Ocypus olens genome assembly, chromosome: 9.
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Coleoptera; Polyphaga; Staphyliniformia; Staphylinidae; Staphylininae group; Staphylininae; Staphylinini; Ocypus.

Submitted (21-JUN-2021) to the INSDC. WELLCOME SANGER INSTITUTE, Tree of Life, Wellcome Genome Campus, Hinxton CB10 1SA, United Kingdom

Submitted (11-OCT-2022) to the INSDC. WELLCOME SANGER INSTITUTE, Tree of Life, Wellcome Genome Campus, Hinxton CB10 1SA, United Kingdom

The assembly icOcyOlen1.2 is based on 40x PacBio data, 10X Genomics\nChromium data, and Arima Hi-C data generated by the Darwin Tree of\nLife\nProject (https://www.darwintreeoflife.org/). The assembly process\nincluded\nthe following sequence of steps: initial PacBio assembly generation\nwith\nHifiasm, retained haplotig separation with purge_dups, short-read\npolishing\nusing FreeBayes-called variants from 10X Genomics Chromium reads\naligned\nwith LongRanger, and Hi-C based scaffolding with SALSA2. The\nmitochondrial\ngenome was assembled using MitoHiFi. Finally, the primary assembly\nwas\nanalysed and manually improved using gEVAL. Chromosome-scale\nscaffolds\nconfirmed by the Hi-C data have been named in order of size. Order\nand\norientation of scaffolds in the centromeric regions is less certain\nthan in\nthe rest of the assembly.

Ocypus olens genome assembly, chromosome: 10.

Ocypus olens genome assembly, chromosome: X.

Ocypus olens genome assembly, chromosome: 12.

Ocypus olens genome assembly, chromosome: 13.

Ocypus olens genome assembly, chromosome: 14.

Ocypus olens genome assembly, chromosome: 15.

Ocypus olens genome assembly, chromosome: 16.

Ocypus olens genome assembly, chromosome: 17.

Ocypus olens genome assembly, chromosome: 18.

Ocypus olens genome assembly, chromosome: 19.

Ocypus olens genome assembly, organelle: mitochondrion.

Bibio marci genome assembly, chromosome: 1.
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Nematocera; Bibionoidea; Bibionidae; Bibio.

Submitted (25-JUN-2021) to the INSDC. WELLCOME SANGER INSTITUTE, Tree of Life, Wellcome Genome Campus, Hinxton CB10 1SA, United Kingdom

The assembly idBibMarc1.2 is based on 53x PacBio data, 10X Genomics\nChromium data, and Arima Hi-C data generated by the Darwin Tree of\nLife\nProject (https://www.darwintreeoflife.org/). The assembly process\nincluded\nthe following sequence of steps: initial PacBio assembly generation\nwith\nHifiasm, retained haplotig separation with purge_dups, short-read\npolishing\nusing FreeBayes-called variants from 10X Genomics Chromium reads\naligned\nwith LongRanger, and Hi-C based scaffolding with SALSA2. The\nmitochondrial\ngenome was assembled using MitoHiFi. Finally, the primary assembly\nwas\nanalysed and manually improved using gEVAL. Chromosome-scale\nscaffolds\nconfirmed by the Hi-C data have been named in order of size.\nUnknown sex\nchromosome system, no Y found. X assembly has good contiguity and\ngood HiC\nlinking across scaffold gaps.

Bibio marci genome assembly, chromosome: 2.

Bibio marci genome assembly, chromosome: 3.

Bibio marci genome assembly, chromosome: 4.

Bibio marci genome assembly, chromosome: 5.

Bibio marci genome assembly, chromosome: X.

Bibio marci genome assembly, organelle: mitochondrion.
mitochondrion Bibio marci (St. Mark's fly)

Amphipyra berbera genome assembly, chromosome: Z.
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Lepidoptera; Glossata; Ditrysia; Noctuoidea; Noctuidae; Amphipyrinae; Amphipyra.

Submitted (05-FEB-2022) to the INSDC. WELLCOME SANGER INSTITUTE, Tree of Life, Wellcome Genome Campus, Hinxton CB10 1SA, United Kingdom

The assembly ilAmpBerb1.2 is based on 41x PacBio data, 10X Genomics\nChromium data, and Arima Hi-C data generated by the Darwin Tree of\nLife\nProject (https://www.darwintreeoflife.org/). The assembly process\nincluded\nthe following sequence of steps: initial PacBio assembly generation\nwith\nHifiasm, retained haplotig separation with purge_dups, short-read\npolishing\nusing FreeBayes-called variants from 10X Genomics Chromium reads\naligned\nwith LongRanger, and Hi-C based scaffolding with SALSA2. The\nmitochondrial\ngenome was assembled using MitoHifi. Finally, the assembly was\nanalysed and\nmanually improved using gEVAL. Chromosome-scale scaffolds confirmed\nby the\nHi-C data have been named in order of size.

Amphipyra berbera genome assembly, chromosome: 1.

Amphipyra berbera genome assembly, chromosome: 2.

Amphipyra berbera genome assembly, chromosome: 3.

Amphipyra berbera genome assembly, chromosome: 4.

Amphipyra berbera genome assembly, chromosome: 5.

Amphipyra berbera genome assembly, chromosome: 6.

Amphipyra berbera genome assembly, chromosome: 7.

Amphipyra berbera genome assembly, chromosome: 8.

Amphipyra berbera genome assembly, chromosome: 9.

Amphipyra berbera genome assembly, chromosome: 10.