#SentieonCommandLine: /lustre8/home/ykawai-tnproj-pg/packages/sentieon-genomics-201911/libexec/driver -t 8 -r /lustre8/home/ncbn-pg/data/resource/Homo_sapiens_assembly38.fasta --interval /lustre8/home/ncbn-pg/data/resource/picard-interval-list/GRCh38.autosome-PAR.interval_list -i SGDP/SS6004476.hs38DH/SS6004476.hs38DH.cram --algo WgsMetricsAlgo --min_map_qual 0 SGDP/SS6004476.hs38DH/QCmetrics/SS6004476.hs38DH.WgsMetrics.autosome.txt GENOME_TERRITORY MEAN_COVERAGE SD_COVERAGE MEDIAN_COVERAGE MAD_COVERAGE PCT_EXC_MAPQ PCT_EXC_DUPE PCT_EXC_UNPAIRED PCT_EXC_BASEQ PCT_EXC_OVERLAP PCT_EXC_CAPPED PCT_EXC_TOTAL PCT_1X PCT_5X PCT_10X PCT_15X PCT_20X PCT_25X PCT_30X PCT_40X PCT_50X PCT_60X PCT_70X PCT_80X PCT_90X PCT_100X HET_SNP_SENSITIVITY HET_SNP_Q 2747965384 35.34 13.262 35 6 0 0.054978 0.00093625 0.029988 0.0044383 0.020582 0.11092 0.9977 0.99422 0.98959 0.98074 0.95594 0.88301 0.72593 0.28901 0.06144 0.015443 0.0086159 0.0063198 0.0049395 0.0040138 0.99582 24 coverage high_quality_coverage_count 0 6327879 1 2928531 2 2313081 3 2164430 4 2140521 5 2201367 6 2305227 7 2480132 8 2712689 9 3020238 10 3435097 11 3958603 12 4654177 13 5555141 14 6740486 15 8283889 16 10297916 17 12893945 18 16235554 19 20428340 20 25567886 21 31794170 22 39085058 23 47387683 24 56575013 25 66395095 26 76575535 27 86725785 28 96485327 29 105461298 30 113270284 31 119580895 32 124149184 33 126886948 34 127663892 35 126562202 36 123660583 37 119170474 38 113314303 39 106381223 40 98621524 41 90367654 42 81858752 43 73317007 44 64973918 45 56993203 46 49500310 47 42595691 48 36348048 49 30783651 50 25856763 51 21562491 52 17874278 53 14744607 54 12093077 55 9890465 56 8065781 57 6572374 58 5359020 59 4379641 60 3590579 61 2963951 62 2461306 63 2068550 64 1751832 65 1507488 66 1308741 67 1153824 68 1027402 69 927147 70 844155 71 777515 72 717482 73 670472 74 629005 75 591232 76 561642 77 532320 78 505715 79 480060 80 459009 81 439079 82 418048 83 400582 84 382376 85 367401 86 352985 87 337307 88 325741 89 310616 90 299800 91 287689 92 277714 93 268058 94 256881 95 247424 96 238908 97 229599 98 222509 99 215022 100 207727 101 201918 102 195166 103 189389 104 183883 105 178277 106 171764 107 168062 108 162157 109 158781 110 154639 111 149908 112 144949 113 142693 114 139214 115 135872 116 131148 117 128033 118 124760 119 121298 120 118942 121 116009 122 113370 123 110853 124 107852 125 104888 126 102751 127 100033 128 98534 129 96065 130 93390 131 91686 132 89614 133 88003 134 85867 135 83193 136 82016 137 80505 138 78809 139 76310 140 74826 141 73442 142 72165 143 70335 144 69053 145 66842 146 66050 147 65131 148 62757 149 61667 150 60727 151 59818 152 58569 153 57500 154 55904 155 54982 156 53796 157 52524 158 51474 159 50625 160 49427 161 48561 162 47182 163 46755 164 46070 165 45047 166 44561 167 43261 168 42559 169 41727 170 41265 171 40733 172 39857 173 39120 174 38350 175 37408 176 36782 177 36837 178 36478 179 35501 180 35120 181 34631 182 33752 183 33161 184 33116 185 32604 186 32073 187 31194 188 30729 189 30607 190 29733 191 29793 192 29435 193 28833 194 28887 195 28139 196 28013 197 27182 198 27169 199 26546 200 26140 201 25714 202 25028 203 25066 204 24621 205 24591 206 23951 207 23816 208 23428 209 23039 210 22736 211 22191 212 22122 213 21890 214 21628 215 21458 216 20999 217 20782 218 20365 219 19883 220 19533 221 19576 222 19093 223 19151 224 18749 225 18517 226 18205 227 17791 228 18012 229 17664 230 17400 231 17090 232 16985 233 16742 234 16479 235 16381 236 16367 237 15949 238 15650 239 15268 240 15336 241 15099 242 14929 243 14706 244 14994 245 14598 246 14392 247 14015 248 13959 249 14129 250 2278962