#SentieonCommandLine: /lustre8/home/ykawai-tnproj-pg/packages/sentieon-genomics-201911/libexec/driver -t 8 -r /lustre8/home/ncbn-pg/data/resource/Homo_sapiens_assembly38.fasta --interval /lustre8/home/ncbn-pg/data/resource/picard-interval-list/GRCh38.chrY.interval_list -i SGDP/LP6005677-DNA_B02.hs38DH/LP6005677-DNA_B02.hs38DH.cram --algo WgsMetricsAlgo --min_map_qual 0 SGDP/LP6005677-DNA_B02.hs38DH/QCmetrics/LP6005677-DNA_B02.hs38DH.WgsMetrics.chrY.txt
GENOME_TERRITORY	MEAN_COVERAGE	SD_COVERAGE	MEDIAN_COVERAGE	MAD_COVERAGE	PCT_EXC_MAPQ	PCT_EXC_DUPE	PCT_EXC_UNPAIRED	PCT_EXC_BASEQ	PCT_EXC_OVERLAP	PCT_EXC_CAPPED	PCT_EXC_TOTAL	PCT_1X	PCT_5X	PCT_10X	PCT_15X	PCT_20X	PCT_25X	PCT_30X	PCT_40X	PCT_50X	PCT_60X	PCT_70X	PCT_80X	PCT_90X	PCT_100X	HET_SNP_SENSITIVITY	HET_SNP_Q	
23636355	24.615	25.483	21	4	0	0.057887	0.00096626	0.051322	0.0073362	0.31959	0.4371	0.99947	0.99734	0.98254	0.88268	0.5928	0.26678	0.10327	0.044359	0.031565	0.02446	0.020455	0.017905	0.016372	0.01529	0.9971	25	

coverage	high_quality_coverage_count	
0	12576
1	8857
2	10700
3	13286
4	17377
5	24378
6	36760
7	57954
8	90641
9	140193
10	211341
11	310746
12	439324
13	602689
14	796196
15	1010058
16	1219623
17	1409072
18	1558196
19	1654704
20	1693194
21	1671763
22	1586954
23	1457268
24	1296880
25	1112999
26	931042
27	755292
28	599676
29	465660
30	353569
31	267111
32	199950
33	150305
34	113290
35	88284
36	69806
37	57593
38	49346
39	43210
40	38945
41	35859
42	33754
43	32301
44	30862
45	29409
46	27732
47	26044
48	24453
49	23056
50	21712
51	20782
52	19572
53	18651
54	17155
55	15865
56	15054
57	13921
58	12869
59	12361
60	11746
61	10999
62	10490
63	9953
64	9610
65	9160
66	8850
67	8295
68	7876
69	7679
70	7338
71	7052
72	6932
73	6485
74	6206
75	5832
76	5602
77	5159
78	5074
79	4590
80	4546
81	4107
82	3952
83	3795
84	3613
85	3383
86	3415
87	3255
88	3127
89	3040
90	2993
91	2898
92	2804
93	2611
94	2618
95	2492
96	2367
97	2416
98	2191
99	2194
100	2141
101	2144
102	2076
103	2002
104	2020
105	1966
106	1983
107	1908
108	1874
109	1897
110	1857
111	1841
112	1671
113	1762
114	1776
115	1604
116	1697
117	1510
118	1582
119	1505
120	1468
121	1563
122	1504
123	1420
124	1456
125	1346
126	1357
127	1371
128	1259
129	1239
130	1299
131	1222
132	1256
133	1204
134	1227
135	1256
136	1230
137	1241
138	1260
139	1246
140	1274
141	1236
142	1143
143	1141
144	1120
145	1116
146	1142
147	1098
148	1115
149	1070
150	1040
151	1117
152	1068
153	1071
154	1082
155	1095
156	1061
157	981
158	1049
159	1073
160	1065
161	1053
162	1027
163	1005
164	1035
165	1102
166	1078
167	1088
168	1089
169	1045
170	1081
171	1043
172	1012
173	970
174	999
175	988
176	980
177	1002
178	946
179	969
180	883
181	910
182	926
183	995
184	929
185	949
186	860
187	902
188	909
189	874
190	884
191	878
192	873
193	1004
194	894
195	875
196	794
197	895
198	893
199	868
200	884
201	889
202	815
203	874
204	870
205	843
206	826
207	854
208	860
209	837
210	842
211	825
212	814
213	787
214	751
215	731
216	746
217	708
218	733
219	710
220	726
221	666
222	672
223	690
224	616
225	677
226	614
227	626
228	621
229	578
230	609
231	588
232	599
233	617
234	626
235	628
236	608
237	619
238	605
239	594
240	603
241	626
242	618
243	606
244	568
245	623
246	569
247	573
248	573
249	543
250	202806