Sarcophaga variegata genome assembly, chromosome: 3.
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Oestroidea; Sarcophagidae; Sarcophaga; Sarcophaga.

Submitted (26-FEB-2022) to the INSDC. WELLCOME SANGER INSTITUTE, Tree of Life, Wellcome Genome Campus, Hinxton CB10 1SA, United Kingdom

The assembly idSarVari1.1 is based on 35x PacBio data, 10X Genomics\nChromium data, and Arima Hi-C data generated by the Darwin Tree of\nLife\nProject (https://www.darwintreeoflife.org/). The assembly process\nincluded\nthe following sequence of steps: initial PacBio assembly generation\nwith\nHifiasm, retained haplotig separation with purge_dups, short-read\npolishing\nusing FreeBayes-called variants from 10X Genomics Chromium reads\naligned\nwith LongRanger, and Hi-C based scaffolding with SALSA2. The\nmitochondrial\ngenome was assembled using MitoHifi. Finally, the assembly was\nanalysed and\nmanually improved using rapid curation. Chromosome-scale scaffolds\nconfirmed by the Hi-C data have been named in order of size. Order\nand\norientation of scaffolds is uncertain, chromosome 4 53.2-62.5mb,\nchromosome\n5 39.1-41.2mb.

Sarcophaga variegata genome assembly, chromosome: 4.

Sarcophaga variegata genome assembly, chromosome: 5.

Sarcophaga variegata genome assembly, chromosome: X.

Sarcophaga variegata genome assembly, chromosome: Y.

Sarcophaga variegata genome assembly, organelle: mitochondrion.

Leucozona laternaria genome assembly, chromosome: 1.
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Syrphoidea; Syrphidae; Syrphinae; Syrphini; Leucozona.

Submitted (11-OCT-2022) to the INSDC. WELLCOME SANGER INSTITUTE, Tree of Life, Wellcome Genome Campus, Hinxton CB10 1SA, United Kingdom

The assembly idLeuLate1.2 is based on 25x PacBio data, 10X Genomics\nChromium data, and Arima2 Hi-C data generated by the Darwin Tree of\nLife\nProject (https://www.darwintreeoflife.org/). The assembly process\nincluded\nthe following sequence of steps: initial PacBio assembly generation\nwith\nHifiasm, retained haplotig separation with purge_dups, short-read\npolishing\nusing FreeBayes-called variants from 10X Genomics Chromium reads\naligned\nwith LongRanger, and Hi-C based scaffolding with YaHS. The\nmitochondrial\ngenome was assembled using MitoHiFi. Finally, the primary assembly\nwas\nanalysed and manually improved using rapid curation.\nChromosome-scale\nscaffolds are named by synteny based on Chrysotoxum bicinctum\n(flies)\nGCA_911387755.1.

Leucozona laternaria genome assembly, chromosome: 2.

Leucozona laternaria genome assembly, chromosome: 3.

Leucozona laternaria genome assembly, chromosome: 4.

Leucozona laternaria genome assembly, chromosome: X.

Leucozona laternaria genome assembly, organelle: mitochondrion.

Diarsia rubi genome assembly, chromosome: Z.
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Lepidoptera; Glossata; Ditrysia; Noctuoidea; Noctuidae; Noctuinae; Noctuini; Diarsia.
The assembly ilDiaRubi1.1 is based on 33x PacBio data, 10X Genomics\nChromium data, and Arima2 Hi-C data generated by the Darwin Tree of\nLife\nProject (https://www.darwintreeoflife.org/). The assembly process\nincluded\nthe following sequence of steps: initial PacBio assembly generation\nwith\nHifiasm, retained haplotig separation with purge_dups, short-read\npolishing\nusing FreeBayes-called variants from 10X Genomics Chromium reads\naligned\nwith LongRanger, and Hi-C based scaffolding with YaHS. The\nmitochondrial\ngenome was assembled using MitoHifi. Finally, the assembly was\nanalysed and\nmanually improved using rapid curation. Chromosome-scale scaffolds\nconfirmed by the Hi-C data have been named in order of size.

Diarsia rubi genome assembly, chromosome: 1.

Diarsia rubi genome assembly, chromosome: 2.

Diarsia rubi genome assembly, chromosome: 3.

Diarsia rubi genome assembly, chromosome: 4.

Diarsia rubi genome assembly, chromosome: 5.