#SentieonCommandLine: /lustre8/home/ykawai-tnproj-pg/packages/sentieon-genomics-201911/libexec/driver -t 8 -r /lustre8/home/ncbn-pg/data/resource/Homo_sapiens_assembly38.fasta --interval /lustre8/home/ncbn-pg/data/resource/picard-interval-list/GRCh38.chrY.interval_list -i SGDP/SS6004470.hs38DH/SS6004470.hs38DH.cram --algo WgsMetricsAlgo --min_map_qual 0 SGDP/SS6004470.hs38DH/QCmetrics/SS6004470.hs38DH.WgsMetrics.chrY.txt
GENOME_TERRITORY	MEAN_COVERAGE	SD_COVERAGE	MEDIAN_COVERAGE	MAD_COVERAGE	PCT_EXC_MAPQ	PCT_EXC_DUPE	PCT_EXC_UNPAIRED	PCT_EXC_BASEQ	PCT_EXC_OVERLAP	PCT_EXC_CAPPED	PCT_EXC_TOTAL	PCT_1X	PCT_5X	PCT_10X	PCT_15X	PCT_20X	PCT_25X	PCT_30X	PCT_40X	PCT_50X	PCT_60X	PCT_70X	PCT_80X	PCT_90X	PCT_100X	HET_SNP_SENSITIVITY	HET_SNP_Q	
23636355	22.763	28.06	18	4	0	0.20296	0.00096322	0.027743	0.0015542	0.39498	0.6282	0.99905	0.99268	0.94554	0.74166	0.40538	0.169	0.080325	0.04651	0.037808	0.031254	0.026228	0.022902	0.020567	0.018716	0.99256	21	

coverage	high_quality_coverage_count	
0	22429
1	23048
2	29721
3	40378
4	57396
5	85871
6	130496
7	195759
8	289127
9	413075
10	572789
11	758006
12	963150
13	1167465
14	1357549
15	1506552
16	1606374
17	1649822
18	1625883
19	1559792
20	1440442
21	1287166
22	1123757
23	950429
24	785372
25	635533
26	507928
27	400602
28	310897
29	240948
30	184793
31	142561
32	110653
33	86810
34	68816
35	56217
36	46694
37	39288
38	33676
39	29755
40	26545
41	24373
42	22487
43	21173
44	20149
45	19424
46	18435
47	18234
48	17648
49	17233
50	16819
51	16421
52	15952
53	15701
54	15416
55	15629
56	15219
57	15021
58	14458
59	14259
60	13901
61	13339
62	12717
63	12511
64	11868
65	11610
66	11148
67	10944
68	10633
69	10142
70	9551
71	9209
72	8615
73	8302
74	7951
75	7528
76	7294
77	6848
78	6706
79	6593
80	6189
81	5978
82	5669
83	5583
84	5585
85	5406
86	5362
87	5237
88	5150
89	5042
90	4861
91	4827
92	4618
93	4510
94	4400
95	4191
96	4218
97	4095
98	4086
99	3953
100	3718
101	3692
102	3492
103	3632
104	3582
105	3446
106	3319
107	3248
108	3146
109	3041
110	2992
111	2907
112	2872
113	2879
114	2834
115	2782
116	2621
117	2510
118	2406
119	2271
120	2317
121	2177
122	2163
123	2103
124	2044
125	1937
126	1947
127	1925
128	1882
129	1790
130	1752
131	1724
132	1713
133	1662
134	1639
135	1522
136	1537
137	1501
138	1551
139	1490
140	1475
141	1464
142	1465
143	1478
144	1448
145	1394
146	1436
147	1380
148	1348
149	1361
150	1307
151	1328
152	1309
153	1215
154	1224
155	1139
156	1213
157	1188
158	1144
159	1141
160	1137
161	1191
162	1165
163	1161
164	1118
165	1121
166	1108
167	1090
168	1119
169	1112
170	1050
171	1037
172	1104
173	1012
174	1025
175	1027
176	1033
177	1005
178	994
179	948
180	910
181	997
182	909
183	902
184	917
185	921
186	884
187	934
188	896
189	959
190	903
191	934
192	912
193	907
194	857
195	912
196	873
197	886
198	874
199	905
200	825
201	890
202	845
203	815
204	860
205	800
206	832
207	777
208	788
209	794
210	772
211	741
212	731
213	709
214	710
215	739
216	693
217	712
218	719
219	668
220	685
221	717
222	701
223	629
224	624
225	643
226	649
227	588
228	571
229	587
230	569
231	611
232	561
233	636
234	574
235	600
236	545
237	615
238	636
239	593
240	609
241	581
242	637
243	555
244	595
245	586
246	621
247	570
248	565
249	586
250	244739