#SentieonCommandLine: /lustre8/home/ykawai-tnproj-pg/packages/sentieon-genomics-201911/libexec/driver -t 8 -r /lustre8/home/ncbn-pg/data/resource/Homo_sapiens_assembly38.fasta --interval /lustre8/home/ncbn-pg/data/resource/picard-interval-list/GRCh38.chrX.interval_list -i SGDP/LP6005677-DNA_A02.hs38DH/LP6005677-DNA_A02.hs38DH.cram --algo WgsMetricsAlgo --min_map_qual 0 SGDP/LP6005677-DNA_A02.hs38DH/QCmetrics/LP6005677-DNA_A02.hs38DH.WgsMetrics.chrX.txt
GENOME_TERRITORY	MEAN_COVERAGE	SD_COVERAGE	MEDIAN_COVERAGE	MAD_COVERAGE	PCT_EXC_MAPQ	PCT_EXC_DUPE	PCT_EXC_UNPAIRED	PCT_EXC_BASEQ	PCT_EXC_OVERLAP	PCT_EXC_CAPPED	PCT_EXC_TOTAL	PCT_1X	PCT_5X	PCT_10X	PCT_15X	PCT_20X	PCT_25X	PCT_30X	PCT_40X	PCT_50X	PCT_60X	PCT_70X	PCT_80X	PCT_90X	PCT_100X	HET_SNP_SENSITIVITY	HET_SNP_Q	
152114341	36.198	8.7371	36	5	0	0.013627	0.00093981	0.040745	0.0038895	0.00011338	0.059314	0.9995	0.99802	0.99451	0.98809	0.97413	0.93419	0.81988	0.3283	0.040396	0.0047032	0.0022946	0.0014664	0.00099009	0.00070477	0.99864	29	

coverage	high_quality_coverage_count	
0	75592
1	43071
2	51163
3	59786
4	70990
5	81385
6	93541
7	105698
8	119961
9	134204
10	150427
11	169160
12	191235
13	216873
14	249183
15	292185
16	341843
17	405906
18	488224
19	594807
20	733981
21	915785
22	1150058
23	1450635
24	1824419
25	2279336
26	2809125
27	3415445
28	4085958
29	4799427
30	5528130
31	6245872
32	6901168
33	7475051
34	7922910
35	8218038
36	8343426
37	8303630
38	8099567
39	7738150
40	7254116
41	6667380
42	6008550
43	5317317
44	4618507
45	3937638
46	3302559
47	2716970
48	2208869
49	1762299
50	1390171
51	1078145
52	827299
53	625255
54	467339
55	347836
56	256931
57	190217
58	140997
59	105180
60	79501
61	61194
62	47957
63	38650
64	32023
65	26910
66	23759
67	20738
68	18720
69	16931
70	15902
71	15093
72	14457
73	13460
74	12837
75	12076
76	11485
77	10649
78	10237
79	9787
80	9188
81	8794
82	8027
83	7821
84	7423
85	6992
86	6594
87	6153
88	5792
89	5664
90	5280
91	5062
92	5030
93	4628
94	4374
95	4325
96	4012
97	3815
98	3522
99	3354
100	3285
101	3047
102	2793
103	2843
104	2732
105	2569
106	2597
107	2358
108	2150
109	2166
110	1998
111	1968
112	1901
113	1908
114	1818
115	1712
116	1663
117	1639
118	1505
119	1512
120	1454
121	1397
122	1412
123	1340
124	1285
125	1284
126	1135
127	1123
128	1052
129	1013
130	1004
131	1001
132	999
133	907
134	920
135	908
136	826
137	828
138	769
139	753
140	738
141	745
142	768
143	659
144	709
145	742
146	701
147	664
148	608
149	647
150	603
151	612
152	612
153	541
154	574
155	511
156	534
157	529
158	538
159	553
160	526
161	492
162	471
163	447
164	467
165	439
166	472
167	412
168	401
169	390
170	350
171	386
172	379
173	391
174	387
175	386
176	329
177	354
178	329
179	350
180	276
181	307
182	283
183	290
184	278
185	270
186	279
187	259
188	276
189	265
190	263
191	279
192	275
193	247
194	229
195	221
196	213
197	230
198	209
199	187
200	223
201	214
202	206
203	207
204	197
205	186
206	167
207	150
208	183
209	173
210	175
211	154
212	142
213	150
214	162
215	181
216	178
217	158
218	166
219	140
220	132
221	141
222	134
223	163
224	143
225	143
226	147
227	132
228	129
229	180
230	136
231	161
232	154
233	132
234	158
235	135
236	140
237	166
238	132
239	140
240	111
241	142
242	146
243	144
244	110
245	129
246	127
247	116
248	119
249	104
250	8091