#SentieonCommandLine: /lustre8/home/ykawai-tnproj-pg/packages/sentieon-genomics-201911/libexec/driver -t 8 -r /lustre8/home/ncbn-pg/data/resource/Homo_sapiens_assembly38.fasta --interval /lustre8/home/ncbn-pg/data/resource/picard-interval-list/GRCh38.chrX.interval_list -i SGDP/LP6005619-DNA_C01.hs38DH/LP6005619-DNA_C01.hs38DH.cram --algo WgsMetricsAlgo --min_map_qual 0 SGDP/LP6005619-DNA_C01.hs38DH/QCmetrics/LP6005619-DNA_C01.hs38DH.WgsMetrics.chrX.txt GENOME_TERRITORY MEAN_COVERAGE SD_COVERAGE MEDIAN_COVERAGE MAD_COVERAGE PCT_EXC_MAPQ PCT_EXC_DUPE PCT_EXC_UNPAIRED PCT_EXC_BASEQ PCT_EXC_OVERLAP PCT_EXC_CAPPED PCT_EXC_TOTAL PCT_1X PCT_5X PCT_10X PCT_15X PCT_20X PCT_25X PCT_30X PCT_40X PCT_50X PCT_60X PCT_70X PCT_80X PCT_90X PCT_100X HET_SNP_SENSITIVITY HET_SNP_Q 152114341 23.776 6.8442 24 4 0 0.013457 0.0020159 0.061685 0.0060491 0.00022501 0.083431 0.99904 0.99596 0.98558 0.93878 0.76447 0.44261 0.16229 0.0094962 0.0023824 0.0012121 0.00076667 0.00053906 0.00040999 0.00031917 0.99678 25 coverage high_quality_coverage_count 0 146625 1 88785 2 102457 3 124188 4 152882 5 186740 6 229865 7 289384 8 374270 9 498205 10 680481 11 934564 12 1293306 13 1787227 14 2422966 15 3215980 16 4168353 17 5233651 18 6380016 19 7517929 20 8574630 21 9452024 22 10082464 23 10423017 24 10427305 25 10119639 26 9515012 27 8682177 28 7696312 29 6627710 30 5550583 31 4530728 32 3613771 33 2811522 34 2136333 35 1586122 36 1161960 37 835814 38 594860 39 419976 40 295077 41 210222 42 151630 43 110625 44 83518 45 65643 46 52946 47 43963 48 36926 49 31561 50 28068 51 24689 52 22314 53 20212 54 17896 55 15877 56 14152 57 12902 58 11408 59 10503 60 9670 61 8710 62 8231 63 7357 64 6689 65 6069 66 5630 67 5369 68 5203 69 4826 70 4549 71 4248 72 3959 73 3692 74 3521 75 3370 76 3208 77 2809 78 2699 79 2569 80 2411 81 2301 82 2130 83 2065 84 1917 85 1865 86 1810 87 1846 88 1669 89 1619 90 1610 91 1531 92 1452 93 1421 94 1363 95 1412 96 1302 97 1341 98 1238 99 1144 100 1192 101 1134 102 1080 103 999 104 1038 105 966 106 1007 107 958 108 885 109 924 110 816 111 858 112 799 113 748 114 717 115 727 116 620 117 673 118 657 119 593 120 579 121 558 122 587 123 583 124 561 125 540 126 556 127 493 128 503 129 481 130 433 131 409 132 382 133 409 134 370 135 390 136 364 137 336 138 342 139 305 140 338 141 381 142 355 143 307 144 333 145 300 146 299 147 290 148 284 149 279 150 273 151 265 152 278 153 316 154 246 155 242 156 244 157 261 158 269 159 230 160 252 161 227 162 219 163 218 164 219 165 222 166 204 167 230 168 221 169 216 170 196 171 200 172 153 173 206 174 196 175 181 176 167 177 173 178 163 179 149 180 153 181 170 182 169 183 159 184 189 185 163 186 201 187 151 188 138 189 153 190 152 191 126 192 138 193 134 194 157 195 122 196 134 197 124 198 100 199 118 200 105 201 103 202 111 203 114 204 95 205 111 206 98 207 83 208 124 209 104 210 96 211 99 212 89 213 100 214 109 215 97 216 80 217 101 218 80 219 93 220 86 221 89 222 95 223 102 224 75 225 66 226 80 227 87 228 75 229 80 230 72 231 83 232 79 233 82 234 76 235 98 236 69 237 66 238 66 239 65 240 74 241 55 242 54 243 53 244 66 245 54 246 53 247 53 248 55 249 68 250 5058