#SentieonCommandLine: /lustre8/home/ykawai-tnproj-pg/packages/sentieon-genomics-201911/libexec/driver -t 8 -r /lustre8/home/ncbn-pg/data/resource/Homo_sapiens_assembly38.fasta --interval /lustre8/home/ncbn-pg/data/resource/picard-interval-list/GRCh38.chrX.interval_list -i SGDP/SS6004476.hs38DH/SS6004476.hs38DH.cram --algo WgsMetricsAlgo --min_map_qual 0 SGDP/SS6004476.hs38DH/QCmetrics/SS6004476.hs38DH.WgsMetrics.chrX.txt GENOME_TERRITORY MEAN_COVERAGE SD_COVERAGE MEDIAN_COVERAGE MAD_COVERAGE PCT_EXC_MAPQ PCT_EXC_DUPE PCT_EXC_UNPAIRED PCT_EXC_BASEQ PCT_EXC_OVERLAP PCT_EXC_CAPPED PCT_EXC_TOTAL PCT_1X PCT_5X PCT_10X PCT_15X PCT_20X PCT_25X PCT_30X PCT_40X PCT_50X PCT_60X PCT_70X PCT_80X PCT_90X PCT_100X HET_SNP_SENSITIVITY HET_SNP_Q 152114341 17.353 6.1769 17 4 0 0.040403 0.0010346 0.027494 0.0045001 0.00010022 0.073532 0.99846 0.9904 0.93409 0.68783 0.32008 0.094927 0.023036 0.0034991 0.0013926 0.00074697 0.00049521 0.00035865 0.00027136 0.00020976 0.99082 20 coverage high_quality_coverage_count 0 234595 1 205970 2 248919 3 324916 4 445476 5 635446 6 964225 7 1474957 8 2231238 9 3260056 10 4549199 11 6014796 12 7563700 13 9037877 14 10293559 15 11205287 16 11639125 17 11608500 18 11143753 19 10343971 20 9273821 21 8065132 22 6817699 23 5603118 24 4489228 25 3521030 26 2709829 27 2050990 28 1527835 29 1125912 30 820687 31 599128 32 434119 33 317604 34 234673 35 175987 36 134230 37 104503 38 83622 39 67364 40 55943 41 47181 42 40619 43 35813 44 31045 45 27636 46 24416 47 21468 48 19102 49 17204 50 15339 51 13617 52 12183 53 10864 54 9792 55 9006 56 7874 57 7240 58 6447 59 5851 60 5270 61 4900 62 4611 63 4071 64 3855 65 3621 66 3280 67 3078 68 2882 69 2729 70 2630 71 2518 72 2287 73 2320 74 2100 75 1943 76 1917 77 1794 78 1633 79 1630 80 1537 81 1411 82 1415 83 1348 84 1321 85 1343 86 1286 87 1233 88 1214 89 1170 90 1097 91 1036 92 1030 93 1022 94 966 95 932 96 897 97 810 98 811 99 770 100 785 101 736 102 709 103 693 104 711 105 731 106 685 107 628 108 665 109 606 110 565 111 498 112 481 113 455 114 413 115 397 116 404 117 404 118 386 119 400 120 375 121 341 122 339 123 340 124 339 125 308 126 356 127 347 128 335 129 325 130 345 131 315 132 283 133 287 134 299 135 280 136 293 137 280 138 271 139 267 140 269 141 250 142 229 143 238 144 240 145 217 146 250 147 240 148 192 149 187 150 199 151 227 152 185 153 180 154 187 155 196 156 179 157 200 158 188 159 172 160 155 161 133 162 146 163 137 164 163 165 141 166 130 167 104 168 133 169 129 170 120 171 113 172 100 173 105 174 111 175 90 176 84 177 91 178 81 179 85 180 88 181 116 182 108 183 71 184 79 185 88 186 71 187 79 188 89 189 95 190 96 191 87 192 99 193 79 194 69 195 83 196 77 197 92 198 87 199 82 200 91 201 75 202 86 203 67 204 96 205 103 206 71 207 85 208 66 209 53 210 66 211 63 212 52 213 71 214 63 215 64 216 50 217 65 218 65 219 62 220 64 221 77 222 54 223 54 224 55 225 66 226 48 227 52 228 60 229 53 230 46 231 57 232 68 233 47 234 44 235 31 236 50 237 46 238 45 239 48 240 57 241 44 242 40 243 52 244 51 245 49 246 55 247 48 248 51 249 45 250 2948