#SentieonCommandLine: /lustre8/home/ykawai-tnproj-pg/packages/sentieon-genomics-201911/libexec/driver -t 8 -r /lustre8/home/ncbn-pg/data/resource/Homo_sapiens_assembly38.fasta --interval /lustre8/home/ncbn-pg/data/resource/picard-interval-list/GRCh38.chrX.interval_list -i SGDP/SS6004470.hs38DH/SS6004470.hs38DH.cram --algo WgsMetricsAlgo --min_map_qual 0 SGDP/SS6004470.hs38DH/QCmetrics/SS6004470.hs38DH.WgsMetrics.chrX.txt
GENOME_TERRITORY	MEAN_COVERAGE	SD_COVERAGE	MEDIAN_COVERAGE	MAD_COVERAGE	PCT_EXC_MAPQ	PCT_EXC_DUPE	PCT_EXC_UNPAIRED	PCT_EXC_BASEQ	PCT_EXC_OVERLAP	PCT_EXC_CAPPED	PCT_EXC_TOTAL	PCT_1X	PCT_5X	PCT_10X	PCT_15X	PCT_20X	PCT_25X	PCT_30X	PCT_40X	PCT_50X	PCT_60X	PCT_70X	PCT_80X	PCT_90X	PCT_100X	HET_SNP_SENSITIVITY	HET_SNP_Q	
152114341	17.864	6.2511	18	4	0	0.038722	0.001562	0.041854	0.0043311	9.5582e-05	0.086565	0.99799	0.98923	0.93861	0.72005	0.36114	0.11441	0.027809	0.0039201	0.0015806	0.00084918	0.00053683	0.00035719	0.00024236	0.00016971	0.99021	20	

coverage	high_quality_coverage_count	
0	306027
1	250377
2	285422
3	345327
4	450373
5	627245
6	910167
7	1343098
8	1977086
9	2843087
10	3935413
11	5227907
12	6651090
13	8072847
14	9358406
15	10388293
16	11073470
17	11342663
18	11168099
19	10623115
20	9775138
21	8703739
22	7526319
23	6334145
24	5191586
25	4150246
26	3256962
27	2497020
28	1880070
29	1389466
30	1016944
31	740085
32	538807
33	390634
34	285141
35	211105
36	157677
37	121321
38	95212
39	76906
40	62918
41	53024
42	45036
43	39135
44	34255
45	30261
46	26990
47	24042
48	21099
49	19118
50	16980
51	15495
52	13651
53	12246
54	10865
55	9884
56	9186
57	8278
58	7630
59	7040
60	6516
61	5825
62	5465
63	5020
64	4825
65	4498
66	4061
67	3951
68	3725
69	3628
70	3381
71	3228
72	2993
73	2806
74	2687
75	2626
76	2635
77	2404
78	2294
79	2272
80	2067
81	2051
82	1991
83	1878
84	1768
85	1674
86	1586
87	1565
88	1463
89	1424
90	1350
91	1364
92	1225
93	1268
94	1142
95	1046
96	1030
97	1018
98	828
99	779
100	742
101	769
102	733
103	711
104	640
105	643
106	538
107	581
108	561
109	525
110	555
111	547
112	579
113	557
114	490
115	447
116	420
117	427
118	447
119	415
120	378
121	412
122	369
123	360
124	352
125	334
126	339
127	350
128	300
129	278
130	266
131	251
132	266
133	245
134	250
135	244
136	264
137	218
138	234
139	214
140	222
141	194
142	197
143	184
144	174
145	139
146	162
147	138
148	114
149	130
150	146
151	104
152	119
153	95
154	109
155	118
156	128
157	124
158	108
159	106
160	98
161	95
162	101
163	83
164	74
165	73
166	74
167	93
168	95
169	75
170	86
171	71
172	76
173	83
174	88
175	65
176	67
177	85
178	76
179	76
180	69
181	61
182	68
183	60
184	71
185	66
186	58
187	49
188	63
189	63
190	65
191	51
192	52
193	70
194	57
195	45
196	41
197	54
198	44
199	46
200	34
201	44
202	41
203	37
204	28
205	41
206	31
207	43
208	30
209	40
210	24
211	29
212	33
213	26
214	27
215	27
216	32
217	21
218	22
219	29
220	41
221	30
222	35
223	35
224	32
225	24
226	16
227	21
228	20
229	12
230	27
231	23
232	15
233	28
234	18
235	15
236	31
237	22
238	20
239	23
240	20
241	20
242	30
243	25
244	26
245	21
246	20
247	11
248	21
249	18
250	1628