#SentieonCommandLine: /lustre8/home/ykawai-tnproj-pg/packages/sentieon-genomics-201911/libexec/driver -t 8 -r /lustre8/home/ncbn-pg/data/resource/Homo_sapiens_assembly38.fasta --interval /lustre8/home/ncbn-pg/data/resource/picard-interval-list/GRCh38.autosome-PAR.interval_list -i SGDP/SS6004467.hs38DH/SS6004467.hs38DH.cram --algo WgsMetricsAlgo --min_map_qual 0 SGDP/SS6004467.hs38DH/QCmetrics/SS6004467.hs38DH.WgsMetrics.autosome.txt GENOME_TERRITORY MEAN_COVERAGE SD_COVERAGE MEDIAN_COVERAGE MAD_COVERAGE PCT_EXC_MAPQ PCT_EXC_DUPE PCT_EXC_UNPAIRED PCT_EXC_BASEQ PCT_EXC_OVERLAP PCT_EXC_CAPPED PCT_EXC_TOTAL PCT_1X PCT_5X PCT_10X PCT_15X PCT_20X PCT_25X PCT_30X PCT_40X PCT_50X PCT_60X PCT_70X PCT_80X PCT_90X PCT_100X HET_SNP_SENSITIVITY HET_SNP_Q 2747965384 36.446 13.306 36 6 0 0.047783 0.0018099 0.053892 0.0018678 0.017349 0.1227 0.99777 0.99435 0.98969 0.98101 0.95953 0.90178 0.77108 0.33792 0.072649 0.016499 0.008747 0.0063832 0.0049721 0.0040209 0.99589 24 coverage high_quality_coverage_count 0 6136533 1 2844848 2 2274681 3 2135044 4 2132503 5 2197981 6 2329077 7 2500124 8 2737226 9 3046243 10 3449717 11 3959961 12 4597863 13 5418479 14 6436967 15 7712638 16 9315965 17 11313185 18 13789742 19 16868526 20 20661995 21 25281512 22 30798599 23 37279964 24 44690134 25 53004648 26 62053455 27 71584714 28 81391872 29 91110235 30 100315908 31 108683961 32 115858187 33 121498322 34 125378691 35 127346908 36 127358766 37 125492918 38 121812415 39 116567689 40 110027428 41 102415909 42 94113681 43 85376491 44 76522646 45 67822077 46 59414270 47 51503078 48 44198617 49 37567028 50 31649085 51 26431717 52 21919351 53 18066329 54 14789270 55 12066018 56 9791009 57 7942817 58 6432715 59 5209496 60 4233618 61 3456476 62 2843187 63 2357220 64 1974557 65 1672617 66 1433533 67 1250094 68 1099666 69 980621 70 884587 71 805943 72 743632 73 692297 74 645010 75 606646 76 571059 77 540280 78 515513 79 490762 80 467867 81 446173 82 426519 83 408683 84 391528 85 376666 86 360131 87 346528 88 333685 89 319999 90 307081 91 296067 92 284148 93 274516 94 264562 95 254391 96 245819 97 237679 98 228878 99 220686 100 212132 101 205707 102 198027 103 191842 104 184874 105 179713 106 173508 107 168544 108 162700 109 158370 110 153994 111 148978 112 145839 113 142405 114 138194 115 135730 116 132248 117 128690 118 125122 119 122181 120 118737 121 116166 122 113351 123 110364 124 107116 125 104708 126 101658 127 100112 128 97386 129 94661 130 92877 131 90878 132 88387 133 86704 134 84440 135 82460 136 80323 137 78452 138 76735 139 74687 140 73303 141 71911 142 70187 143 68510 144 66832 145 65412 146 63722 147 62261 148 61152 149 59815 150 58313 151 57287 152 55982 153 55087 154 54096 155 53128 156 51718 157 50603 158 50166 159 49071 160 48221 161 47072 162 46389 163 45569 164 44633 165 43766 166 43243 167 42123 168 41825 169 40560 170 39743 171 39203 172 38190 173 37762 174 37337 175 36983 176 36292 177 35837 178 35434 179 34534 180 34058 181 33912 182 32906 183 32850 184 32319 185 31961 186 31270 187 31140 188 30597 189 30424 190 30016 191 29591 192 28980 193 29102 194 28311 195 28203 196 27731 197 27340 198 27077 199 26637 200 26182 201 25922 202 25305 203 25257 204 24613 205 24521 206 23990 207 23825 208 23473 209 23639 210 23249 211 22835 212 22639 213 22375 214 21863 215 21816 216 21540 217 21146 218 20688 219 20709 220 20391 221 20183 222 19627 223 19713 224 19567 225 19245 226 18881 227 18773 228 18329 229 18131 230 17920 231 17745 232 17573 233 17442 234 17042 235 16858 236 16836 237 16406 238 15989 239 16432 240 16187 241 15775 242 15466 243 15446 244 15243 245 14990 246 15050 247 14711 248 14358 249 14314 250 2342325