#SentieonCommandLine: /lustre8/home/ykawai-tnproj-pg/packages/sentieon-genomics-201911/libexec/driver -t 8 -r /lustre8/home/ncbn-pg/data/resource/Homo_sapiens_assembly38.fasta --interval /lustre8/home/ncbn-pg/data/resource/picard-interval-list/GRCh38.autosome-PAR.interval_list -i SGDP/SS6004477.hs38DH/SS6004477.hs38DH.cram --algo WgsMetricsAlgo --min_map_qual 0 SGDP/SS6004477.hs38DH/QCmetrics/SS6004477.hs38DH.WgsMetrics.autosome.txt GENOME_TERRITORY MEAN_COVERAGE SD_COVERAGE MEDIAN_COVERAGE MAD_COVERAGE PCT_EXC_MAPQ PCT_EXC_DUPE PCT_EXC_UNPAIRED PCT_EXC_BASEQ PCT_EXC_OVERLAP PCT_EXC_CAPPED PCT_EXC_TOTAL PCT_1X PCT_5X PCT_10X PCT_15X PCT_20X PCT_25X PCT_30X PCT_40X PCT_50X PCT_60X PCT_70X PCT_80X PCT_90X PCT_100X HET_SNP_SENSITIVITY HET_SNP_Q 2747965384 40.946 14.298 40 7 0 0.029706 0.0007874 0.038152 0.0020554 0.018137 0.088838 0.99807 0.99503 0.99118 0.98509 0.97198 0.93894 0.86104 0.52801 0.18935 0.046975 0.013947 0.0075453 0.0055168 0.0043571 0.99642 24 coverage high_quality_coverage_count 0 5300667 1 2496562 2 2054012 3 1920840 4 1897729 5 1918758 6 1983354 7 2084715 8 2212933 9 2379947 10 2607779 11 2885311 12 3250680 13 3707569 14 4273998 15 4980421 16 5855969 17 6941072 18 8292110 19 9955880 20 12015009 21 14527086 22 17567977 23 21201372 24 25474640 25 30426503 26 36046564 27 42296571 28 49047711 29 56250897 30 63672682 31 71236694 32 78594867 33 85611234 34 92040568 35 97687650 36 102370174 37 105975301 38 108399808 39 109558778 40 109475466 41 108191757 42 105780728 43 102378867 44 98078393 45 93083153 46 87519950 47 81601828 48 75409057 49 69108994 50 62853211 51 56729355 52 50839678 53 45240846 54 40001470 55 35176212 56 30738669 57 26701669 58 23091415 59 19877650 60 17029925 61 14542936 62 12371884 63 10487914 64 8875549 65 7499163 66 6325600 67 5334611 68 4496613 69 3794436 70 3206724 71 2715113 72 2306560 73 1972359 74 1689163 75 1457628 76 1270452 77 1113566 78 983226 79 876965 80 786361 81 712156 82 649953 83 597164 84 554337 85 514266 86 479565 87 451957 88 424831 89 403783 90 384740 91 366788 92 349755 93 335065 94 321675 95 308574 96 295630 97 284822 98 275029 99 264514 100 254506 101 245772 102 237331 103 227469 104 219201 105 212547 106 205143 107 198003 108 191119 109 184853 110 178949 111 173507 112 168926 113 164460 114 159503 115 153822 116 148682 117 143160 118 140187 119 134464 120 130727 121 126552 122 122443 123 119543 124 115276 125 111756 126 108717 127 106127 128 102212 129 99640 130 96869 131 93994 132 91974 133 89668 134 87522 135 85544 136 82330 137 81093 138 78935 139 76791 140 74619 141 72894 142 71134 143 69591 144 68132 145 66524 146 65157 147 63620 148 62086 149 60949 150 59556 151 58733 152 57424 153 56015 154 54906 155 53492 156 52938 157 52099 158 50663 159 49427 160 48917 161 48244 162 47357 163 46790 164 45605 165 44993 166 44284 167 43421 168 42863 169 42013 170 41658 171 40548 172 39992 173 39355 174 38851 175 38323 176 37741 177 37061 178 36521 179 36018 180 35554 181 35062 182 34550 183 33678 184 33467 185 33014 186 32409 187 32012 188 31493 189 31364 190 30606 191 30415 192 30065 193 29226 194 28815 195 28515 196 28239 197 28044 198 27551 199 27119 200 26757 201 26508 202 26360 203 25873 204 25533 205 24956 206 25133 207 24712 208 24213 209 23945 210 23769 211 23550 212 23349 213 23308 214 22751 215 21927 216 21715 217 21510 218 21380 219 20994 220 20761 221 20749 222 20267 223 20171 224 19907 225 19535 226 19579 227 19148 228 18954 229 18578 230 18288 231 18221 232 18056 233 17695 234 17449 235 17385 236 17057 237 16703 238 16378 239 16649 240 16350 241 16204 242 16070 243 15651 244 15674 245 15417 246 15429 247 14919 248 14804 249 14454 250 2537498