#SentieonCommandLine: /lustre8/home/ykawai-tnproj-pg/packages/sentieon-genomics-201911/libexec/driver -t 8 -r /lustre8/home/ncbn-pg/data/resource/Homo_sapiens_assembly38.fasta --interval /lustre8/home/ncbn-pg/data/resource/picard-interval-list/GRCh38.chrX.interval_list -i SGDP/LP6005592-DNA_F01.hs38DH/LP6005592-DNA_F01.hs38DH.cram --algo WgsMetricsAlgo --min_map_qual 0 SGDP/LP6005592-DNA_F01.hs38DH/QCmetrics/LP6005592-DNA_F01.hs38DH.WgsMetrics.chrX.txt
GENOME_TERRITORY	MEAN_COVERAGE	SD_COVERAGE	MEDIAN_COVERAGE	MAD_COVERAGE	PCT_EXC_MAPQ	PCT_EXC_DUPE	PCT_EXC_UNPAIRED	PCT_EXC_BASEQ	PCT_EXC_OVERLAP	PCT_EXC_CAPPED	PCT_EXC_TOTAL	PCT_1X	PCT_5X	PCT_10X	PCT_15X	PCT_20X	PCT_25X	PCT_30X	PCT_40X	PCT_50X	PCT_60X	PCT_70X	PCT_80X	PCT_90X	PCT_100X	HET_SNP_SENSITIVITY	HET_SNP_Q	
152114341	36.726	8.6396	37	5	0	0.017414	0.0011231	0.061097	0.0063088	0.0001368	0.08608	0.99945	0.99823	0.99559	0.99041	0.97778	0.93893	0.83024	0.35834	0.049861	0.0050622	0.0019308	0.0010897	0.00068069	0.00047024	0.99873	29	

coverage	high_quality_coverage_count	
0	83138
1	40956
2	42925
3	48429
4	54290
5	61881
6	69880
7	78933
8	89664
9	101285
10	115668
11	131551
12	153927
13	178453
14	208557
15	247592
16	298714
17	364518
18	450103
19	559392
20	706459
21	890662
22	1124294
23	1415407
24	1772565
25	2198831
26	2690261
27	3248006
28	3874312
29	4522060
30	5200415
31	5866388
32	6496499
33	7049569
34	7508710
35	7838904
36	8039316
37	8084825
38	7973468
39	7724185
40	7347962
41	6850874
42	6278318
43	5650659
44	4994331
45	4333311
46	3701626
47	3108285
48	2567978
49	2091375
50	1676799
51	1326869
52	1031830
53	794157
54	603055
55	453953
56	340404
57	255156
58	189932
59	142447
60	106706
61	81713
62	63226
63	50354
64	41438
65	34450
66	29590
67	25850
68	22709
69	20285
70	18068
71	16593
72	15005
73	13852
74	12791
75	11875
76	11122
77	10298
78	9487
79	8856
80	8372
81	7627
82	7153
83	6828
84	6360
85	5888
86	5570
87	5153
88	4829
89	4437
90	4090
91	3823
92	3440
93	3285
94	3268
95	3087
96	2930
97	2873
98	2666
99	2551
100	2336
101	2248
102	2063
103	2028
104	1839
105	1863
106	1730
107	1656
108	1569
109	1463
110	1430
111	1269
112	1272
113	1205
114	1166
115	1046
116	1035
117	994
118	885
119	970
120	862
121	862
122	876
123	800
124	816
125	766
126	728
127	701
128	692
129	701
130	684
131	640
132	604
133	579
134	601
135	558
136	551
137	491
138	500
139	437
140	457
141	478
142	422
143	393
144	431
145	398
146	382
147	397
148	345
149	365
150	393
151	321
152	319
153	325
154	302
155	311
156	320
157	331
158	288
159	293
160	292
161	283
162	302
163	267
164	268
165	285
166	249
167	248
168	251
169	238
170	239
171	230
172	194
173	204
174	205
175	201
176	209
177	184
178	218
179	199
180	204
181	181
182	167
183	182
184	197
185	155
186	180
187	179
188	180
189	194
190	150
191	139
192	157
193	147
194	160
195	139
196	143
197	121
198	146
199	128
200	136
201	135
202	120
203	126
204	124
205	153
206	141
207	143
208	139
209	159
210	130
211	130
212	136
213	97
214	157
215	132
216	127
217	109
218	108
219	117
220	128
221	117
222	123
223	88
224	101
225	112
226	111
227	99
228	101
229	94
230	101
231	94
232	98
233	87
234	111
235	106
236	106
237	91
238	85
239	83
240	74
241	73
242	82
243	84
244	76
245	73
246	84
247	91
248	69
249	55
250	7312