#SentieonCommandLine: /lustre8/home/ykawai-tnproj-pg/packages/sentieon-genomics-201911/libexec/driver -t 8 -r /lustre8/home/ncbn-pg/data/resource/Homo_sapiens_assembly38.fasta --interval /lustre8/home/ncbn-pg/data/resource/picard-interval-list/GRCh38.autosome-PAR.interval_list -i SGDP/LP6005592-DNA_F01.hs38DH/LP6005592-DNA_F01.hs38DH.cram --algo WgsMetricsAlgo --min_map_qual 0 SGDP/LP6005592-DNA_F01.hs38DH/QCmetrics/LP6005592-DNA_F01.hs38DH.WgsMetrics.autosome.txt GENOME_TERRITORY MEAN_COVERAGE SD_COVERAGE MEDIAN_COVERAGE MAD_COVERAGE PCT_EXC_MAPQ PCT_EXC_DUPE PCT_EXC_UNPAIRED PCT_EXC_BASEQ PCT_EXC_OVERLAP PCT_EXC_CAPPED PCT_EXC_TOTAL PCT_1X PCT_5X PCT_10X PCT_15X PCT_20X PCT_25X PCT_30X PCT_40X PCT_50X PCT_60X PCT_70X PCT_80X PCT_90X PCT_100X HET_SNP_SENSITIVITY HET_SNP_Q 2747965384 37.735 11.799 37 5 0 0.022409 0.0011924 0.065158 0.0064361 0.012892 0.10809 0.99885 0.99685 0.99418 0.98963 0.97776 0.94064 0.83872 0.39324 0.070163 0.011916 0.0068689 0.0051993 0.0040703 0.0032461 0.99775 26 coverage high_quality_coverage_count 0 3170987 1 1524973 2 1343566 3 1308965 4 1309078 5 1327235 6 1373102 7 1438840 8 1531341 9 1660344 10 1838736 11 2080535 12 2394141 13 2818780 14 3364245 15 4075148 16 4990699 17 6173118 18 7705748 19 9687341 20 12218665 21 15428084 22 19464388 23 24434354 24 30465449 25 37601893 26 45828617 27 55115004 28 65338646 29 76167346 30 87324225 31 98407725 32 108993535 33 118612708 34 126774171 35 133134055 36 137360461 37 139195274 38 138650159 39 135723274 40 130627358 41 123626371 42 115045888 43 105313429 44 94840503 45 84052945 46 73367681 47 63039391 48 53368928 49 44521534 50 36632283 51 29736643 52 23834461 53 18868123 54 14784906 55 11475410 56 8838887 57 6773321 58 5165110 59 3952010 60 3032793 61 2348026 62 1845805 63 1475254 64 1208910 65 1014440 66 870184 67 764449 68 685756 69 624103 70 578395 71 539712 72 508053 73 481060 74 458707 75 437489 76 420427 77 402772 78 387381 79 374030 80 359566 81 347139 82 333955 83 323962 84 312864 85 303772 86 294658 87 284423 88 275817 89 266402 90 258862 91 250460 92 243193 93 235824 94 228759 95 223680 96 216263 97 209159 98 203199 99 195448 100 190644 101 182724 102 176760 103 171385 104 165603 105 161154 106 155626 107 151276 108 147028 109 143383 110 138149 111 133949 112 129959 113 125429 114 121748 115 117423 116 113358 117 109791 118 106817 119 103400 120 99256 121 96519 122 93811 123 90828 124 87974 125 85172 126 82554 127 80014 128 77624 129 75453 130 73838 131 71431 132 69223 133 68130 134 66797 135 64894 136 63336 137 62169 138 60228 139 59142 140 57638 141 56610 142 55504 143 53868 144 52268 145 51150 146 49955 147 48919 148 48221 149 46879 150 46033 151 44838 152 44068 153 43151 154 42088 155 41524 156 40879 157 39785 158 38738 159 37832 160 37090 161 36744 162 36104 163 35014 164 34743 165 34122 166 33220 167 32725 168 31748 169 31535 170 30928 171 30642 172 29956 173 29310 174 28747 175 28438 176 28189 177 27567 178 26671 179 26693 180 26192 181 25645 182 25482 183 25027 184 24333 185 24224 186 23848 187 23481 188 23023 189 22794 190 22164 191 21990 192 21771 193 21461 194 20962 195 20682 196 20342 197 20178 198 19660 199 19481 200 19197 201 18821 202 18532 203 18119 204 18317 205 17666 206 17575 207 17484 208 16903 209 16902 210 16628 211 16425 212 16045 213 15716 214 15668 215 15457 216 14886 217 15016 218 14915 219 14670 220 14479 221 14666 222 14315 223 14046 224 13969 225 13689 226 13652 227 13473 228 13118 229 12910 230 12881 231 12542 232 12590 233 12279 234 12126 235 12062 236 11910 237 11663 238 11755 239 11552 240 11443 241 11227 242 11161 243 10986 244 10768 245 10620 246 10516 247 10575 248 10112 249 10187 250 1821009