#SentieonCommandLine: /lustre8/home/ykawai-tnproj-pg/packages/sentieon-genomics-201911/libexec/driver -t 8 -r /lustre8/home/ncbn-pg/data/resource/Homo_sapiens_assembly38.fasta --interval /lustre8/home/ncbn-pg/data/resource/picard-interval-list/GRCh38.chrX.interval_list -i SGDP/LP6005592-DNA_D04.hs38DH/LP6005592-DNA_D04.hs38DH.cram --algo WgsMetricsAlgo --min_map_qual 0 SGDP/LP6005592-DNA_D04.hs38DH/QCmetrics/LP6005592-DNA_D04.hs38DH.WgsMetrics.chrX.txt GENOME_TERRITORY MEAN_COVERAGE SD_COVERAGE MEDIAN_COVERAGE MAD_COVERAGE PCT_EXC_MAPQ PCT_EXC_DUPE PCT_EXC_UNPAIRED PCT_EXC_BASEQ PCT_EXC_OVERLAP PCT_EXC_CAPPED PCT_EXC_TOTAL PCT_1X PCT_5X PCT_10X PCT_15X PCT_20X PCT_25X PCT_30X PCT_40X PCT_50X PCT_60X PCT_70X PCT_80X PCT_90X PCT_100X HET_SNP_SENSITIVITY HET_SNP_Q 152114341 19.762 5.9477 20 3 0 0.01965 0.0027239 0.028592 0.0071562 0.00031047 0.058432 0.99857 0.99353 0.97471 0.85385 0.50877 0.16815 0.033225 0.0029361 0.0012597 0.00075775 0.00053771 0.00041283 0.0003304 0.00026681 0.99472 23 coverage high_quality_coverage_count 0 217622 1 152720 2 176064 3 201046 4 237204 5 288211 6 361162 7 483251 8 692639 9 1036814 10 1571327 11 2352429 12 3415079 13 4750394 14 6295321 15 7936524 16 9531645 17 10871315 18 11839813 19 12312975 20 12227548 21 11648250 22 10647200 23 9358099 24 7931598 25 6469334 26 5110348 27 3916795 28 2917466 29 2110096 30 1487413 31 1027868 32 698172 33 469141 34 318166 35 215819 36 148499 37 105425 38 77264 39 59666 40 47386 41 39200 42 32912 43 27840 44 24330 45 21358 46 18444 47 16455 48 14243 49 12835 50 11380 51 10330 52 9081 53 8290 54 7356 55 6851 56 6468 57 5948 58 5518 59 5129 60 4521 61 4089 62 3924 63 3748 64 3354 65 3142 66 2944 67 2840 68 2563 69 2346 70 2195 71 2152 72 2067 73 2043 74 1948 75 1819 76 1799 77 1719 78 1625 79 1630 80 1440 81 1428 82 1371 83 1330 84 1218 85 1158 86 1186 87 1139 88 1178 89 1090 90 1055 91 1061 92 1020 93 1041 94 986 95 1015 96 936 97 907 98 810 99 843 100 790 101 748 102 827 103 746 104 754 105 764 106 675 107 649 108 719 109 677 110 713 111 674 112 691 113 682 114 599 115 585 116 621 117 611 118 541 119 557 120 548 121 505 122 530 123 519 124 544 125 435 126 458 127 374 128 352 129 343 130 327 131 336 132 286 133 301 134 298 135 314 136 321 137 314 138 278 139 306 140 306 141 288 142 294 143 297 144 268 145 260 146 247 147 254 148 252 149 211 150 233 151 240 152 226 153 244 154 213 155 238 156 230 157 270 158 272 159 227 160 240 161 227 162 233 163 231 164 247 165 252 166 273 167 259 168 224 169 237 170 223 171 216 172 180 173 181 174 183 175 180 176 182 177 176 178 199 179 202 180 191 181 194 182 187 183 154 184 157 185 171 186 158 187 193 188 146 189 167 190 155 191 140 192 127 193 123 194 90 195 96 196 102 197 90 198 89 199 76 200 60 201 71 202 54 203 55 204 43 205 57 206 54 207 53 208 75 209 49 210 54 211 59 212 45 213 42 214 42 215 74 216 54 217 57 218 51 219 50 220 67 221 59 222 65 223 72 224 59 225 57 226 67 227 52 228 73 229 63 230 57 231 41 232 48 233 64 234 48 235 54 236 56 237 53 238 58 239 51 240 65 241 73 242 57 243 72 244 77 245 52 246 59 247 51 248 48 249 45 250 4190