#SentieonCommandLine: /lustre8/home/ykawai-tnproj-pg/packages/sentieon-genomics-201911/libexec/driver -t 8 -r /lustre8/home/ncbn-pg/data/resource/Homo_sapiens_assembly38.fasta --interval /lustre8/home/ncbn-pg/data/resource/picard-interval-list/GRCh38.chrX.interval_list -i SGDP/SS6004474.hs38DH/SS6004474.hs38DH.cram --algo WgsMetricsAlgo --min_map_qual 0 SGDP/SS6004474.hs38DH/QCmetrics/SS6004474.hs38DH.WgsMetrics.chrX.txt
GENOME_TERRITORY	MEAN_COVERAGE	SD_COVERAGE	MEDIAN_COVERAGE	MAD_COVERAGE	PCT_EXC_MAPQ	PCT_EXC_DUPE	PCT_EXC_UNPAIRED	PCT_EXC_BASEQ	PCT_EXC_OVERLAP	PCT_EXC_CAPPED	PCT_EXC_TOTAL	PCT_1X	PCT_5X	PCT_10X	PCT_15X	PCT_20X	PCT_25X	PCT_30X	PCT_40X	PCT_50X	PCT_60X	PCT_70X	PCT_80X	PCT_90X	PCT_100X	HET_SNP_SENSITIVITY	HET_SNP_Q	
152114341	18.474	6.432	18	4	0	0.043975	0.00086952	0.028192	0.0029607	0.00017606	0.076173	0.99838	0.99075	0.94979	0.75862	0.40479	0.13503	0.032488	0.0037003	0.0014445	0.00080315	0.00054516	0.00040954	0.00032832	0.00026833	0.99189	21	

coverage	high_quality_coverage_count	
0	246890
1	207824
2	248952
3	310572
4	393311
5	532079
6	747451
7	1086480
8	1581766
9	2282330
10	3227539
11	4400073
12	5737950
13	7166631
14	8546863
15	9752318
16	10648840
17	11176641
18	11278471
19	10966955
20	10309818
21	9393670
22	8291475
23	7112721
24	5927273
25	4819258
26	3825536
27	2979208
28	2272323
29	1701162
30	1254738
31	912406
32	659304
33	471746
34	339144
35	246168
36	179268
37	134283
38	102486
39	79552
40	63545
41	52797
42	44377
43	37572
44	32564
45	28140
46	25030
47	22156
48	19662
49	17296
50	15317
51	13308
52	11930
53	10834
54	9694
55	8797
56	7830
57	6959
58	6769
59	6119
60	5458
61	5046
62	4687
63	4250
64	3984
65	3556
66	3440
67	3169
68	2959
69	2694
70	2573
71	2382
72	2375
73	2130
74	2065
75	2012
76	1961
77	1844
78	1647
79	1641
80	1568
81	1397
82	1407
83	1343
84	1220
85	1179
86	1045
87	1122
88	1070
89	1004
90	979
91	1011
92	922
93	916
94	903
95	868
96	930
97	885
98	879
99	832
100	796
101	706
102	761
103	727
104	684
105	685
106	706
107	638
108	622
109	670
110	575
111	568
112	595
113	566
114	580
115	591
116	584
117	554
118	529
119	511
120	459
121	463
122	470
123	507
124	516
125	536
126	437
127	433
128	383
129	421
130	394
131	354
132	347
133	351
134	304
135	321
136	327
137	305
138	310
139	330
140	322
141	299
142	330
143	308
144	318
145	271
146	260
147	269
148	285
149	263
150	217
151	224
152	222
153	270
154	244
155	234
156	206
157	207
158	223
159	234
160	201
161	192
162	191
163	200
164	189
165	163
166	136
167	150
168	153
169	146
170	164
171	122
172	135
173	134
174	146
175	158
176	112
177	129
178	140
179	133
180	125
181	119
182	120
183	118
184	109
185	122
186	149
187	115
188	131
189	106
190	135
191	137
192	144
193	143
194	128
195	129
196	120
197	114
198	118
199	127
200	117
201	95
202	111
203	123
204	121
205	97
206	108
207	114
208	130
209	119
210	109
211	106
212	100
213	101
214	100
215	90
216	118
217	102
218	84
219	108
220	105
221	88
222	98
223	75
224	85
225	94
226	72
227	88
228	75
229	72
230	69
231	62
232	69
233	73
234	82
235	57
236	62
237	63
238	70
239	62
240	56
241	64
242	68
243	67
244	65
245	73
246	65
247	48
248	67
249	46
250	5099