#SentieonCommandLine: /lustre8/home/ykawai-tnproj-pg/packages/sentieon-genomics-201911/libexec/driver -t 8 -r /lustre8/home/ncbn-pg/data/resource/Homo_sapiens_assembly38.fasta --interval /lustre8/home/ncbn-pg/data/resource/picard-interval-list/GRCh38.chrX.interval_list -i SGDP/LP6005677-DNA_D01.hs38DH/LP6005677-DNA_D01.hs38DH.cram --algo WgsMetricsAlgo --min_map_qual 0 SGDP/LP6005677-DNA_D01.hs38DH/QCmetrics/LP6005677-DNA_D01.hs38DH.WgsMetrics.chrX.txt
GENOME_TERRITORY	MEAN_COVERAGE	SD_COVERAGE	MEDIAN_COVERAGE	MAD_COVERAGE	PCT_EXC_MAPQ	PCT_EXC_DUPE	PCT_EXC_UNPAIRED	PCT_EXC_BASEQ	PCT_EXC_OVERLAP	PCT_EXC_CAPPED	PCT_EXC_TOTAL	PCT_1X	PCT_5X	PCT_10X	PCT_15X	PCT_20X	PCT_25X	PCT_30X	PCT_40X	PCT_50X	PCT_60X	PCT_70X	PCT_80X	PCT_90X	PCT_100X	HET_SNP_SENSITIVITY	HET_SNP_Q	
152114341	18.491	5.6072	18	3	0	0.012519	0.0018602	0.036087	0.0045835	0.00013371	0.055184	0.99899	0.99435	0.96757	0.79397	0.40072	0.10667	0.018897	0.0025313	0.0010999	0.00066114	0.0004607	0.00034243	0.00026468	0.00021104	0.9946	23	

coverage	high_quality_coverage_count	
0	154161
1	119300
2	148846
3	188626
4	247825
5	329676
6	455685
7	665939
8	1023041
9	1600206
10	2441597
11	3599126
12	5064062
13	6758542
14	8542884
15	10233626
16	11630812
17	12526534
18	12854081
19	12574435
20	11749965
21	10519562
22	9042716
23	7462646
24	5954127
25	4574169
26	3405991
27	2458875
28	1726264
29	1186490
30	804510
31	539119
32	359914
33	243697
34	167935
35	119920
36	88713
37	67866
38	53457
39	44360
40	37874
41	32607
42	28445
43	24545
44	21215
45	18553
46	16270
47	14277
48	12745
49	11204
50	9876
51	9010
52	8153
53	7299
54	6608
55	6150
56	5553
57	4995
58	4795
59	4298
60	4045
61	3673
62	3446
63	3144
64	3121
65	2779
66	2775
67	2620
68	2507
69	2380
70	2208
71	2068
72	2128
73	1924
74	1806
75	1737
76	1638
77	1568
78	1439
79	1475
80	1375
81	1340
82	1273
83	1244
84	1186
85	1136
86	1190
87	1115
88	998
89	969
90	928
91	885
92	874
93	865
94	824
95	845
96	788
97	726
98	753
99	672
100	705
101	672
102	659
103	696
104	669
105	635
106	595
107	627
108	573
109	546
110	534
111	462
112	548
113	508
114	482
115	427
116	467
117	443
118	440
119	393
120	453
121	398
122	408
123	372
124	375
125	384
126	388
127	402
128	356
129	344
130	378
131	342
132	353
133	332
134	369
135	311
136	317
137	313
138	328
139	286
140	302
141	253
142	284
143	275
144	261
145	233
146	244
147	206
148	221
149	184
150	197
151	202
152	193
153	212
154	197
155	199
156	232
157	199
158	180
159	192
160	147
161	142
162	144
163	159
164	134
165	136
166	142
167	157
168	138
169	170
170	138
171	128
172	163
173	163
174	138
175	130
176	129
177	134
178	127
179	147
180	112
181	136
182	123
183	112
184	141
185	143
186	103
187	112
188	126
189	102
190	121
191	90
192	109
193	96
194	100
195	74
196	89
197	104
198	81
199	77
200	64
201	75
202	72
203	54
204	71
205	53
206	67
207	66
208	84
209	59
210	57
211	52
212	47
213	34
214	52
215	40
216	40
217	38
218	45
219	47
220	51
221	39
222	37
223	49
224	41
225	41
226	38
227	46
228	44
229	36
230	53
231	47
232	40
233	43
234	45
235	40
236	45
237	48
238	49
239	48
240	42
241	44
242	44
243	41
244	43
245	43
246	39
247	37
248	25
249	47
250	1927