282 83 2336 84 2127 85 1894 86 1998 87 1802 88 1731 89 1559 90 1577 91 1477 92 1390 93 1483 94 1400 95 1327 96 1311 97 1312 98 1189 99 1157 100 1073 101 1008 102 909 103 948 104 882 105 815 106 808 107 765 108 718 109 646 110 637 111 558 112 564 113 547 114 561 115 526 116 455 117 483 118 472 119 422 120 479 121 431 122 409 123 370 124 347 125 324 126 291 127 278 128 273 129 261 130 243 131 247 132 247 133 226 134 228 135 250 136 219 137 220 138 195 139 220 140 185 141 196 142 185 143 176 144 186 145 151 146 170 147 153 148 172 149 161 150 186 151 154 152 166 153 153 154 129 155 140 156 141 157 138 158 132 159 146 160 122 161 128 162 115 163 126 164 139 165 96 166 93 167 105 168 95 169 118 170 88 171 102 172 78 173 118 174 112 175 97 176 86 177 88 178 92 179 71 180 63 181 80 182 66 183 78 184 68 185 77 186 74 187 67 188 77 189 73 190 69 191 64 192 69 193 75 194 70 195 61 196 82 197 89 198 70 199 60 200 77 201 65 202 53 203 75 204 78 205 76 206 66 207 48 208 63 209 74 210 56 211 62 212 72 213 57 214 54 215 55 216 53 217 51 218 42 219 58 220 64 221 48 222 62 223 58 224 58 225 49 226 56 227 57 228 61 229 58 230 50 231 61 232 41 233 44 234 54 235 37 236 44 237 33 238 38 239 27 240 42 241 29 242 34 243 25 244 34 245 25 246 22 247 23 248 23 249 19 250 3156