#SentieonCommandLine: /lustre8/home/ykawai-tnproj-pg/packages/sentieon-genomics-201911/libexec/driver -t 8 -r /lustre8/home/ncbn-pg/data/resource/Homo_sapiens_assembly38.fasta --interval /lustre8/home/ncbn-pg/data/resource/picard-interval-list/GRCh38.chrX.interval_list -i SGDP/SS6004467.hs38DH/SS6004467.hs38DH.cram --algo WgsMetricsAlgo --min_map_qual 0 SGDP/SS6004467.hs38DH/QCmetrics/SS6004467.hs38DH.WgsMetrics.chrX.txt GENOME_TERRITORY MEAN_COVERAGE SD_COVERAGE MEDIAN_COVERAGE MAD_COVERAGE PCT_EXC_MAPQ PCT_EXC_DUPE PCT_EXC_UNPAIRED PCT_EXC_BASEQ PCT_EXC_OVERLAP PCT_EXC_CAPPED PCT_EXC_TOTAL PCT_1X PCT_5X PCT_10X PCT_15X PCT_20X PCT_25X PCT_30X PCT_40X PCT_50X PCT_60X PCT_70X PCT_80X PCT_90X PCT_100X HET_SNP_SENSITIVITY HET_SNP_Q 152114341 18.175 6.1694 18 4 0 0.034199 0.0019951 0.049328 0.001888 4.6064e-05 0.087456 0.99827 0.99035 0.94553 0.74259 0.38292 0.1232 0.030047 0.0038411 0.001343 0.00063038 0.00037672 0.00026414 0.00019736 0.00015302 0.99125 21 coverage high_quality_coverage_count 0 263470 1 205041 2 253261 3 326073 4 420373 5 569987 6 813312 7 1188835 8 1740944 9 2504203 10 3509679 11 4733091 12 6117492 13 7569716 14 8939785 15 10100275 16 10948907 17 11371221 18 11363779 19 10926674 20 10154248 21 9127677 22 7956387 23 6729603 24 5539759 25 4453272 26 3492228 27 2685306 28 2031310 29 1507924 30 1110874 31 812886 32 587088 33 426879 34 314010 35 233138 36 176136 37 135074 38 105333 39 84806 40 69023 41 57491 42 48719 43 42048 44 36623 45 31715 46 27998 47 24496 48 22132 49 19752 50 17485 51 15280 52 13517 53 12284 54 10923 55 9631 56 8549 57 7484 58 6892 59 6353 60 5742 61 5218 62 4714 63 4208 64 3665 65 3534 66 3220 67 3008 68 2761 69 2516 70 2305 71 2192 72 1979 73 1851 74 1710 75 1581 76 1482 77 1442 78 1323 79 1259 80 1262 81 1137 82 1095 83 1129 84 1037 85 951 86 916 87 917 88 846 89 868 90 722 91 766 92 732 93 758 94 686 95 628 96 663 97 624 98 632 99 534 100 597 101 562 102 510 103 504 104 493 105 468 106 420 107 400 108 389 109 407 110 401 111 385 112 365 113 328 114 350 115 346 116 334 117 322 118 282 119 315 120 309 121 323 122 303 123 292 124 279 125 274 126 322 127 264 128 271 129 252 130 219 131 248 132 248 133 224 134 218 135 211 136 235 137 244 138 232 139 237 140 207 141 234 142 181 143 229 144 198 145 141 146 168 147 168 148 143 149 155 150 153 151 137 152 153 153 135 154 143 155 143 156 178 157 153 158 135 159 161 160 158 161 172 162 134 163 152 164 107 165 113 166 120 167 114 168 114 169 95 170 96 171 99 172 91 173 100 174 92 175 105 176 91 177 111 178 92 179 84 180 85 181 68 182 87 183 99 184 90 185 72 186 76 187 74 188 69 189 62 190 69 191 57 192 66 193 65 194 46 195 51 196 57 197 52 198 48 199 36 200 45 201 71 202 59 203 38 204 41 205 54 206 40 207 31 208 32 209 40 210 48 211 48 212 41 213 46 214 37 215 40 216 39 217 28 218 29 219 25 220 27 221 26 222 27 223 26 224 20 225 18 226 21 227 16 228 21 229 17 230 18 231 23 232 21 233 15 234 12 235 18 236 22 237 18 238 20 239 16 240 14 241 18 242 21 243 21 244 25 245 24 246 18 247 17 248 29 249 25 250 1564