Apeira syringaria genome assembly, chromosome: 27.
type: Entry
definition: Apeira syringaria genome assembly, chromosome: 27.
sequence version: OW203681.1
sequence date: 2022-03-26
sequence: sequence
division: INV
source: Apeira syringaria
organism: Apeira syringaria
taxonomy: Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Lepidoptera; Glossata; Ditrysia; Geometroidea; Geometridae; Ennominae; Apeira.
reference: 1
comment: The assembly ilApeSyri1.1 is based on 49x PacBio data and Arima\nHi-C data\ngenerated by the Darwin Tree of Life Project\n(https://www.darwintreeoflife.org/). The assembly process included\nthe\nfollowing sequence of steps: initial PacBio assembly generation\nwith\nHifiasm, retained haplotig separation with purge_dups, and Hi-C\nbased\nscaffolding with YaHS. The mitochondrial genome was assembled using\nMitoHiFi. Finally, the assembly was analysed and manually improved\nusing\nrapid curation. Chromosome-scale scaffolds confirmed by the Hi-C\ndata have\nbeen named in order of size.

sequence
subclass of: SO_0000001
sequence length: 9637230
topology: linear
RO_0000086: SO_0000987
location: 1..9637230
location: region:1-9637230:1
RO_0002162: 934915

1
journal: Submitted (19-MAR-2022) to the INSDC. WELLCOME SANGER INSTITUTE, Tree of Life, Wellcome Genome Campus, Hinxton CB10 1SA, United Kingdom

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9637230:1
position: 9637230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-9637230:1:source
BFO_0000050: sequence
organism: Apeira syringaria
chromosome: 27
mol type: genomic DNA

934915
type: Taxonomy
SIO_000068: taxonomy

Apeira syringaria genome assembly, chromosome: 28.
type: Entry
definition: Apeira syringaria genome assembly, chromosome: 28.
sequence version: OW203682.1
sequence date: 2022-03-26
sequence: sequence
division: INV
source: Apeira syringaria
organism: Apeira syringaria
taxonomy: Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Lepidoptera; Glossata; Ditrysia; Geometroidea; Geometridae; Ennominae; Apeira.
reference: 1
comment: The assembly ilApeSyri1.1 is based on 49x PacBio data and Arima\nHi-C data\ngenerated by the Darwin Tree of Life Project\n(https://www.darwintreeoflife.org/). The assembly process included\nthe\nfollowing sequence of steps: initial PacBio assembly generation\nwith\nHifiasm, retained haplotig separation with purge_dups, and Hi-C\nbased\nscaffolding with YaHS. The mitochondrial genome was assembled using\nMitoHiFi. Finally, the assembly was analysed and manually improved\nusing\nrapid curation. Chromosome-scale scaffolds confirmed by the Hi-C\ndata have\nbeen named in order of size.

sequence
subclass of: SO_0000001
sequence length: 9550509
topology: linear
RO_0000086: SO_0000987
location: 1..9550509
location: region:1-9550509:1
RO_0002162: 934915

1
journal: Submitted (19-MAR-2022) to the INSDC. WELLCOME SANGER INSTITUTE, Tree of Life, Wellcome Genome Campus, Hinxton CB10 1SA, United Kingdom

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9550509:1
position: 9550509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-9550509:1:source
BFO_0000050: sequence
organism: Apeira syringaria
chromosome: 28
mol type: genomic DNA

Apeira syringaria genome assembly, chromosome: 29.
type: Entry
definition: Apeira syringaria genome assembly, chromosome: 29.
sequence version: OW203683.1
sequence date: 2022-03-26
sequence: sequence
division: INV
source: Apeira syringaria
organism: Apeira syringaria
taxonomy: Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Lepidoptera; Glossata; Ditrysia; Geometroidea; Geometridae; Ennominae; Apeira.
reference: 1
comment: The assembly ilApeSyri1.1 is based on 49x PacBio data and Arima\nHi-C data\ngenerated by the Darwin Tree of Life Project\n(https://www.darwintreeoflife.org/). The assembly process included\nthe\nfollowing sequence of steps: initial PacBio assembly generation\nwith\nHifiasm, retained haplotig separation with purge_dups, and Hi-C\nbased\nscaffolding with YaHS. The mitochondrial genome was assembled using\nMitoHiFi. Finally, the assembly was analysed and manually improved\nusing\nrapid curation. Chromosome-scale scaffolds confirmed by the Hi-C\ndata have\nbeen named in order of size.

sequence
subclass of: SO_0000001
sequence length: 2780117
topology: linear
RO_0000086: SO_0000987
location: 1..2780117
location: region:1-2780117:1
RO_0002162: 934915

1
journal: Submitted (19-MAR-2022) to the INSDC. WELLCOME SANGER INSTITUTE, Tree of Life, Wellcome Genome Campus, Hinxton CB10 1SA, United Kingdom

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2780117:1
position: 2780117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-2780117:1:source
BFO_0000050: sequence
organism: Apeira syringaria
chromosome: 29
mol type: genomic DNA

Apeira syringaria genome assembly, organelle: mitochondrion.
type: Entry
definition: Apeira syringaria genome assembly, organelle: mitochondrion.
sequence version: OW203684.1
sequence date: 2022-03-26
sequence: sequence
division: INV
source: mitochondrion Apeira syringaria
organism: Apeira syringaria
taxonomy: Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Lepidoptera; Glossata; Ditrysia; Geometroidea; Geometridae; Ennominae; Apeira.
reference: 1
comment: The assembly ilApeSyri1.1 is based on 49x PacBio data and Arima\nHi-C data\ngenerated by the Darwin Tree of Life Project\n(https://www.darwintreeoflife.org/). The assembly process included\nthe\nfollowing sequence of steps: initial PacBio assembly generation\nwith\nHifiasm, retained haplotig separation with purge_dups, and Hi-C\nbased\nscaffolding with YaHS. The mitochondrial genome was assembled using\nMitoHiFi. Finally, the assembly was analysed and manually improved\nusing\nrapid curation. Chromosome-scale scaffolds confirmed by the Hi-C\ndata have\nbeen named in order of size.

sequence
subclass of: SO_0000001
sequence length: 15489
topology: linear
RO_0000086: SO_0000987
location: 1..15489
location: region:1-15489:1
RO_0002162: 934915

1
journal: Submitted (19-MAR-2022) to the INSDC. WELLCOME SANGER INSTITUTE, Tree of Life, Wellcome Genome Campus, Hinxton CB10 1SA, United Kingdom

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15489:1
position: 15489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-15489:1:source
BFO_0000050: sequence
organism: Apeira syringaria
organelle: mitochondrion
mol type: genomic DNA

Yponomeuta sedellus genome assembly, chromosome: Z.
type: Entry
definition: Yponomeuta sedellus genome assembly, chromosome: Z.
sequence version: OW203721.1
sequence date: 2022-03-27
sequence: sequence
division: INV
source: Yponomeuta sedellus
organism: Yponomeuta sedellus
taxonomy: Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Lepidoptera; Glossata; Ditrysia; Yponomeutoidea; Yponomeutidae; Yponomeutinae; Yponomeuta.
reference: 1
comment: The assembly ilYpoSedl1.1 is based on 31x PacBio data and Arima2\nHi-C data\ngenerated by the Darwin Tree of Life Project\n(https://www.darwintreeoflife.org/). The assembly process included\nthe\nfollowing sequence of steps: initial PacBio assembly generation\nwith\nHifiasm, retained haplotig separation with purge_dups, and Hi-C\nbased\nscaffolding with YaHS. The mitochondrial genome was assembled using\nMitoHiFi. Finally, the assembly was analysed and manually improved\nusing\nrapid curation. Chromosome-scale scaffolds confirmed by the Hi-C\ndata have\nbeen named in order of size.

sequence
subclass of: SO_0000001
sequence length: 27294112
topology: linear
RO_0000086: SO_0000987
location: 1..27294112
location: region:1-27294112:1
RO_0002162: 263933

1
journal: Submitted (19-MAR-2022) to the INSDC. WELLCOME SANGER INSTITUTE, Tree of Life, Wellcome Genome Campus, Hinxton CB10 1SA, United Kingdom

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:27294112:1
position: 27294112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-27294112:1:source
BFO_0000050: sequence
organism: Yponomeuta sedellus
chromosome: Z
mol type: genomic DNA

263933
type: Taxonomy
SIO_000068: taxonomy

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 703278..703477
location: region:703278-703477:1
BFO_0000051: feature:703278-703477:1:region
SIO_000974: 93ccbf42-608a-4ecf-bf6c-24ee8cc92697

position:703278:1
position: 703278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:703477:1
position: 703477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

93ccbf42-608a-4ecf-bf6c-24ee8cc92697
SIO_000300: 1
SIO_000628: feature:703278-703477:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 1960707..1960906
location: region:1960707-1960906:1
BFO_0000051: feature:1960707-1960906:1:region
SIO_000974: 477e5810-335f-4390-b7f4-6df50d914617

position:1960707:1
position: 1960707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1960906:1
position: 1960906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

477e5810-335f-4390-b7f4-6df50d914617
SIO_000300: 1
SIO_000628: feature:1960707-1960906:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 2048297..2048496
location: region:2048297-2048496:1
BFO_0000051: feature:2048297-2048496:1:region
SIO_000974: a8b6cbba-a0be-433d-a46b-582f817f1565

position:2048297:1
position: 2048297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2048496:1
position: 2048496
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

a8b6cbba-a0be-433d-a46b-582f817f1565
SIO_000300: 1
SIO_000628: feature:2048297-2048496:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 3460406..3460605
location: region:3460406-3460605:1
BFO_0000051: feature:3460406-3460605:1:region
SIO_000974: 52921d93-6a12-4691-851c-491756f381e9

position:3460406:1
position: 3460406
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3460605:1
position: 3460605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

52921d93-6a12-4691-851c-491756f381e9
SIO_000300: 1
SIO_000628: feature:3460406-3460605:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 5444106..5444305
location: region:5444106-5444305:1
BFO_0000051: feature:5444106-5444305:1:region
SIO_000974: 84f7c40a-be4a-46d5-bac1-cc6963b010f0

position:5444106:1
position: 5444106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5444305:1
position: 5444305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

84f7c40a-be4a-46d5-bac1-cc6963b010f0
SIO_000300: 1
SIO_000628: feature:5444106-5444305:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 7893725..7893924
location: region:7893725-7893924:1
BFO_0000051: feature:7893725-7893924:1:region
SIO_000974: 201f2259-cb69-4506-ab66-31c877a0efe3

position:7893725:1
position: 7893725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7893924:1
position: 7893924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

201f2259-cb69-4506-ab66-31c877a0efe3
SIO_000300: 1
SIO_000628: feature:7893725-7893924:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 7987053..7987252
location: region:7987053-7987252:1
BFO_0000051: feature:7987053-7987252:1:region
SIO_000974: 49403c2e-bca9-4fd3-9c0b-75e3de74dbc1

position:7987053:1
position: 7987053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7987252:1
position: 7987252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

49403c2e-bca9-4fd3-9c0b-75e3de74dbc1
SIO_000300: 1
SIO_000628: feature:7987053-7987252:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 8621534..8621733
location: region:8621534-8621733:1
BFO_0000051: feature:8621534-8621733:1:region
SIO_000974: 8551fb49-3f5e-485e-abab-23939d6a562a

position:8621534:1
position: 8621534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8621733:1
position: 8621733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

8551fb49-3f5e-485e-abab-23939d6a562a
SIO_000300: 1
SIO_000628: feature:8621534-8621733:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 11830675..11830874
location: region:11830675-11830874:1
BFO_0000051: feature:11830675-11830874:1:region
SIO_000974: 5bf8b3c4-cf4c-4254-8500-6d7761fd8400

position:11830675:1
position: 11830675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11830874:1
position: 11830874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

5bf8b3c4-cf4c-4254-8500-6d7761fd8400
SIO_000300: 1
SIO_000628: feature:11830675-11830874:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 11957044..11957243
location: region:11957044-11957243:1
BFO_0000051: feature:11957044-11957243:1:region
SIO_000974: 460add01-925c-49c2-88d0-5a82f165841f

position:11957044:1
position: 11957044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11957243:1
position: 11957243
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

460add01-925c-49c2-88d0-5a82f165841f
SIO_000300: 1
SIO_000628: feature:11957044-11957243:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 13486478..13486677
location: region:13486478-13486677:1
BFO_0000051: feature:13486478-13486677:1:region
SIO_000974: b0b23b7b-e260-458e-8e5a-d937bb7ea23d

position:13486478:1
position: 13486478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13486677:1
position: 13486677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

b0b23b7b-e260-458e-8e5a-d937bb7ea23d
SIO_000300: 1
SIO_000628: feature:13486478-13486677:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 14341897..14342096
location: region:14341897-14342096:1
BFO_0000051: feature:14341897-14342096:1:region
SIO_000974: 518c0198-6ec1-4014-b1dd-5fc4e92f4775

position:14341897:1
position: 14341897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14342096:1
position: 14342096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

518c0198-6ec1-4014-b1dd-5fc4e92f4775
SIO_000300: 1
SIO_000628: feature:14341897-14342096:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 16985014..16985213
location: region:16985014-16985213:1
BFO_0000051: feature:16985014-16985213:1:region
SIO_000974: a197f9c2-4546-4755-9e2d-ffc7746008d9

position:16985014:1
position: 16985014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16985213:1
position: 16985213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

a197f9c2-4546-4755-9e2d-ffc7746008d9
SIO_000300: 1
SIO_000628: feature:16985014-16985213:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 18337211..18337410
location: region:18337211-18337410:1
BFO_0000051: feature:18337211-18337410:1:region
SIO_000974: 7677698f-eb11-4ed9-8a25-f46b5270870f

position:18337211:1
position: 18337211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18337410:1
position: 18337410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

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SIO_000300: 1
SIO_000628: feature:18337211-18337410:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 21233699..21233898
location: region:21233699-21233898:1
BFO_0000051: feature:21233699-21233898:1:region
SIO_000974: 2946f8bd-c0f0-4703-825c-1377092163a3

position:21233699:1
position: 21233699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21233898:1
position: 21233898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

2946f8bd-c0f0-4703-825c-1377092163a3
SIO_000300: 1
SIO_000628: feature:21233699-21233898:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 21452472..21452671
location: region:21452472-21452671:1
BFO_0000051: feature:21452472-21452671:1:region
SIO_000974: 3e6af4dc-e1e5-463a-82f5-5eca167ca636

position:21452472:1
position: 21452472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21452671:1
position: 21452671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

3e6af4dc-e1e5-463a-82f5-5eca167ca636
SIO_000300: 1
SIO_000628: feature:21452472-21452671:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 22059296..22059495
location: region:22059296-22059495:1
BFO_0000051: feature:22059296-22059495:1:region
SIO_000974: b4a6a869-ffcb-457b-8535-6c891f83ea21

position:22059296:1
position: 22059296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22059495:1
position: 22059495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

b4a6a869-ffcb-457b-8535-6c891f83ea21
SIO_000300: 1
SIO_000628: feature:22059296-22059495:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 22353497..22353696
location: region:22353497-22353696:1
BFO_0000051: feature:22353497-22353696:1:region
SIO_000974: fc6a108c-728c-4c59-b208-c1575aab4633

position:22353497:1
position: 22353497
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22353696:1
position: 22353696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

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SIO_000300: 1
SIO_000628: feature:22353497-22353696:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 22451481..22451680
location: region:22451481-22451680:1
BFO_0000051: feature:22451481-22451680:1:region
SIO_000974: 46e91834-0bee-4334-ba8b-3339d92815ab

position:22451481:1
position: 22451481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22451680:1
position: 22451680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

46e91834-0bee-4334-ba8b-3339d92815ab
SIO_000300: 1
SIO_000628: feature:22451481-22451680:1:region

Yponomeuta sedellus genome assembly, chromosome: 1.
type: Entry
definition: Yponomeuta sedellus genome assembly, chromosome: 1.
sequence version: OW203722.1
sequence date: 2022-03-27
sequence: sequence
division: INV
source: Yponomeuta sedellus
organism: Yponomeuta sedellus
taxonomy: Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Lepidoptera; Glossata; Ditrysia; Yponomeutoidea; Yponomeutidae; Yponomeutinae; Yponomeuta.
reference: 1
comment: The assembly ilYpoSedl1.1 is based on 31x PacBio data and Arima2\nHi-C data\ngenerated by the Darwin Tree of Life Project\n(https://www.darwintreeoflife.org/). The assembly process included\nthe\nfollowing sequence of steps: initial PacBio assembly generation\nwith\nHifiasm, retained haplotig separation with purge_dups, and Hi-C\nbased\nscaffolding with YaHS. The mitochondrial genome was assembled using\nMitoHiFi. Finally, the assembly was analysed and manually improved\nusing\nrapid curation. Chromosome-scale scaffolds confirmed by the Hi-C\ndata have\nbeen named in order of size.

sequence
subclass of: SO_0000001
sequence length: 27075573
topology: linear
RO_0000086: SO_0000987
location: 1..27075573
location: region:1-27075573:1
RO_0002162: 263933

1
journal: Submitted (19-MAR-2022) to the INSDC. WELLCOME SANGER INSTITUTE, Tree of Life, Wellcome Genome Campus, Hinxton CB10 1SA, United Kingdom

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:27075573:1
position: 27075573
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-27075573:1:source
BFO_0000050: sequence
organism: Yponomeuta sedellus
chromosome: 1
mol type: genomic DNA

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 610001..610200
location: region:610001-610200:1
BFO_0000051: feature:610001-610200:1:region
SIO_000974: 60eb2679-f831-4efb-83f6-60ec1a6597f9

position:610001:1
position: 610001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:610200:1
position: 610200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

60eb2679-f831-4efb-83f6-60ec1a6597f9
SIO_000300: 1
SIO_000628: feature:610001-610200:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 644988..645187
location: region:644988-645187:1
BFO_0000051: feature:644988-645187:1:region
SIO_000974: 4605e691-0eed-4f38-8e47-a38a89daeb5b

position:644988:1
position: 644988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:645187:1
position: 645187
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

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SIO_000300: 1
SIO_000628: feature:644988-645187:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 1815188..1815387
location: region:1815188-1815387:1
BFO_0000051: feature:1815188-1815387:1:region
SIO_000974: 1e4ef53c-8a4f-4005-bc32-e6bbbeb4f57a

position:1815188:1
position: 1815188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1815387:1
position: 1815387
reference: sequence
type: ForwardStrandPosition
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SIO_000300: 1
SIO_000628: feature:1815188-1815387:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 2001716..2001915
location: region:2001716-2001915:1
BFO_0000051: feature:2001716-2001915:1:region
SIO_000974: c7a00d4a-4624-4f3b-a1b7-a58c1c63b5be

position:2001716:1
position: 2001716
reference: sequence
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position:2001915:1
position: 2001915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

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SIO_000300: 1
SIO_000628: feature:2001716-2001915:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 2688064..2688263
location: region:2688064-2688263:1
BFO_0000051: feature:2688064-2688263:1:region
SIO_000974: c330d50f-0f63-40f5-a2b6-a976aab5f8e0

position:2688064:1
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reference: sequence
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position:2688263:1
position: 2688263
reference: sequence
type: ForwardStrandPosition
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c330d50f-0f63-40f5-a2b6-a976aab5f8e0
SIO_000300: 1
SIO_000628: feature:2688064-2688263:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 3604803..3605002
location: region:3604803-3605002:1
BFO_0000051: feature:3604803-3605002:1:region
SIO_000974: a994d33e-d280-4e56-8da2-3518a4018639

position:3604803:1
position: 3604803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3605002:1
position: 3605002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

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SIO_000300: 1
SIO_000628: feature:3604803-3605002:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 3667667..3667866
location: region:3667667-3667866:1
BFO_0000051: feature:3667667-3667866:1:region
SIO_000974: f0fc8537-872c-4e10-adbc-d1a3e54d5675

position:3667667:1
position: 3667667
reference: sequence
type: ForwardStrandPosition
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position:3667866:1
position: 3667866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

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SIO_000300: 1
SIO_000628: feature:3667667-3667866:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 4382238..4382437
location: region:4382238-4382437:1
BFO_0000051: feature:4382238-4382437:1:region
SIO_000974: 577e6701-aa88-45d2-98cd-311f52e7095d

position:4382238:1
position: 4382238
reference: sequence
type: ForwardStrandPosition
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position:4382437:1
position: 4382437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

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SIO_000300: 1
SIO_000628: feature:4382238-4382437:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 6219291..6219490
location: region:6219291-6219490:1
BFO_0000051: feature:6219291-6219490:1:region
SIO_000974: d30c9a1e-9521-4076-8e9d-b2885a148e91

position:6219291:1
position: 6219291
reference: sequence
type: ForwardStrandPosition
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position:6219490:1
position: 6219490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

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SIO_000300: 1
SIO_000628: feature:6219291-6219490:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 6311563..6311762
location: region:6311563-6311762:1
BFO_0000051: feature:6311563-6311762:1:region
SIO_000974: 7bb0fc51-026c-45ec-a786-c99433b39b2f

position:6311563:1
position: 6311563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6311762:1
position: 6311762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

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SIO_000300: 1
SIO_000628: feature:6311563-6311762:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 6686103..6686302
location: region:6686103-6686302:1
BFO_0000051: feature:6686103-6686302:1:region
SIO_000974: 53054703-f151-494b-b38b-3ccedc9452dd

position:6686103:1
position: 6686103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6686302:1
position: 6686302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

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SIO_000300: 1
SIO_000628: feature:6686103-6686302:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 9098696..9098895
location: region:9098696-9098895:1
BFO_0000051: feature:9098696-9098895:1:region
SIO_000974: 588a0c8e-a926-4d1e-839c-83761b7b725e

position:9098696:1
position: 9098696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9098895:1
position: 9098895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

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SIO_000300: 1
SIO_000628: feature:9098696-9098895:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 10547588..10547787
location: region:10547588-10547787:1
BFO_0000051: feature:10547588-10547787:1:region
SIO_000974: 9f0729ed-6a8e-4443-a8f8-b427caa67dc7

position:10547588:1
position: 10547588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10547787:1
position: 10547787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

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SIO_000300: 1
SIO_000628: feature:10547588-10547787:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 12226596..12226795
location: region:12226596-12226795:1
BFO_0000051: feature:12226596-12226795:1:region
SIO_000974: e59a4bfb-674d-4be2-8eef-e1051911f9d2

position:12226596:1
position: 12226596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12226795:1
position: 12226795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

e59a4bfb-674d-4be2-8eef-e1051911f9d2
SIO_000300: 1
SIO_000628: feature:12226596-12226795:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 14537286..14537485
location: region:14537286-14537485:1
BFO_0000051: feature:14537286-14537485:1:region
SIO_000974: 32e43b4d-e616-4b05-9d73-da2946ff30c2

position:14537286:1
position: 14537286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14537485:1
position: 14537485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

32e43b4d-e616-4b05-9d73-da2946ff30c2
SIO_000300: 1
SIO_000628: feature:14537286-14537485:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 21089729..21089928
location: region:21089729-21089928:1
BFO_0000051: feature:21089729-21089928:1:region
SIO_000974: af14a585-2946-4378-b6d6-7fa1c6fc41ba

position:21089729:1
position: 21089729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21089928:1
position: 21089928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

af14a585-2946-4378-b6d6-7fa1c6fc41ba
SIO_000300: 1
SIO_000628: feature:21089729-21089928:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 22222679..22222878
location: region:22222679-22222878:1
BFO_0000051: feature:22222679-22222878:1:region
SIO_000974: a6a7a229-8584-49e9-ae3c-2a9146d4b50b

position:22222679:1
position: 22222679
reference: sequence
type: ForwardStrandPosition
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position: 22222878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

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SIO_000300: 1
SIO_000628: feature:22222679-22222878:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 23895451..23895650
location: region:23895451-23895650:1
BFO_0000051: feature:23895451-23895650:1:region
SIO_000974: 09e36063-806b-4648-8142-396c34b45ea0

position:23895451:1
position: 23895451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:23895650:1
position: 23895650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

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SIO_000300: 1
SIO_000628: feature:23895451-23895650:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 24102872..24103071
location: region:24102872-24103071:1
BFO_0000051: feature:24102872-24103071:1:region
SIO_000974: b7d83c3a-2f76-4c90-a7de-3d9357b7eb0f

position:24102872:1
position: 24102872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:24103071:1
position: 24103071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

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SIO_000300: 1
SIO_000628: feature:24102872-24103071:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 25333526..25333725
location: region:25333526-25333725:1
BFO_0000051: feature:25333526-25333725:1:region
SIO_000974: cd2d7e97-56bf-40b7-b865-64981c18ee93

position:25333526:1
position: 25333526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:25333725:1
position: 25333725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

cd2d7e97-56bf-40b7-b865-64981c18ee93
SIO_000300: 1
SIO_000628: feature:25333526-25333725:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 25774244..25774443
location: region:25774244-25774443:1
BFO_0000051: feature:25774244-25774443:1:region
SIO_000974: 49f87037-e003-4aea-8d02-d338c8a054c9

position:25774244:1
position: 25774244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:25774443:1
position: 25774443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

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SIO_000300: 1
SIO_000628: feature:25774244-25774443:1:region

Yponomeuta sedellus genome assembly, chromosome: 2.
type: Entry
definition: Yponomeuta sedellus genome assembly, chromosome: 2.
sequence version: OW203723.1
sequence date: 2022-03-27
sequence: sequence
division: INV
source: Yponomeuta sedellus
organism: Yponomeuta sedellus
taxonomy: Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Lepidoptera; Glossata; Ditrysia; Yponomeutoidea; Yponomeutidae; Yponomeutinae; Yponomeuta.
reference: 1
comment: The assembly ilYpoSedl1.1 is based on 31x PacBio data and Arima2\nHi-C data\ngenerated by the Darwin Tree of Life Project\n(https://www.darwintreeoflife.org/). The assembly process included\nthe\nfollowing sequence of steps: initial PacBio assembly generation\nwith\nHifiasm, retained haplotig separation with purge_dups, and Hi-C\nbased\nscaffolding with YaHS. The mitochondrial genome was assembled using\nMitoHiFi. Finally, the assembly was analysed and manually improved\nusing\nrapid curation. Chromosome-scale scaffolds confirmed by the Hi-C\ndata have\nbeen named in order of size.

sequence
subclass of: SO_0000001
sequence length: 26403109
topology: linear
RO_0000086: SO_0000987
location: 1..26403109
location: region:1-26403109:1
RO_0002162: 263933

1
journal: Submitted (19-MAR-2022) to the INSDC. WELLCOME SANGER INSTITUTE, Tree of Life, Wellcome Genome Campus, Hinxton CB10 1SA, United Kingdom

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:26403109:1
position: 26403109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-26403109:1:source
BFO_0000050: sequence
organism: Yponomeuta sedellus
chromosome: 2
mol type: genomic DNA

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 565050..565249
location: region:565050-565249:1
BFO_0000051: feature:565050-565249:1:region
SIO_000974: 2995f553-02af-4c61-9be1-7a4577d816de

position:565050:1
position: 565050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:565249:1
position: 565249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

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SIO_000300: 1
SIO_000628: feature:565050-565249:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 1248845..1249044
location: region:1248845-1249044:1
BFO_0000051: feature:1248845-1249044:1:region
SIO_000974: 5f2eed0e-3556-4cc9-b9a6-f53c10feeb4f

position:1248845:1
position: 1248845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1249044:1
position: 1249044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

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SIO_000300: 1
SIO_000628: feature:1248845-1249044:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 1628377..1628576
location: region:1628377-1628576:1
BFO_0000051: feature:1628377-1628576:1:region
SIO_000974: 99ae1c5f-9576-48f5-8d51-38520b7cc1c6

position:1628377:1
position: 1628377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1628576:1
position: 1628576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

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SIO_000300: 1
SIO_000628: feature:1628377-1628576:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 2760152..2760351
location: region:2760152-2760351:1
BFO_0000051: feature:2760152-2760351:1:region
SIO_000974: acd8a55d-193d-4959-8dd1-c2f81a46bb9b

position:2760152:1
position: 2760152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2760351:1
position: 2760351
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

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SIO_000300: 1
SIO_000628: feature:2760152-2760351:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 3109713..3109912
location: region:3109713-3109912:1
BFO_0000051: feature:3109713-3109912:1:region
SIO_000974: 7d3b1b3c-6f7b-48fc-b8b4-fd8b62430f59

position:3109713:1
position: 3109713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3109912:1
position: 3109912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

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SIO_000300: 1
SIO_000628: feature:3109713-3109912:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 6657096..6657295
location: region:6657096-6657295:1
BFO_0000051: feature:6657096-6657295:1:region
SIO_000974: 1c5fe77a-1e4c-4b05-ba95-438301e0764b

position:6657096:1
position: 6657096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6657295:1
position: 6657295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

1c5fe77a-1e4c-4b05-ba95-438301e0764b
SIO_000300: 1
SIO_000628: feature:6657096-6657295:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 7801012..7801211
location: region:7801012-7801211:1
BFO_0000051: feature:7801012-7801211:1:region
SIO_000974: 9e851c6c-a357-4dc3-a0dd-1b5cb8b7a426

position:7801012:1
position: 7801012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7801211:1
position: 7801211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

9e851c6c-a357-4dc3-a0dd-1b5cb8b7a426
SIO_000300: 1
SIO_000628: feature:7801012-7801211:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 8531916..8532115
location: region:8531916-8532115:1
BFO_0000051: feature:8531916-8532115:1:region
SIO_000974: f0125c39-cb08-4f87-bfe5-b8a36adc590d

position:8531916:1
position: 8531916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8532115:1
position: 8532115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

f0125c39-cb08-4f87-bfe5-b8a36adc590d
SIO_000300: 1
SIO_000628: feature:8531916-8532115:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 13697094..13697293
location: region:13697094-13697293:1
BFO_0000051: feature:13697094-13697293:1:region
SIO_000974: c6abb580-fdfa-47eb-a328-040d598414da

position:13697094:1
position: 13697094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13697293:1
position: 13697293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

c6abb580-fdfa-47eb-a328-040d598414da
SIO_000300: 1
SIO_000628: feature:13697094-13697293:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 14668369..14668568
location: region:14668369-14668568:1
BFO_0000051: feature:14668369-14668568:1:region
SIO_000974: 2a3196fb-cfc7-44ee-94d9-fb517ce747cf

position:14668369:1
position: 14668369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14668568:1
position: 14668568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

2a3196fb-cfc7-44ee-94d9-fb517ce747cf
SIO_000300: 1
SIO_000628: feature:14668369-14668568:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 15159538..15159737
location: region:15159538-15159737:1
BFO_0000051: feature:15159538-15159737:1:region
SIO_000974: 6e092fd3-c11e-494b-b8d3-382e13cb42af

position:15159538:1
position: 15159538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15159737:1
position: 15159737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

6e092fd3-c11e-494b-b8d3-382e13cb42af
SIO_000300: 1
SIO_000628: feature:15159538-15159737:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 18059738..18059937
location: region:18059738-18059937:1
BFO_0000051: feature:18059738-18059937:1:region
SIO_000974: c0d5a887-4c07-4bb1-a5f5-ce58fb206c02

position:18059738:1
position: 18059738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18059937:1
position: 18059937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

c0d5a887-4c07-4bb1-a5f5-ce58fb206c02
SIO_000300: 1
SIO_000628: feature:18059738-18059937:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 18149835..18150034
location: region:18149835-18150034:1
BFO_0000051: feature:18149835-18150034:1:region
SIO_000974: 52307f72-c66a-40a1-bbe2-1700a5ed58c2

position:18149835:1
position: 18149835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18150034:1
position: 18150034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

52307f72-c66a-40a1-bbe2-1700a5ed58c2
SIO_000300: 1
SIO_000628: feature:18149835-18150034:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 20611415..20611614
location: region:20611415-20611614:1
BFO_0000051: feature:20611415-20611614:1:region
SIO_000974: 8fbde72e-686d-46e6-ab50-6bf300384f21

position:20611415:1
position: 20611415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20611614:1
position: 20611614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

8fbde72e-686d-46e6-ab50-6bf300384f21
SIO_000300: 1
SIO_000628: feature:20611415-20611614:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 24449299..24449498
location: region:24449299-24449498:1
BFO_0000051: feature:24449299-24449498:1:region
SIO_000974: 37d9c6b8-2ab6-410c-bb36-5c9a92957251

position:24449299:1
position: 24449299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:24449498:1
position: 24449498
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

37d9c6b8-2ab6-410c-bb36-5c9a92957251
SIO_000300: 1
SIO_000628: feature:24449299-24449498:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 25414695..25414894
location: region:25414695-25414894:1
BFO_0000051: feature:25414695-25414894:1:region
SIO_000974: 03aaf81a-2dbb-48c7-adfb-8841a90a90a7

position:25414695:1
position: 25414695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:25414894:1
position: 25414894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

03aaf81a-2dbb-48c7-adfb-8841a90a90a7
SIO_000300: 1
SIO_000628: feature:25414695-25414894:1:region

Yponomeuta sedellus genome assembly, chromosome: 3.
type: Entry
definition: Yponomeuta sedellus genome assembly, chromosome: 3.
sequence version: OW203724.1
sequence date: 2022-03-27
sequence: sequence
division: INV
source: Yponomeuta sedellus
organism: Yponomeuta sedellus
taxonomy: Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Lepidoptera; Glossata; Ditrysia; Yponomeutoidea; Yponomeutidae; Yponomeutinae; Yponomeuta.
reference: 1
comment: The assembly ilYpoSedl1.1 is based on 31x PacBio data and Arima2\nHi-C data\ngenerated by the Darwin Tree of Life Project\n(https://www.darwintreeoflife.org/). The assembly process included\nthe\nfollowing sequence of steps: initial PacBio assembly generation\nwith\nHifiasm, retained haplotig separation with purge_dups, and Hi-C\nbased\nscaffolding with YaHS. The mitochondrial genome was assembled using\nMitoHiFi. Finally, the assembly was analysed and manually improved\nusing\nrapid curation. Chromosome-scale scaffolds confirmed by the Hi-C\ndata have\nbeen named in order of size.

sequence
subclass of: SO_0000001
sequence length: 26282666
topology: linear
RO_0000086: SO_0000987
location: 1..26282666
location: region:1-26282666:1
RO_0002162: 263933

1
journal: Submitted (19-MAR-2022) to the INSDC. WELLCOME SANGER INSTITUTE, Tree of Life, Wellcome Genome Campus, Hinxton CB10 1SA, United Kingdom

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:26282666:1
position: 26282666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-26282666:1:source
BFO_0000050: sequence
organism: Yponomeuta sedellus
chromosome: 3
mol type: genomic DNA

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 3305208..3305407
location: region:3305208-3305407:1
BFO_0000051: feature:3305208-3305407:1:region
SIO_000974: 9e584d00-e05c-4a65-a8c1-045bf55114d4

position:3305208:1
position: 3305208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3305407:1
position: 3305407
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

9e584d00-e05c-4a65-a8c1-045bf55114d4
SIO_000300: 1
SIO_000628: feature:3305208-3305407:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 3625110..3625309
location: region:3625110-3625309:1
BFO_0000051: feature:3625110-3625309:1:region
SIO_000974: 5a75611a-71b6-4206-bb8b-3fffbb9a43a3

position:3625110:1
position: 3625110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3625309:1
position: 3625309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

5a75611a-71b6-4206-bb8b-3fffbb9a43a3
SIO_000300: 1
SIO_000628: feature:3625110-3625309:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 4435194..4435393
location: region:4435194-4435393:1
BFO_0000051: feature:4435194-4435393:1:region
SIO_000974: e888aaa1-11d6-4ec8-a37b-e9409ae8a07c

position:4435194:1
position: 4435194
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4435393:1
position: 4435393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

e888aaa1-11d6-4ec8-a37b-e9409ae8a07c
SIO_000300: 1
SIO_000628: feature:4435194-4435393:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 4522773..4522972
location: region:4522773-4522972:1
BFO_0000051: feature:4522773-4522972:1:region
SIO_000974: c585209e-88f3-43ac-a307-7cdb830520a1

position:4522773:1
position: 4522773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4522972:1
position: 4522972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

c585209e-88f3-43ac-a307-7cdb830520a1
SIO_000300: 1
SIO_000628: feature:4522773-4522972:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 5513969..5514168
location: region:5513969-5514168:1
BFO_0000051: feature:5513969-5514168:1:region
SIO_000974: 2533b875-3d59-46c6-84c2-e57eed38992d

position:5513969:1
position: 5513969
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5514168:1
position: 5514168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

2533b875-3d59-46c6-84c2-e57eed38992d
SIO_000300: 1
SIO_000628: feature:5513969-5514168:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 8977587..8977786
location: region:8977587-8977786:1
BFO_0000051: feature:8977587-8977786:1:region
SIO_000974: ab31d80c-0c5c-4ddc-bd95-a0d2a0eb2d89

position:8977587:1
position: 8977587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8977786:1
position: 8977786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ab31d80c-0c5c-4ddc-bd95-a0d2a0eb2d89
SIO_000300: 1
SIO_000628: feature:8977587-8977786:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 9326134..9326333
location: region:9326134-9326333:1
BFO_0000051: feature:9326134-9326333:1:region
SIO_000974: da5082dc-316b-4f42-88dc-382f19f17707

position:9326134:1
position: 9326134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9326333:1
position: 9326333
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

da5082dc-316b-4f42-88dc-382f19f17707
SIO_000300: 1
SIO_000628: feature:9326134-9326333:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 10230973..10231172
location: region:10230973-10231172:1
BFO_0000051: feature:10230973-10231172:1:region
SIO_000974: aca0be32-06bf-4946-b2b8-2e5c00fc70c7

position:10230973:1
position: 10230973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10231172:1
position: 10231172
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

aca0be32-06bf-4946-b2b8-2e5c00fc70c7
SIO_000300: 1
SIO_000628: feature:10230973-10231172:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 12570443..12570642
location: region:12570443-12570642:1
BFO_0000051: feature:12570443-12570642:1:region
SIO_000974: fe9fe6ef-ec9a-4678-ac49-02a96955d3f7

position:12570443:1
position: 12570443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12570642:1
position: 12570642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

fe9fe6ef-ec9a-4678-ac49-02a96955d3f7
SIO_000300: 1
SIO_000628: feature:12570443-12570642:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 15440070..15440269
location: region:15440070-15440269:1
BFO_0000051: feature:15440070-15440269:1:region
SIO_000974: 7442fc5d-2db9-433b-802e-d4f156208464

position:15440070:1
position: 15440070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15440269:1
position: 15440269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

7442fc5d-2db9-433b-802e-d4f156208464
SIO_000300: 1
SIO_000628: feature:15440070-15440269:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 17456521..17456720
location: region:17456521-17456720:1
BFO_0000051: feature:17456521-17456720:1:region
SIO_000974: af99fb3c-bcfa-4d40-8fad-c442401b5cea

position:17456521:1
position: 17456521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17456720:1
position: 17456720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

af99fb3c-bcfa-4d40-8fad-c442401b5cea
SIO_000300: 1
SIO_000628: feature:17456521-17456720:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 20546824..20547023
location: region:20546824-20547023:1
BFO_0000051: feature:20546824-20547023:1:region
SIO_000974: f7208593-5363-4b2b-943e-3ddb69ad33f6

position:20546824:1
position: 20546824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20547023:1
position: 20547023
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

f7208593-5363-4b2b-943e-3ddb69ad33f6
SIO_000300: 1
SIO_000628: feature:20546824-20547023:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 21005238..21005437
location: region:21005238-21005437:1
BFO_0000051: feature:21005238-21005437:1:region
SIO_000974: a1f94083-4c23-4625-9053-028239672421

position:21005238:1
position: 21005238
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21005437:1
position: 21005437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

a1f94083-4c23-4625-9053-028239672421
SIO_000300: 1
SIO_000628: feature:21005238-21005437:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 21097701..21097900
location: region:21097701-21097900:1
BFO_0000051: feature:21097701-21097900:1:region
SIO_000974: 56a55f69-f31b-4cd0-b244-82b95a5124bb

position:21097701:1
position: 21097701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21097900:1
position: 21097900
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

56a55f69-f31b-4cd0-b244-82b95a5124bb
SIO_000300: 1
SIO_000628: feature:21097701-21097900:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 22833328..22833527
location: region:22833328-22833527:1
BFO_0000051: feature:22833328-22833527:1:region
SIO_000974: 7f2b98dc-a984-499a-a04b-980a121c76cb

position:22833328:1
position: 22833328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22833527:1
position: 22833527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

7f2b98dc-a984-499a-a04b-980a121c76cb
SIO_000300: 1
SIO_000628: feature:22833328-22833527:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 24326578..24326777
location: region:24326578-24326777:1
BFO_0000051: feature:24326578-24326777:1:region
SIO_000974: 82c093a7-ea11-4255-9dbc-cf918d475963

position:24326578:1
position: 24326578
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:24326777:1
position: 24326777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

82c093a7-ea11-4255-9dbc-cf918d475963
SIO_000300: 1
SIO_000628: feature:24326578-24326777:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 25283322..25283521
location: region:25283322-25283521:1
BFO_0000051: feature:25283322-25283521:1:region
SIO_000974: acae37ad-da9a-4d48-ac0e-406d420f4f97

position:25283322:1
position: 25283322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:25283521:1
position: 25283521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

acae37ad-da9a-4d48-ac0e-406d420f4f97
SIO_000300: 1
SIO_000628: feature:25283322-25283521:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 25538978..25539177
location: region:25538978-25539177:1
BFO_0000051: feature:25538978-25539177:1:region
SIO_000974: a0f638c5-0411-4f47-9ee0-286363b41719

position:25538978:1
position: 25538978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:25539177:1
position: 25539177
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

a0f638c5-0411-4f47-9ee0-286363b41719
SIO_000300: 1
SIO_000628: feature:25538978-25539177:1:region

Yponomeuta sedellus genome assembly, chromosome: 4.
type: Entry
definition: Yponomeuta sedellus genome assembly, chromosome: 4.
sequence version: OW203725.1
sequence date: 2022-03-27
sequence: sequence
division: INV
source: Yponomeuta sedellus
organism: Yponomeuta sedellus
taxonomy: Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Lepidoptera; Glossata; Ditrysia; Yponomeutoidea; Yponomeutidae; Yponomeutinae; Yponomeuta.
reference: 1
comment: The assembly ilYpoSedl1.1 is based on 31x PacBio data and Arima2\nHi-C data\ngenerated by the Darwin Tree of Life Project\n(https://www.darwintreeoflife.org/). The assembly process included\nthe\nfollowing sequence of steps: initial PacBio assembly generation\nwith\nHifiasm, retained haplotig separation with purge_dups, and Hi-C\nbased\nscaffolding with YaHS. The mitochondrial genome was assembled using\nMitoHiFi. Finally, the assembly was analysed and manually improved\nusing\nrapid curation. Chromosome-scale scaffolds confirmed by the Hi-C\ndata have\nbeen named in order of size.

sequence
subclass of: SO_0000001
sequence length: 25987500
topology: linear
RO_0000086: SO_0000987
location: 1..25987500
location: region:1-25987500:1
RO_0002162: 263933

1
journal: Submitted (19-MAR-2022) to the INSDC. WELLCOME SANGER INSTITUTE, Tree of Life, Wellcome Genome Campus, Hinxton CB10 1SA, United Kingdom

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:25987500:1
position: 25987500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-25987500:1:source
BFO_0000050: sequence
organism: Yponomeuta sedellus
chromosome: 4
mol type: genomic DNA

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 682575..682774
location: region:682575-682774:1
BFO_0000051: feature:682575-682774:1:region
SIO_000974: 81c598ed-980c-47b1-9225-524bfc12d74f

position:682575:1
position: 682575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:682774:1
position: 682774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

81c598ed-980c-47b1-9225-524bfc12d74f
SIO_000300: 1
SIO_000628: feature:682575-682774:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 840494..840693
location: region:840494-840693:1
BFO_0000051: feature:840494-840693:1:region
SIO_000974: 71c0616c-0530-4517-b821-090da52ab9a1

position:840494:1
position: 840494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:840693:1
position: 840693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

71c0616c-0530-4517-b821-090da52ab9a1
SIO_000300: 1
SIO_000628: feature:840494-840693:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 867544..867743
location: region:867544-867743:1
BFO_0000051: feature:867544-867743:1:region
SIO_000974: e8ca95a5-ee98-4996-9f70-d6d9f8fb983d

position:867544:1
position: 867544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:867743:1
position: 867743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

e8ca95a5-ee98-4996-9f70-d6d9f8fb983d
SIO_000300: 1
SIO_000628: feature:867544-867743:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 946360..946559
location: region:946360-946559:1
BFO_0000051: feature:946360-946559:1:region
SIO_000974: 280a1b16-52f7-4359-9c61-bd3e12be701f

position:946360:1
position: 946360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:946559:1
position: 946559
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

280a1b16-52f7-4359-9c61-bd3e12be701f
SIO_000300: 1
SIO_000628: feature:946360-946559:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 1451211..1451410
location: region:1451211-1451410:1
BFO_0000051: feature:1451211-1451410:1:region
SIO_000974: 7b41379a-4140-418f-976f-27aabfa92023

position:1451211:1
position: 1451211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1451410:1
position: 1451410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

7b41379a-4140-418f-976f-27aabfa92023
SIO_000300: 1
SIO_000628: feature:1451211-1451410:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 2947923..2948122
location: region:2947923-2948122:1
BFO_0000051: feature:2947923-2948122:1:region
SIO_000974: 31f521f5-98d0-4774-97b6-08cb43df2b38

position:2947923:1
position: 2947923
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2948122:1
position: 2948122
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

31f521f5-98d0-4774-97b6-08cb43df2b38
SIO_000300: 1
SIO_000628: feature:2947923-2948122:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 3528512..3528711
location: region:3528512-3528711:1
BFO_0000051: feature:3528512-3528711:1:region
SIO_000974: 9287a2f0-79d0-441e-8d24-dc2afe12d0cb

position:3528512:1
position: 3528512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3528711:1
position: 3528711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

9287a2f0-79d0-441e-8d24-dc2afe12d0cb
SIO_000300: 1
SIO_000628: feature:3528512-3528711:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 3645312..3645511
location: region:3645312-3645511:1
BFO_0000051: feature:3645312-3645511:1:region
SIO_000974: 3dc3b871-f36c-47e2-8f71-058031c206f1

position:3645312:1
position: 3645312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3645511:1
position: 3645511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

3dc3b871-f36c-47e2-8f71-058031c206f1
SIO_000300: 1
SIO_000628: feature:3645312-3645511:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 5893369..5893568
location: region:5893369-5893568:1
BFO_0000051: feature:5893369-5893568:1:region
SIO_000974: 1d17795b-4696-42a5-9d0a-c38f4f202a66

position:5893369:1
position: 5893369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5893568:1
position: 5893568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

1d17795b-4696-42a5-9d0a-c38f4f202a66
SIO_000300: 1
SIO_000628: feature:5893369-5893568:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 13697569..13697768
location: region:13697569-13697768:1
BFO_0000051: feature:13697569-13697768:1:region
SIO_000974: 8973d578-a3ac-4e74-9644-70c97412a0ab

position:13697569:1
position: 13697569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13697768:1
position: 13697768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

8973d578-a3ac-4e74-9644-70c97412a0ab
SIO_000300: 1
SIO_000628: feature:13697569-13697768:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 15371604..15371803
location: region:15371604-15371803:1
BFO_0000051: feature:15371604-15371803:1:region
SIO_000974: 7cfeff5e-af45-4eca-83fe-10e6cbe8af64

position:15371604:1
position: 15371604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15371803:1
position: 15371803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

7cfeff5e-af45-4eca-83fe-10e6cbe8af64
SIO_000300: 1
SIO_000628: feature:15371604-15371803:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 15438350..15438549
location: region:15438350-15438549:1
BFO_0000051: feature:15438350-15438549:1:region
SIO_000974: 092a294c-7c89-49d5-8d75-9cb6a5ee5268

position:15438350:1
position: 15438350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15438549:1
position: 15438549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

092a294c-7c89-49d5-8d75-9cb6a5ee5268
SIO_000300: 1
SIO_000628: feature:15438350-15438549:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 16962767..16962966
location: region:16962767-16962966:1
BFO_0000051: feature:16962767-16962966:1:region
SIO_000974: 283be237-8060-42ab-9b15-5d74a528ce54

position:16962767:1
position: 16962767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16962966:1
position: 16962966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

283be237-8060-42ab-9b15-5d74a528ce54
SIO_000300: 1
SIO_000628: feature:16962767-16962966:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 18182297..18182496
location: region:18182297-18182496:1
BFO_0000051: feature:18182297-18182496:1:region
SIO_000974: ed94af97-b273-4f13-81e4-752184dda6b2

position:18182297:1
position: 18182297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18182496:1
position: 18182496
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ed94af97-b273-4f13-81e4-752184dda6b2
SIO_000300: 1
SIO_000628: feature:18182297-18182496:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 19320014..19320213
location: region:19320014-19320213:1
BFO_0000051: feature:19320014-19320213:1:region
SIO_000974: 083b8d46-9910-41b3-8e6d-a0499af97712

position:19320014:1
position: 19320014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19320213:1
position: 19320213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

083b8d46-9910-41b3-8e6d-a0499af97712
SIO_000300: 1
SIO_000628: feature:19320014-19320213:1:region

Yponomeuta sedellus genome assembly, chromosome: 5.
type: Entry
definition: Yponomeuta sedellus genome assembly, chromosome: 5.
sequence version: OW203726.1
sequence date: 2022-03-27
sequence: sequence
division: INV
source: Yponomeuta sedellus
organism: Yponomeuta sedellus
taxonomy: Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Lepidoptera; Glossata; Ditrysia; Yponomeutoidea; Yponomeutidae; Yponomeutinae; Yponomeuta.
reference: 1
comment: The assembly ilYpoSedl1.1 is based on 31x PacBio data and Arima2\nHi-C data\ngenerated by the Darwin Tree of Life Project\n(https://www.darwintreeoflife.org/). The assembly process included\nthe\nfollowing sequence of steps: initial PacBio assembly generation\nwith\nHifiasm, retained haplotig separation with purge_dups, and Hi-C\nbased\nscaffolding with YaHS. The mitochondrial genome was assembled using\nMitoHiFi. Finally, the assembly was analysed and manually improved\nusing\nrapid curation. Chromosome-scale scaffolds confirmed by the Hi-C\ndata have\nbeen named in order of size.

sequence
subclass of: SO_0000001
sequence length: 25328269
topology: linear
RO_0000086: SO_0000987
location: 1..25328269
location: region:1-25328269:1
RO_0002162: 263933

1
journal: Submitted (19-MAR-2022) to the INSDC. WELLCOME SANGER INSTITUTE, Tree of Life, Wellcome Genome Campus, Hinxton CB10 1SA, United Kingdom

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:25328269:1
position: 25328269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-25328269:1:source
BFO_0000050: sequence
organism: Yponomeuta sedellus
chromosome: 5
mol type: genomic DNA

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 468835..469034
location: region:468835-469034:1
BFO_0000051: feature:468835-469034:1:region
SIO_000974: 8924d452-737a-4fd5-a4f9-0d89fcaa5396

position:468835:1
position: 468835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:469034:1
position: 469034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

8924d452-737a-4fd5-a4f9-0d89fcaa5396
SIO_000300: 1
SIO_000628: feature:468835-469034:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 4492667..4492866
location: region:4492667-4492866:1
BFO_0000051: feature:4492667-4492866:1:region
SIO_000974: 917fef0e-b08a-4e77-89ab-d3d1e315e5f3

position:4492667:1
position: 4492667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4492866:1
position: 4492866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

917fef0e-b08a-4e77-89ab-d3d1e315e5f3
SIO_000300: 1
SIO_000628: feature:4492667-4492866:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 4700660..4700859
location: region:4700660-4700859:1
BFO_0000051: feature:4700660-4700859:1:region
SIO_000974: 291bd1ce-c75c-4c83-bd09-21e203a67cc1

position:4700660:1
position: 4700660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4700859:1
position: 4700859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

291bd1ce-c75c-4c83-bd09-21e203a67cc1
SIO_000300: 1
SIO_000628: feature:4700660-4700859:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 8448726..8448925
location: region:8448726-8448925:1
BFO_0000051: feature:8448726-8448925:1:region
SIO_000974: 158b615f-9689-42b5-b5cf-4b38c861fa97

position:8448726:1
position: 8448726
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8448925:1
position: 8448925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

158b615f-9689-42b5-b5cf-4b38c861fa97
SIO_000300: 1
SIO_000628: feature:8448726-8448925:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 9204327..9204526
location: region:9204327-9204526:1
BFO_0000051: feature:9204327-9204526:1:region
SIO_000974: c8849b74-234b-4eed-9342-89c2955cd857

position:9204327:1
position: 9204327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9204526:1
position: 9204526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

c8849b74-234b-4eed-9342-89c2955cd857
SIO_000300: 1
SIO_000628: feature:9204327-9204526:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 11497292..11497491
location: region:11497292-11497491:1
BFO_0000051: feature:11497292-11497491:1:region
SIO_000974: 48d392eb-68bf-4874-9d4b-6b98de55fc08

position:11497292:1
position: 11497292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11497491:1
position: 11497491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

48d392eb-68bf-4874-9d4b-6b98de55fc08
SIO_000300: 1
SIO_000628: feature:11497292-11497491:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 11813337..11813536
location: region:11813337-11813536:1
BFO_0000051: feature:11813337-11813536:1:region
SIO_000974: ad793371-a78a-491e-9f7a-a2f17586699c

position:11813337:1
position: 11813337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11813536:1
position: 11813536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

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SIO_000300: 1
SIO_000628: feature:11813337-11813536:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 15556288..15556487
location: region:15556288-15556487:1
BFO_0000051: feature:15556288-15556487:1:region
SIO_000974: 9bb7b9f7-def0-42ee-b10e-595d4ce408e3

position:15556288:1
position: 15556288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15556487:1
position: 15556487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

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SIO_000300: 1
SIO_000628: feature:15556288-15556487:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 23789993..23790192
location: region:23789993-23790192:1
BFO_0000051: feature:23789993-23790192:1:region
SIO_000974: 40ffb3ca-df3d-4660-ae69-c7dc20c1573b

position:23789993:1
position: 23789993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:23790192:1
position: 23790192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

40ffb3ca-df3d-4660-ae69-c7dc20c1573b
SIO_000300: 1
SIO_000628: feature:23789993-23790192:1:region

Yponomeuta sedellus genome assembly, chromosome: 6.
type: Entry
definition: Yponomeuta sedellus genome assembly, chromosome: 6.
sequence version: OW203727.1
sequence date: 2022-03-27
sequence: sequence
division: INV
source: Yponomeuta sedellus
organism: Yponomeuta sedellus
taxonomy: Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Lepidoptera; Glossata; Ditrysia; Yponomeutoidea; Yponomeutidae; Yponomeutinae; Yponomeuta.
reference: 1
comment: The assembly ilYpoSedl1.1 is based on 31x PacBio data and Arima2\nHi-C data\ngenerated by the Darwin Tree of Life Project\n(https://www.darwintreeoflife.org/). The assembly process included\nthe\nfollowing sequence of steps: initial PacBio assembly generation\nwith\nHifiasm, retained haplotig separation with purge_dups, and Hi-C\nbased\nscaffolding with YaHS. The mitochondrial genome was assembled using\nMitoHiFi. Finally, the assembly was analysed and manually improved\nusing\nrapid curation. Chromosome-scale scaffolds confirmed by the Hi-C\ndata have\nbeen named in order of size.

sequence
subclass of: SO_0000001
sequence length: 25200344
topology: linear
RO_0000086: SO_0000987
location: 1..25200344
location: region:1-25200344:1
RO_0002162: 263933

1
journal: Submitted (19-MAR-2022) to the INSDC. WELLCOME SANGER INSTITUTE, Tree of Life, Wellcome Genome Campus, Hinxton CB10 1SA, United Kingdom

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:25200344:1
position: 25200344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-25200344:1:source
BFO_0000050: sequence
organism: Yponomeuta sedellus
chromosome: 6
mol type: genomic DNA

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 187001..187200
location: region:187001-187200:1
BFO_0000051: feature:187001-187200:1:region
SIO_000974: 41e01e82-383e-452f-a0f6-27fa70ca4f87

position:187001:1
position: 187001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:187200:1
position: 187200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

41e01e82-383e-452f-a0f6-27fa70ca4f87
SIO_000300: 1
SIO_000628: feature:187001-187200:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 2132892..2133091
location: region:2132892-2133091:1
BFO_0000051: feature:2132892-2133091:1:region
SIO_000974: b782456c-c9ef-4a92-95c6-afe03d93c12d

position:2132892:1
position: 2132892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2133091:1
position: 2133091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

b782456c-c9ef-4a92-95c6-afe03d93c12d
SIO_000300: 1
SIO_000628: feature:2132892-2133091:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 4765700..4765899
location: region:4765700-4765899:1
BFO_0000051: feature:4765700-4765899:1:region
SIO_000974: fe1982b6-3d90-4966-ac5c-13ac78d4b41d

position:4765700:1
position: 4765700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4765899:1
position: 4765899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

fe1982b6-3d90-4966-ac5c-13ac78d4b41d
SIO_000300: 1
SIO_000628: feature:4765700-4765899:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 5168354..5168553
location: region:5168354-5168553:1
BFO_0000051: feature:5168354-5168553:1:region
SIO_000974: 7e983702-a28a-4215-b8d3-fde90c3b8234

position:5168354:1
position: 5168354
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5168553:1
position: 5168553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

7e983702-a28a-4215-b8d3-fde90c3b8234
SIO_000300: 1
SIO_000628: feature:5168354-5168553:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 5490546..5490745
location: region:5490546-5490745:1
BFO_0000051: feature:5490546-5490745:1:region
SIO_000974: 6258950a-0a18-44da-b5fc-c8a8e213e2a0

position:5490546:1
position: 5490546
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5490745:1
position: 5490745
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

6258950a-0a18-44da-b5fc-c8a8e213e2a0
SIO_000300: 1
SIO_000628: feature:5490546-5490745:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 9737975..9738174
location: region:9737975-9738174:1
BFO_0000051: feature:9737975-9738174:1:region
SIO_000974: 165a67fd-68e6-4592-ac33-2d37d7ac0dea

position:9737975:1
position: 9737975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9738174:1
position: 9738174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

165a67fd-68e6-4592-ac33-2d37d7ac0dea
SIO_000300: 1
SIO_000628: feature:9737975-9738174:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 10330801..10331000
location: region:10330801-10331000:1
BFO_0000051: feature:10330801-10331000:1:region
SIO_000974: 801cb6a7-b31f-480a-8727-4c2b1f595527

position:10330801:1
position: 10330801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10331000:1
position: 10331000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

801cb6a7-b31f-480a-8727-4c2b1f595527
SIO_000300: 1
SIO_000628: feature:10330801-10331000:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 12994049..12994248
location: region:12994049-12994248:1
BFO_0000051: feature:12994049-12994248:1:region
SIO_000974: 730cd141-5743-41fd-9fd5-9b9fe03cb0b4

position:12994049:1
position: 12994049
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12994248:1
position: 12994248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

730cd141-5743-41fd-9fd5-9b9fe03cb0b4
SIO_000300: 1
SIO_000628: feature:12994049-12994248:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 14154661..14154860
location: region:14154661-14154860:1
BFO_0000051: feature:14154661-14154860:1:region
SIO_000974: eb7e40aa-93a9-4607-8cd0-bf30d61e376c

position:14154661:1
position: 14154661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14154860:1
position: 14154860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

eb7e40aa-93a9-4607-8cd0-bf30d61e376c
SIO_000300: 1
SIO_000628: feature:14154661-14154860:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 16261125..16261324
location: region:16261125-16261324:1
BFO_0000051: feature:16261125-16261324:1:region
SIO_000974: 1b3887c5-5083-437c-ad8d-7cf43e9046a1

position:16261125:1
position: 16261125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16261324:1
position: 16261324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

1b3887c5-5083-437c-ad8d-7cf43e9046a1
SIO_000300: 1
SIO_000628: feature:16261125-16261324:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 17724837..17725036
location: region:17724837-17725036:1
BFO_0000051: feature:17724837-17725036:1:region
SIO_000974: a2ebbcbb-e1ce-439d-930e-2e2ae443d49f

position:17724837:1
position: 17724837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17725036:1
position: 17725036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

a2ebbcbb-e1ce-439d-930e-2e2ae443d49f
SIO_000300: 1
SIO_000628: feature:17724837-17725036:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 18868111..18868310
location: region:18868111-18868310:1
BFO_0000051: feature:18868111-18868310:1:region
SIO_000974: 1aff4297-e067-4440-8288-5ec0e4cda57b

position:18868111:1
position: 18868111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18868310:1
position: 18868310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

1aff4297-e067-4440-8288-5ec0e4cda57b
SIO_000300: 1
SIO_000628: feature:18868111-18868310:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 22984253..22984452
location: region:22984253-22984452:1
BFO_0000051: feature:22984253-22984452:1:region
SIO_000974: 73b3952e-8419-4f3a-a4c6-541acd4295ec

position:22984253:1
position: 22984253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22984452:1
position: 22984452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

73b3952e-8419-4f3a-a4c6-541acd4295ec
SIO_000300: 1
SIO_000628: feature:22984253-22984452:1:region

Yponomeuta sedellus genome assembly, chromosome: 7.
type: Entry
definition: Yponomeuta sedellus genome assembly, chromosome: 7.
sequence version: OW203728.1
sequence date: 2022-03-27
sequence: sequence
division: INV
source: Yponomeuta sedellus
organism: Yponomeuta sedellus
taxonomy: Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Lepidoptera; Glossata; Ditrysia; Yponomeutoidea; Yponomeutidae; Yponomeutinae; Yponomeuta.
reference: 1
comment: The assembly ilYpoSedl1.1 is based on 31x PacBio data and Arima2\nHi-C data\ngenerated by the Darwin Tree of Life Project\n(https://www.darwintreeoflife.org/). The assembly process included\nthe\nfollowing sequence of steps: initial PacBio assembly generation\nwith\nHifiasm, retained haplotig separation with purge_dups, and Hi-C\nbased\nscaffolding with YaHS. The mitochondrial genome was assembled using\nMitoHiFi. Finally, the assembly was analysed and manually improved\nusing\nrapid curation. Chromosome-scale scaffolds confirmed by the Hi-C\ndata have\nbeen named in order of size.

sequence
subclass of: SO_0000001
sequence length: 25060794
topology: linear
RO_0000086: SO_0000987
location: 1..25060794
location: region:1-25060794:1
RO_0002162: 263933

1
journal: Submitted (19-MAR-2022) to the INSDC. WELLCOME SANGER INSTITUTE, Tree of Life, Wellcome Genome Campus, Hinxton CB10 1SA, United Kingdom

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:25060794:1
position: 25060794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-25060794:1:source
BFO_0000050: sequence
organism: Yponomeuta sedellus
chromosome: 7
mol type: genomic DNA

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 9005001..9005200
location: region:9005001-9005200:1
BFO_0000051: feature:9005001-9005200:1:region
SIO_000974: 79817f90-b3dd-482f-b058-b59a993fd48f

position:9005001:1
position: 9005001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9005200:1
position: 9005200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

79817f90-b3dd-482f-b058-b59a993fd48f
SIO_000300: 1
SIO_000628: feature:9005001-9005200:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 13051638..13051837
location: region:13051638-13051837:1
BFO_0000051: feature:13051638-13051837:1:region
SIO_000974: 0784672c-9cdf-4368-869f-f1209252e796

position:13051638:1
position: 13051638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13051837:1
position: 13051837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

0784672c-9cdf-4368-869f-f1209252e796
SIO_000300: 1
SIO_000628: feature:13051638-13051837:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 13675166..13675365
location: region:13675166-13675365:1
BFO_0000051: feature:13675166-13675365:1:region
SIO_000974: 92a09d0e-f119-4ada-95fc-58591fc1a9eb

position:13675166:1
position: 13675166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13675365:1
position: 13675365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

92a09d0e-f119-4ada-95fc-58591fc1a9eb
SIO_000300: 1
SIO_000628: feature:13675166-13675365:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 15002786..15002985
location: region:15002786-15002985:1
BFO_0000051: feature:15002786-15002985:1:region
SIO_000974: aac5bf55-fe6d-49bd-abfe-d2dc0c471bfb

position:15002786:1
position: 15002786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15002985:1
position: 15002985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

aac5bf55-fe6d-49bd-abfe-d2dc0c471bfb
SIO_000300: 1
SIO_000628: feature:15002786-15002985:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 15509325..15509524
location: region:15509325-15509524:1
BFO_0000051: feature:15509325-15509524:1:region
SIO_000974: 12d324e2-f4a6-442f-b4e6-aee6104cc0cd

position:15509325:1
position: 15509325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15509524:1
position: 15509524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

12d324e2-f4a6-442f-b4e6-aee6104cc0cd
SIO_000300: 1
SIO_000628: feature:15509325-15509524:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 16082181..16082380
location: region:16082181-16082380:1
BFO_0000051: feature:16082181-16082380:1:region
SIO_000974: cb6bb843-d4f6-417c-afa3-ef3ec7d5ad4e

position:16082181:1
position: 16082181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16082380:1
position: 16082380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

cb6bb843-d4f6-417c-afa3-ef3ec7d5ad4e
SIO_000300: 1
SIO_000628: feature:16082181-16082380:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 20128071..20128270
location: region:20128071-20128270:1
BFO_0000051: feature:20128071-20128270:1:region
SIO_000974: 21c42661-2ab0-423c-a745-f345777aff68

position:20128071:1
position: 20128071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20128270:1
position: 20128270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

21c42661-2ab0-423c-a745-f345777aff68
SIO_000300: 1
SIO_000628: feature:20128071-20128270:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 20817453..20817652
location: region:20817453-20817652:1
BFO_0000051: feature:20817453-20817652:1:region
SIO_000974: 5448f070-cb32-405a-91be-c04c90910c20

position:20817453:1
position: 20817453
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20817652:1
position: 20817652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

5448f070-cb32-405a-91be-c04c90910c20
SIO_000300: 1
SIO_000628: feature:20817453-20817652:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 22542094..22542293
location: region:22542094-22542293:1
BFO_0000051: feature:22542094-22542293:1:region
SIO_000974: 8b368cb2-1c82-4ab8-932a-48dfaa7ea6ae

position:22542094:1
position: 22542094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22542293:1
position: 22542293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

8b368cb2-1c82-4ab8-932a-48dfaa7ea6ae
SIO_000300: 1
SIO_000628: feature:22542094-22542293:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 23663123..23663322
location: region:23663123-23663322:1
BFO_0000051: feature:23663123-23663322:1:region
SIO_000974: 0ba75ec4-72a5-40d1-8dfd-21c4d975fd9d

position:23663123:1
position: 23663123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:23663322:1
position: 23663322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

0ba75ec4-72a5-40d1-8dfd-21c4d975fd9d
SIO_000300: 1
SIO_000628: feature:23663123-23663322:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 23868595..23868794
location: region:23868595-23868794:1
BFO_0000051: feature:23868595-23868794:1:region
SIO_000974: 4727aa32-a886-4a6b-8d7b-d62af742a486

position:23868595:1
position: 23868595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:23868794:1
position: 23868794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

4727aa32-a886-4a6b-8d7b-d62af742a486
SIO_000300: 1
SIO_000628: feature:23868595-23868794:1:region

Yponomeuta sedellus genome assembly, chromosome: 8.
type: Entry
definition: Yponomeuta sedellus genome assembly, chromosome: 8.
sequence version: OW203729.1
sequence date: 2022-03-27
sequence: sequence
division: INV
source: Yponomeuta sedellus
organism: Yponomeuta sedellus
taxonomy: Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Lepidoptera; Glossata; Ditrysia; Yponomeutoidea; Yponomeutidae; Yponomeutinae; Yponomeuta.
reference: 1
comment: The assembly ilYpoSedl1.1 is based on 31x PacBio data and Arima2\nHi-C data\ngenerated by the Darwin Tree of Life Project\n(https://www.darwintreeoflife.org/). The assembly process included\nthe\nfollowing sequence of steps: initial PacBio assembly generation\nwith\nHifiasm, retained haplotig separation with purge_dups, and Hi-C\nbased\nscaffolding with YaHS. The mitochondrial genome was assembled using\nMitoHiFi. Finally, the assembly was analysed and manually improved\nusing\nrapid curation. Chromosome-scale scaffolds confirmed by the Hi-C\ndata have\nbeen named in order of size.

sequence
subclass of: SO_0000001
sequence length: 25056161
topology: linear
RO_0000086: SO_0000987
location: 1..25056161
location: region:1-25056161:1
RO_0002162: 263933

1
journal: Submitted (19-MAR-2022) to the INSDC. WELLCOME SANGER INSTITUTE, Tree of Life, Wellcome Genome Campus, Hinxton CB10 1SA, United Kingdom

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:25056161:1
position: 25056161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-25056161:1:source
BFO_0000050: sequence
organism: Yponomeuta sedellus
chromosome: 8
mol type: genomic DNA

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 362116..362315
location: region:362116-362315:1
BFO_0000051: feature:362116-362315:1:region
SIO_000974: 9f4740e8-a3fa-4efb-bca6-9e05396c8b26

position:362116:1
position: 362116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:362315:1
position: 362315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

9f4740e8-a3fa-4efb-bca6-9e05396c8b26
SIO_000300: 1
SIO_000628: feature:362116-362315:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 6802004..6802203
location: region:6802004-6802203:1
BFO_0000051: feature:6802004-6802203:1:region
SIO_000974: cfa4d0ed-c5ad-4fa0-af68-8cdf1d78473a

position:6802004:1
position: 6802004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6802203:1
position: 6802203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

cfa4d0ed-c5ad-4fa0-af68-8cdf1d78473a
SIO_000300: 1
SIO_000628: feature:6802004-6802203:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 11479911..11480110
location: region:11479911-11480110:1
BFO_0000051: feature:11479911-11480110:1:region
SIO_000974: 0202c683-eef4-4531-874e-2cd37de17e42

position:11479911:1
position: 11479911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11480110:1
position: 11480110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

0202c683-eef4-4531-874e-2cd37de17e42
SIO_000300: 1
SIO_000628: feature:11479911-11480110:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 11963966..11964165
location: region:11963966-11964165:1
BFO_0000051: feature:11963966-11964165:1:region
SIO_000974: a5b3a766-975a-4f8d-9df3-66a735aae5b3

position:11963966:1
position: 11963966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11964165:1
position: 11964165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

a5b3a766-975a-4f8d-9df3-66a735aae5b3
SIO_000300: 1
SIO_000628: feature:11963966-11964165:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 12092100..12092299
location: region:12092100-12092299:1
BFO_0000051: feature:12092100-12092299:1:region
SIO_000974: 7ff04b21-a28c-4ec7-8395-b8796e301402

position:12092100:1
position: 12092100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12092299:1
position: 12092299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

7ff04b21-a28c-4ec7-8395-b8796e301402
SIO_000300: 1
SIO_000628: feature:12092100-12092299:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 12494106..12494305
location: region:12494106-12494305:1
BFO_0000051: feature:12494106-12494305:1:region
SIO_000974: ec3bba08-3698-490a-a3d4-ac815cc842f4

position:12494106:1
position: 12494106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12494305:1
position: 12494305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ec3bba08-3698-490a-a3d4-ac815cc842f4
SIO_000300: 1
SIO_000628: feature:12494106-12494305:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 12736102..12736301
location: region:12736102-12736301:1
BFO_0000051: feature:12736102-12736301:1:region
SIO_000974: a9d0790b-5370-4fe9-b131-48b13bcfed0d

position:12736102:1
position: 12736102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12736301:1
position: 12736301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

a9d0790b-5370-4fe9-b131-48b13bcfed0d
SIO_000300: 1
SIO_000628: feature:12736102-12736301:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 14987505..14987704
location: region:14987505-14987704:1
BFO_0000051: feature:14987505-14987704:1:region
SIO_000974: 53fca185-cfcf-4581-9381-4e287ae1a4af

position:14987505:1
position: 14987505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14987704:1
position: 14987704
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

53fca185-cfcf-4581-9381-4e287ae1a4af
SIO_000300: 1
SIO_000628: feature:14987505-14987704:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 18049927..18050126
location: region:18049927-18050126:1
BFO_0000051: feature:18049927-18050126:1:region
SIO_000974: da0aa3b6-2f20-4e9d-8765-813d3e64744e

position:18049927:1
position: 18049927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18050126:1
position: 18050126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

da0aa3b6-2f20-4e9d-8765-813d3e64744e
SIO_000300: 1
SIO_000628: feature:18049927-18050126:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 18203018..18203217
location: region:18203018-18203217:1
BFO_0000051: feature:18203018-18203217:1:region
SIO_000974: f492c195-6be0-49e8-b915-b1ab1a605447

position:18203018:1
position: 18203018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18203217:1
position: 18203217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

f492c195-6be0-49e8-b915-b1ab1a605447
SIO_000300: 1
SIO_000628: feature:18203018-18203217:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 21205652..21205851
location: region:21205652-21205851:1
BFO_0000051: feature:21205652-21205851:1:region
SIO_000974: 580210ff-637a-4287-940e-20c3aeb59dc3

position:21205652:1
position: 21205652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21205851:1
position: 21205851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

580210ff-637a-4287-940e-20c3aeb59dc3
SIO_000300: 1
SIO_000628: feature:21205652-21205851:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 24513407..24513606
location: region:24513407-24513606:1
BFO_0000051: feature:24513407-24513606:1:region
SIO_000974: 6fc6f51b-6dff-4151-9e66-da0fa73eb2ca

position:24513407:1
position: 24513407
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:24513606:1
position: 24513606
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

6fc6f51b-6dff-4151-9e66-da0fa73eb2ca
SIO_000300: 1
SIO_000628: feature:24513407-24513606:1:region

Yponomeuta sedellus genome assembly, chromosome: 9.
type: Entry
definition: Yponomeuta sedellus genome assembly, chromosome: 9.
sequence version: OW203730.1
sequence date: 2022-03-27
sequence: sequence
division: INV
source: Yponomeuta sedellus
organism: Yponomeuta sedellus
taxonomy: Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Lepidoptera; Glossata; Ditrysia; Yponomeutoidea; Yponomeutidae; Yponomeutinae; Yponomeuta.
reference: 1
comment: The assembly ilYpoSedl1.1 is based on 31x PacBio data and Arima2\nHi-C data\ngenerated by the Darwin Tree of Life Project\n(https://www.darwintreeoflife.org/). The assembly process included\nthe\nfollowing sequence of steps: initial PacBio assembly generation\nwith\nHifiasm, retained haplotig separation with purge_dups, and Hi-C\nbased\nscaffolding with YaHS. The mitochondrial genome was assembled using\nMitoHiFi. Finally, the assembly was analysed and manually improved\nusing\nrapid curation. Chromosome-scale scaffolds confirmed by the Hi-C\ndata have\nbeen named in order of size.

sequence
subclass of: SO_0000001
sequence length: 24695869
topology: linear
RO_0000086: SO_0000987
location: 1..24695869
location: region:1-24695869:1
RO_0002162: 263933

1
journal: Submitted (19-MAR-2022) to the INSDC. WELLCOME SANGER INSTITUTE, Tree of Life, Wellcome Genome Campus, Hinxton CB10 1SA, United Kingdom

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:24695869:1
position: 24695869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-24695869:1:source
BFO_0000050: sequence
organism: Yponomeuta sedellus
chromosome: 9
mol type: genomic DNA

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 180896..181095
location: region:180896-181095:1
BFO_0000051: feature:180896-181095:1:region
SIO_000974: b5f82915-ba34-4e9d-b6b2-494dcdeb5b32

position:180896:1
position: 180896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:181095:1
position: 181095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

b5f82915-ba34-4e9d-b6b2-494dcdeb5b32
SIO_000300: 1
SIO_000628: feature:180896-181095:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 911795..911994
location: region:911795-911994:1
BFO_0000051: feature:911795-911994:1:region
SIO_000974: 34ff6754-58b5-44d8-9c04-1e3ef9a5e11b

position:911795:1
position: 911795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:911994:1
position: 911994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

34ff6754-58b5-44d8-9c04-1e3ef9a5e11b
SIO_000300: 1
SIO_000628: feature:911795-911994:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 2323203..2323402
location: region:2323203-2323402:1
BFO_0000051: feature:2323203-2323402:1:region
SIO_000974: beee672f-30e5-4d78-bbf2-de391046a018

position:2323203:1
position: 2323203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2323402:1
position: 2323402
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

beee672f-30e5-4d78-bbf2-de391046a018
SIO_000300: 1
SIO_000628: feature:2323203-2323402:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 2478781..2478980
location: region:2478781-2478980:1
BFO_0000051: feature:2478781-2478980:1:region
SIO_000974: 0e462217-f40e-4a53-a66b-b934a9e15ecf

position:2478781:1
position: 2478781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2478980:1
position: 2478980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

0e462217-f40e-4a53-a66b-b934a9e15ecf
SIO_000300: 1
SIO_000628: feature:2478781-2478980:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 3390186..3390385
location: region:3390186-3390385:1
BFO_0000051: feature:3390186-3390385:1:region
SIO_000974: c1672357-4a0e-4eda-b045-ddbcc227d981

position:3390186:1
position: 3390186
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3390385:1
position: 3390385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

c1672357-4a0e-4eda-b045-ddbcc227d981
SIO_000300: 1
SIO_000628: feature:3390186-3390385:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 3635585..3635784
location: region:3635585-3635784:1
BFO_0000051: feature:3635585-3635784:1:region
SIO_000974: e811f03a-aace-45bb-82e7-7d26c5858453

position:3635585:1
position: 3635585
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3635784:1
position: 3635784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

e811f03a-aace-45bb-82e7-7d26c5858453
SIO_000300: 1
SIO_000628: feature:3635585-3635784:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 8051492..8051691
location: region:8051492-8051691:1
BFO_0000051: feature:8051492-8051691:1:region
SIO_000974: aa05303f-bf5d-413f-a656-a877a0374042

position:8051492:1
position: 8051492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8051691:1
position: 8051691
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

aa05303f-bf5d-413f-a656-a877a0374042
SIO_000300: 1
SIO_000628: feature:8051492-8051691:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 10257705..10257904
location: region:10257705-10257904:1
BFO_0000051: feature:10257705-10257904:1:region
SIO_000974: 019eba32-4f4a-4c50-9779-133699f2b8ff

position:10257705:1
position: 10257705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10257904:1
position: 10257904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

019eba32-4f4a-4c50-9779-133699f2b8ff
SIO_000300: 1
SIO_000628: feature:10257705-10257904:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 10581805..10582004
location: region:10581805-10582004:1
BFO_0000051: feature:10581805-10582004:1:region
SIO_000974: 4ec94922-3501-49cc-9f3b-f6c8b267be3e

position:10581805:1
position: 10581805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10582004:1
position: 10582004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

4ec94922-3501-49cc-9f3b-f6c8b267be3e
SIO_000300: 1
SIO_000628: feature:10581805-10582004:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 13438046..13438245
location: region:13438046-13438245:1
BFO_0000051: feature:13438046-13438245:1:region
SIO_000974: 7e64ee9c-35a5-41ef-86ec-355b160d087d

position:13438046:1
position: 13438046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13438245:1
position: 13438245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

7e64ee9c-35a5-41ef-86ec-355b160d087d
SIO_000300: 1
SIO_000628: feature:13438046-13438245:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 17687461..17687660
location: region:17687461-17687660:1
BFO_0000051: feature:17687461-17687660:1:region
SIO_000974: 791de777-57ba-489d-acf8-2b4d211f2788

position:17687461:1
position: 17687461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17687660:1
position: 17687660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

791de777-57ba-489d-acf8-2b4d211f2788
SIO_000300: 1
SIO_000628: feature:17687461-17687660:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 17798518..17798717
location: region:17798518-17798717:1
BFO_0000051: feature:17798518-17798717:1:region
SIO_000974: 27cf1e20-2df0-4334-8729-618a481b1827

position:17798518:1
position: 17798518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17798717:1
position: 17798717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

27cf1e20-2df0-4334-8729-618a481b1827
SIO_000300: 1
SIO_000628: feature:17798518-17798717:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 18274955..18275154
location: region:18274955-18275154:1
BFO_0000051: feature:18274955-18275154:1:region
SIO_000974: 80f9e488-1ae5-459a-8123-5391123b9a47

position:18274955:1
position: 18274955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18275154:1
position: 18275154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

80f9e488-1ae5-459a-8123-5391123b9a47
SIO_000300: 1
SIO_000628: feature:18274955-18275154:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 18333246..18333445
location: region:18333246-18333445:1
BFO_0000051: feature:18333246-18333445:1:region
SIO_000974: ad1af012-c887-4456-8b5f-6c5b3c52c02d

position:18333246:1
position: 18333246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18333445:1
position: 18333445
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ad1af012-c887-4456-8b5f-6c5b3c52c02d
SIO_000300: 1
SIO_000628: feature:18333246-18333445:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 20211015..20211214
location: region:20211015-20211214:1
BFO_0000051: feature:20211015-20211214:1:region
SIO_000974: c9b2da95-54d0-4902-a068-4e1028f56596

position:20211015:1
position: 20211015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20211214:1
position: 20211214
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

c9b2da95-54d0-4902-a068-4e1028f56596
SIO_000300: 1
SIO_000628: feature:20211015-20211214:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 22537224..22537423
location: region:22537224-22537423:1
BFO_0000051: feature:22537224-22537423:1:region
SIO_000974: 5ed8f828-7802-4400-a0ec-592a58261cc4

position:22537224:1
position: 22537224
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22537423:1
position: 22537423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

5ed8f828-7802-4400-a0ec-592a58261cc4
SIO_000300: 1
SIO_000628: feature:22537224-22537423:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 24206009..24206208
location: region:24206009-24206208:1
BFO_0000051: feature:24206009-24206208:1:region
SIO_000974: 33d6ce3c-f4f6-4d51-92b0-ed36c6453832

position:24206009:1
position: 24206009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:24206208:1
position: 24206208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

33d6ce3c-f4f6-4d51-92b0-ed36c6453832
SIO_000300: 1
SIO_000628: feature:24206009-24206208:1:region

Yponomeuta sedellus genome assembly, chromosome: 10.
type: Entry
definition: Yponomeuta sedellus genome assembly, chromosome: 10.
sequence version: OW203731.1
sequence date: 2022-03-27
sequence: sequence
division: INV
source: Yponomeuta sedellus
organism: Yponomeuta sedellus
taxonomy: Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Lepidoptera; Glossata; Ditrysia; Yponomeutoidea; Yponomeutidae; Yponomeutinae; Yponomeuta.
reference: 1
comment: The assembly ilYpoSedl1.1 is based on 31x PacBio data and Arima2\nHi-C data\ngenerated by the Darwin Tree of Life Project\n(https://www.darwintreeoflife.org/). The assembly process included\nthe\nfollowing sequence of steps: initial PacBio assembly generation\nwith\nHifiasm, retained haplotig separation with purge_dups, and Hi-C\nbased\nscaffolding with YaHS. The mitochondrial genome was assembled using\nMitoHiFi. Finally, the assembly was analysed and manually improved\nusing\nrapid curation. Chromosome-scale scaffolds confirmed by the Hi-C\ndata have\nbeen named in order of size.

sequence
subclass of: SO_0000001
sequence length: 24201810
topology: linear
RO_0000086: SO_0000987
location: 1..24201810
location: region:1-24201810:1
RO_0002162: 263933

1
journal: Submitted (19-MAR-2022) to the INSDC. WELLCOME SANGER INSTITUTE, Tree of Life, Wellcome Genome Campus, Hinxton CB10 1SA, United Kingdom

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:24201810:1
position: 24201810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-24201810:1:source
BFO_0000050: sequence
organism: Yponomeuta sedellus
chromosome: 10
mol type: genomic DNA

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 1413001..1413200
location: region:1413001-1413200:1
BFO_0000051: feature:1413001-1413200:1:region
SIO_000974: 9db12144-e096-4a1b-8841-1eeca656d10d

position:1413001:1
position: 1413001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1413200:1
position: 1413200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

9db12144-e096-4a1b-8841-1eeca656d10d
SIO_000300: 1
SIO_000628: feature:1413001-1413200:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 2279414..2279613
location: region:2279414-2279613:1
BFO_0000051: feature:2279414-2279613:1:region
SIO_000974: 477f0cd3-1ddc-4f7e-a594-d28507876d7e

position:2279414:1
position: 2279414
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2279613:1
position: 2279613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

477f0cd3-1ddc-4f7e-a594-d28507876d7e
SIO_000300: 1
SIO_000628: feature:2279414-2279613:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 3527792..3527991
location: region:3527792-3527991:1
BFO_0000051: feature:3527792-3527991:1:region
SIO_000974: d1f31379-f559-4125-af4d-09f581f2d463

position:3527792:1
position: 3527792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3527991:1
position: 3527991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

d1f31379-f559-4125-af4d-09f581f2d463
SIO_000300: 1
SIO_000628: feature:3527792-3527991:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 8103775..8103974
location: region:8103775-8103974:1
BFO_0000051: feature:8103775-8103974:1:region
SIO_000974: f16e7a64-3096-44b8-a708-32e0c2f2583e

position:8103775:1
position: 8103775
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8103974:1
position: 8103974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

f16e7a64-3096-44b8-a708-32e0c2f2583e
SIO_000300: 1
SIO_000628: feature:8103775-8103974:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 9121998..9122197
location: region:9121998-9122197:1
BFO_0000051: feature:9121998-9122197:1:region
SIO_000974: f1755d78-8ea9-4227-8b11-3421938ae5e8

position:9121998:1
position: 9121998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9122197:1
position: 9122197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

f1755d78-8ea9-4227-8b11-3421938ae5e8
SIO_000300: 1
SIO_000628: feature:9121998-9122197:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 11984093..11984292
location: region:11984093-11984292:1
BFO_0000051: feature:11984093-11984292:1:region
SIO_000974: 145cccc5-81d3-4485-bc07-2c0192b89c4c

position:11984093:1
position: 11984093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11984292:1
position: 11984292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

145cccc5-81d3-4485-bc07-2c0192b89c4c
SIO_000300: 1
SIO_000628: feature:11984093-11984292:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 12588904..12589103
location: region:12588904-12589103:1
BFO_0000051: feature:12588904-12589103:1:region
SIO_000974: 4fa18e41-f7c1-4d21-9363-75c0636c9878

position:12588904:1
position: 12588904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12589103:1
position: 12589103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

4fa18e41-f7c1-4d21-9363-75c0636c9878
SIO_000300: 1
SIO_000628: feature:12588904-12589103:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 13046862..13047061
location: region:13046862-13047061:1
BFO_0000051: feature:13046862-13047061:1:region
SIO_000974: 0c450329-b761-4f52-974b-d7d37855cfdf

position:13046862:1
position: 13046862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13047061:1
position: 13047061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

0c450329-b761-4f52-974b-d7d37855cfdf
SIO_000300: 1
SIO_000628: feature:13046862-13047061:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 15002370..15002569
location: region:15002370-15002569:1
BFO_0000051: feature:15002370-15002569:1:region
SIO_000974: 80fdc640-4217-4867-8af9-4a3591605e18

position:15002370:1
position: 15002370
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15002569:1
position: 15002569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

80fdc640-4217-4867-8af9-4a3591605e18
SIO_000300: 1
SIO_000628: feature:15002370-15002569:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 17461709..17461908
location: region:17461709-17461908:1
BFO_0000051: feature:17461709-17461908:1:region
SIO_000974: c21a59af-ba09-4707-b7e4-20e0351b89e7

position:17461709:1
position: 17461709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17461908:1
position: 17461908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

c21a59af-ba09-4707-b7e4-20e0351b89e7
SIO_000300: 1
SIO_000628: feature:17461709-17461908:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 19323092..19323291
location: region:19323092-19323291:1
BFO_0000051: feature:19323092-19323291:1:region
SIO_000974: 0b09d40d-2433-440f-a882-58b9083b5723

position:19323092:1
position: 19323092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19323291:1
position: 19323291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

0b09d40d-2433-440f-a882-58b9083b5723
SIO_000300: 1
SIO_000628: feature:19323092-19323291:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 19483722..19483921
location: region:19483722-19483921:1
BFO_0000051: feature:19483722-19483921:1:region
SIO_000974: 5601aa85-abc5-4762-9279-7292ac9c97a6

position:19483722:1
position: 19483722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19483921:1
position: 19483921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

5601aa85-abc5-4762-9279-7292ac9c97a6
SIO_000300: 1
SIO_000628: feature:19483722-19483921:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 20660001..20660200
location: region:20660001-20660200:1
BFO_0000051: feature:20660001-20660200:1:region
SIO_000974: 9435bd04-0c44-4116-a86c-35f5c1b80ec5

position:20660001:1
position: 20660001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20660200:1
position: 20660200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

9435bd04-0c44-4116-a86c-35f5c1b80ec5
SIO_000300: 1
SIO_000628: feature:20660001-20660200:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 22669884..22670083
location: region:22669884-22670083:1
BFO_0000051: feature:22669884-22670083:1:region
SIO_000974: 65a55783-f24b-49fe-b22c-6ab7620dc1c1

position:22669884:1
position: 22669884
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22670083:1
position: 22670083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

65a55783-f24b-49fe-b22c-6ab7620dc1c1
SIO_000300: 1
SIO_000628: feature:22669884-22670083:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 23699350..23699549
location: region:23699350-23699549:1
BFO_0000051: feature:23699350-23699549:1:region
SIO_000974: f00f7109-dc28-4833-a212-ef05f47ec816

position:23699350:1
position: 23699350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:23699549:1
position: 23699549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

f00f7109-dc28-4833-a212-ef05f47ec816
SIO_000300: 1
SIO_000628: feature:23699350-23699549:1:region

Yponomeuta sedellus genome assembly, chromosome: 11.
type: Entry
definition: Yponomeuta sedellus genome assembly, chromosome: 11.
sequence version: OW203732.1
sequence date: 2022-03-27
sequence: sequence
division: INV
source: Yponomeuta sedellus
organism: Yponomeuta sedellus
taxonomy: Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Lepidoptera; Glossata; Ditrysia; Yponomeutoidea; Yponomeutidae; Yponomeutinae; Yponomeuta.
reference: 1
comment: The assembly ilYpoSedl1.1 is based on 31x PacBio data and Arima2\nHi-C data\ngenerated by the Darwin Tree of Life Project\n(https://www.darwintreeoflife.org/). The assembly process included\nthe\nfollowing sequence of steps: initial PacBio assembly generation\nwith\nHifiasm, retained haplotig separation with purge_dups, and Hi-C\nbased\nscaffolding with YaHS. The mitochondrial genome was assembled using\nMitoHiFi. Finally, the assembly was analysed and manually improved\nusing\nrapid curation. Chromosome-scale scaffolds confirmed by the Hi-C\ndata have\nbeen named in order of size.

sequence
subclass of: SO_0000001
sequence length: 24050226
topology: linear
RO_0000086: SO_0000987
location: 1..24050226
location: region:1-24050226:1
RO_0002162: 263933

1
journal: Submitted (19-MAR-2022) to the INSDC. WELLCOME SANGER INSTITUTE, Tree of Life, Wellcome Genome Campus, Hinxton CB10 1SA, United Kingdom

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:24050226:1
position: 24050226
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-24050226:1:source
BFO_0000050: sequence
organism: Yponomeuta sedellus
chromosome: 11
mol type: genomic DNA

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 9461001..9461200
location: region:9461001-9461200:1
BFO_0000051: feature:9461001-9461200:1:region
SIO_000974: 8bd71ad0-0995-4eff-9730-026666a74813

position:9461001:1
position: 9461001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9461200:1
position: 9461200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

8bd71ad0-0995-4eff-9730-026666a74813
SIO_000300: 1
SIO_000628: feature:9461001-9461200:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 12666133..12666332
location: region:12666133-12666332:1
BFO_0000051: feature:12666133-12666332:1:region
SIO_000974: 9d8d4551-7d4e-403e-9905-6d17f60901e0

position:12666133:1
position: 12666133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12666332:1
position: 12666332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

9d8d4551-7d4e-403e-9905-6d17f60901e0
SIO_000300: 1
SIO_000628: feature:12666133-12666332:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 14513689..14513888
location: region:14513689-14513888:1
BFO_0000051: feature:14513689-14513888:1:region
SIO_000974: bad7860b-ab7c-4ac7-9bb6-6c736923aa8f

position:14513689:1
position: 14513689
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14513888:1
position: 14513888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

bad7860b-ab7c-4ac7-9bb6-6c736923aa8f
SIO_000300: 1
SIO_000628: feature:14513689-14513888:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 20140579..20140778
location: region:20140579-20140778:1
BFO_0000051: feature:20140579-20140778:1:region
SIO_000974: 8619abfd-f490-46d5-905d-5207a63eee95

position:20140579:1
position: 20140579
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20140778:1
position: 20140778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

8619abfd-f490-46d5-905d-5207a63eee95
SIO_000300: 1
SIO_000628: feature:20140579-20140778:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 22217706..22217905
location: region:22217706-22217905:1
BFO_0000051: feature:22217706-22217905:1:region
SIO_000974: 30f020a8-3625-4c81-9539-e1bca8b76e26

position:22217706:1
position: 22217706
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22217905:1
position: 22217905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

30f020a8-3625-4c81-9539-e1bca8b76e26
SIO_000300: 1
SIO_000628: feature:22217706-22217905:1:region

Yponomeuta sedellus genome assembly, chromosome: 12.
type: Entry
definition: Yponomeuta sedellus genome assembly, chromosome: 12.
sequence version: OW203733.1
sequence date: 2022-03-27
sequence: sequence
division: INV
source: Yponomeuta sedellus
organism: Yponomeuta sedellus
taxonomy: Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Lepidoptera; Glossata; Ditrysia; Yponomeutoidea; Yponomeutidae; Yponomeutinae; Yponomeuta.
reference: 1
comment: The assembly ilYpoSedl1.1 is based on 31x PacBio data and Arima2\nHi-C data\ngenerated by the Darwin Tree of Life Project\n(https://www.darwintreeoflife.org/). The assembly process included\nthe\nfollowing sequence of steps: initial PacBio assembly generation\nwith\nHifiasm, retained haplotig separation with purge_dups, and Hi-C\nbased\nscaffolding with YaHS. The mitochondrial genome was assembled using\nMitoHiFi. Finally, the assembly was analysed and manually improved\nusing\nrapid curation. Chromosome-scale scaffolds confirmed by the Hi-C\ndata have\nbeen named in order of size.

sequence
subclass of: SO_0000001
sequence length: 23909508
topology: linear
RO_0000086: SO_0000987
location: 1..23909508
location: region:1-23909508:1
RO_0002162: 263933

1
journal: Submitted (19-MAR-2022) to the INSDC. WELLCOME SANGER INSTITUTE, Tree of Life, Wellcome Genome Campus, Hinxton CB10 1SA, United Kingdom

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:23909508:1
position: 23909508
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-23909508:1:source
BFO_0000050: sequence
organism: Yponomeuta sedellus
chromosome: 12
mol type: genomic DNA

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 993746..993945
location: region:993746-993945:1
BFO_0000051: feature:993746-993945:1:region
SIO_000974: e9c1ea2f-288a-4ad4-a256-2fbb1ba75c7c

position:993746:1
position: 993746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:993945:1
position: 993945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

e9c1ea2f-288a-4ad4-a256-2fbb1ba75c7c
SIO_000300: 1
SIO_000628: feature:993746-993945:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 2562307..2562506
location: region:2562307-2562506:1
BFO_0000051: feature:2562307-2562506:1:region
SIO_000974: debeb0aa-d0c6-4f74-9f4e-4b7b462c7d31

position:2562307:1
position: 2562307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2562506:1
position: 2562506
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

debeb0aa-d0c6-4f74-9f4e-4b7b462c7d31
SIO_000300: 1
SIO_000628: feature:2562307-2562506:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 2798828..2799027
location: region:2798828-2799027:1
BFO_0000051: feature:2798828-2799027:1:region
SIO_000974: e9d48482-b862-400a-b2e4-0808a47ddcd8

position:2798828:1
position: 2798828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2799027:1
position: 2799027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

e9d48482-b862-400a-b2e4-0808a47ddcd8
SIO_000300: 1
SIO_000628: feature:2798828-2799027:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 4260889..4261088
location: region:4260889-4261088:1
BFO_0000051: feature:4260889-4261088:1:region
SIO_000974: 01adc733-e1be-4c5f-be78-e130459752f1

position:4260889:1
position: 4260889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4261088:1
position: 4261088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

01adc733-e1be-4c5f-be78-e130459752f1
SIO_000300: 1
SIO_000628: feature:4260889-4261088:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 5678565..5678764
location: region:5678565-5678764:1
BFO_0000051: feature:5678565-5678764:1:region
SIO_000974: 5df64838-6ffa-4aae-88be-2c6d42acafef

position:5678565:1
position: 5678565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5678764:1
position: 5678764
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

5df64838-6ffa-4aae-88be-2c6d42acafef
SIO_000300: 1
SIO_000628: feature:5678565-5678764:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 5900082..5900281
location: region:5900082-5900281:1
BFO_0000051: feature:5900082-5900281:1:region
SIO_000974: ba7c858c-a0c4-47b5-95d3-e32630d128a2

position:5900082:1
position: 5900082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5900281:1
position: 5900281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ba7c858c-a0c4-47b5-95d3-e32630d128a2
SIO_000300: 1
SIO_000628: feature:5900082-5900281:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 6189682..6189881
location: region:6189682-6189881:1
BFO_0000051: feature:6189682-6189881:1:region
SIO_000974: c752a88f-ee61-476a-bd2e-12d1f2969873

position:6189682:1
position: 6189682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6189881:1
position: 6189881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

c752a88f-ee61-476a-bd2e-12d1f2969873
SIO_000300: 1
SIO_000628: feature:6189682-6189881:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 9610940..9611139
location: region:9610940-9611139:1
BFO_0000051: feature:9610940-9611139:1:region
SIO_000974: ba2a5f63-e896-448b-872b-d3a04ce7eeec

position:9610940:1
position: 9610940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9611139:1
position: 9611139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ba2a5f63-e896-448b-872b-d3a04ce7eeec
SIO_000300: 1
SIO_000628: feature:9610940-9611139:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 11870514..11870713
location: region:11870514-11870713:1
BFO_0000051: feature:11870514-11870713:1:region
SIO_000974: 4c03f82b-aadc-4529-9eb6-0c4bbdd7859e

position:11870514:1
position: 11870514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11870713:1
position: 11870713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

4c03f82b-aadc-4529-9eb6-0c4bbdd7859e
SIO_000300: 1
SIO_000628: feature:11870514-11870713:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 12114418..12114617
location: region:12114418-12114617:1
BFO_0000051: feature:12114418-12114617:1:region
SIO_000974: 8eac9e6d-7323-4f66-bbe0-4e1e3b9ec065

position:12114418:1
position: 12114418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12114617:1
position: 12114617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

8eac9e6d-7323-4f66-bbe0-4e1e3b9ec065
SIO_000300: 1
SIO_000628: feature:12114418-12114617:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 12408730..12408929
location: region:12408730-12408929:1
BFO_0000051: feature:12408730-12408929:1:region
SIO_000974: 4460800b-dd9b-4119-ac4d-b8308b2043d8

position:12408730:1
position: 12408730
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12408929:1
position: 12408929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

4460800b-dd9b-4119-ac4d-b8308b2043d8
SIO_000300: 1
SIO_000628: feature:12408730-12408929:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 15439126..15439325
location: region:15439126-15439325:1
BFO_0000051: feature:15439126-15439325:1:region
SIO_000974: b306d5a8-1f99-4fc6-a87b-28e68b80c1a5

position:15439126:1
position: 15439126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15439325:1
position: 15439325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

b306d5a8-1f99-4fc6-a87b-28e68b80c1a5
SIO_000300: 1
SIO_000628: feature:15439126-15439325:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 16819036..16819235
location: region:16819036-16819235:1
BFO_0000051: feature:16819036-16819235:1:region
SIO_000974: c8875b15-4697-4352-9a66-5f2b9c4a1cf9

position:16819036:1
position: 16819036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16819235:1
position: 16819235
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

c8875b15-4697-4352-9a66-5f2b9c4a1cf9
SIO_000300: 1
SIO_000628: feature:16819036-16819235:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 17655516..17655715
location: region:17655516-17655715:1
BFO_0000051: feature:17655516-17655715:1:region
SIO_000974: fa11c8aa-f992-4287-8b2a-d7300dcaf617

position:17655516:1
position: 17655516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17655715:1
position: 17655715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

fa11c8aa-f992-4287-8b2a-d7300dcaf617
SIO_000300: 1
SIO_000628: feature:17655516-17655715:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 21134512..21134711
location: region:21134512-21134711:1
BFO_0000051: feature:21134512-21134711:1:region
SIO_000974: 2ebd8e79-5907-48a5-9ce4-e8e431df48a6

position:21134512:1
position: 21134512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21134711:1
position: 21134711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

2ebd8e79-5907-48a5-9ce4-e8e431df48a6
SIO_000300: 1
SIO_000628: feature:21134512-21134711:1:region

Yponomeuta sedellus genome assembly, chromosome: 13.
type: Entry
definition: Yponomeuta sedellus genome assembly, chromosome: 13.
sequence version: OW203734.1
sequence date: 2022-03-27
sequence: sequence
division: INV
source: Yponomeuta sedellus
organism: Yponomeuta sedellus
taxonomy: Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Lepidoptera; Glossata; Ditrysia; Yponomeutoidea; Yponomeutidae; Yponomeutinae; Yponomeuta.
reference: 1
comment: The assembly ilYpoSedl1.1 is based on 31x PacBio data and Arima2\nHi-C data\ngenerated by the Darwin Tree of Life Project\n(https://www.darwintreeoflife.org/). The assembly process included\nthe\nfollowing sequence of steps: initial PacBio assembly generation\nwith\nHifiasm, retained haplotig separation with purge_dups, and Hi-C\nbased\nscaffolding with YaHS. The mitochondrial genome was assembled using\nMitoHiFi. Finally, the assembly was analysed and manually improved\nusing\nrapid curation. Chromosome-scale scaffolds confirmed by the Hi-C\ndata have\nbeen named in order of size.

sequence
subclass of: SO_0000001
sequence length: 23775239
topology: linear
RO_0000086: SO_0000987
location: 1..23775239
location: region:1-23775239:1
RO_0002162: 263933

1
journal: Submitted (19-MAR-2022) to the INSDC. WELLCOME SANGER INSTITUTE, Tree of Life, Wellcome Genome Campus, Hinxton CB10 1SA, United Kingdom

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:23775239:1
position: 23775239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-23775239:1:source
BFO_0000050: sequence
organism: Yponomeuta sedellus
chromosome: 13
mol type: genomic DNA

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 341277..341476
location: region:341277-341476:1
BFO_0000051: feature:341277-341476:1:region
SIO_000974: 1b743400-7fae-4fe8-af35-87069b99663a

position:341277:1
position: 341277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:341476:1
position: 341476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

1b743400-7fae-4fe8-af35-87069b99663a
SIO_000300: 1
SIO_000628: feature:341277-341476:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 1584477..1584676
location: region:1584477-1584676:1
BFO_0000051: feature:1584477-1584676:1:region
SIO_000974: cfad1683-6b21-4548-8078-b08d811f847a

position:1584477:1
position: 1584477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1584676:1
position: 1584676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

cfad1683-6b21-4548-8078-b08d811f847a
SIO_000300: 1
SIO_000628: feature:1584477-1584676:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 3014069..3014268
location: region:3014069-3014268:1
BFO_0000051: feature:3014069-3014268:1:region
SIO_000974: 401d76b3-7549-40cb-abd9-f36ea31537d2

position:3014069:1
position: 3014069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3014268:1
position: 3014268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

401d76b3-7549-40cb-abd9-f36ea31537d2
SIO_000300: 1
SIO_000628: feature:3014069-3014268:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 4620982..4621181
location: region:4620982-4621181:1
BFO_0000051: feature:4620982-4621181:1:region
SIO_000974: 9deeeac7-1de2-4886-9109-06ccf467f698

position:4620982:1
position: 4620982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4621181:1
position: 4621181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

9deeeac7-1de2-4886-9109-06ccf467f698
SIO_000300: 1
SIO_000628: feature:4620982-4621181:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 4685365..4685564
location: region:4685365-4685564:1
BFO_0000051: feature:4685365-4685564:1:region
SIO_000974: d582d565-02e3-4a5e-baae-8f29685a02d7

position:4685365:1
position: 4685365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4685564:1
position: 4685564
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

d582d565-02e3-4a5e-baae-8f29685a02d7
SIO_000300: 1
SIO_000628: feature:4685365-4685564:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 5220074..5220273
location: region:5220074-5220273:1
BFO_0000051: feature:5220074-5220273:1:region
SIO_000974: 1fddd590-5456-4c45-9260-f7d559f63877

position:5220074:1
position: 5220074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5220273:1
position: 5220273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

1fddd590-5456-4c45-9260-f7d559f63877
SIO_000300: 1
SIO_000628: feature:5220074-5220273:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 5549812..5550011
location: region:5549812-5550011:1
BFO_0000051: feature:5549812-5550011:1:region
SIO_000974: f4bea8ba-9157-47bd-ba78-1a6b1456cd58

position:5549812:1
position: 5549812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5550011:1
position: 5550011
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

f4bea8ba-9157-47bd-ba78-1a6b1456cd58
SIO_000300: 1
SIO_000628: feature:5549812-5550011:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 5584771..5584970
location: region:5584771-5584970:1
BFO_0000051: feature:5584771-5584970:1:region
SIO_000974: 0883fb31-2e02-4d6c-b7df-b967ef9a6560

position:5584771:1
position: 5584771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5584970:1
position: 5584970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

0883fb31-2e02-4d6c-b7df-b967ef9a6560
SIO_000300: 1
SIO_000628: feature:5584771-5584970:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 6144316..6144515
location: region:6144316-6144515:1
BFO_0000051: feature:6144316-6144515:1:region
SIO_000974: 237dfe57-ad92-40fe-a27a-73904a18c63e

position:6144316:1
position: 6144316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6144515:1
position: 6144515
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

237dfe57-ad92-40fe-a27a-73904a18c63e
SIO_000300: 1
SIO_000628: feature:6144316-6144515:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 13537087..13537286
location: region:13537087-13537286:1
BFO_0000051: feature:13537087-13537286:1:region
SIO_000974: bb96c47f-ba10-467d-9f7d-02c1fc5ebb8b

position:13537087:1
position: 13537087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13537286:1
position: 13537286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

bb96c47f-ba10-467d-9f7d-02c1fc5ebb8b
SIO_000300: 1
SIO_000628: feature:13537087-13537286:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 13858371..13858570
location: region:13858371-13858570:1
BFO_0000051: feature:13858371-13858570:1:region
SIO_000974: 056c2009-dff5-4835-94e8-ac0516266dee

position:13858371:1
position: 13858371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13858570:1
position: 13858570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

056c2009-dff5-4835-94e8-ac0516266dee
SIO_000300: 1
SIO_000628: feature:13858371-13858570:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 15590480..15590679
location: region:15590480-15590679:1
BFO_0000051: feature:15590480-15590679:1:region
SIO_000974: 61b38546-cb7c-479d-8da3-ad164f3ef8f4

position:15590480:1
position: 15590480
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15590679:1
position: 15590679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

61b38546-cb7c-479d-8da3-ad164f3ef8f4
SIO_000300: 1
SIO_000628: feature:15590480-15590679:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 16002743..16002942
location: region:16002743-16002942:1
BFO_0000051: feature:16002743-16002942:1:region
SIO_000974: 24dd7907-9a2b-455d-bc05-696114c755eb

position:16002743:1
position: 16002743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16002942:1
position: 16002942
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

24dd7907-9a2b-455d-bc05-696114c755eb
SIO_000300: 1
SIO_000628: feature:16002743-16002942:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 17896982..17897181
location: region:17896982-17897181:1
BFO_0000051: feature:17896982-17897181:1:region
SIO_000974: 4c266481-a1c7-43ec-acec-8d95fad7b9b4

position:17896982:1
position: 17896982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17897181:1
position: 17897181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

4c266481-a1c7-43ec-acec-8d95fad7b9b4
SIO_000300: 1
SIO_000628: feature:17896982-17897181:1:region

Yponomeuta sedellus genome assembly, chromosome: 14.
type: Entry
definition: Yponomeuta sedellus genome assembly, chromosome: 14.
sequence version: OW203735.1
sequence date: 2022-03-27
sequence: sequence
division: INV
source: Yponomeuta sedellus
organism: Yponomeuta sedellus
taxonomy: Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Lepidoptera; Glossata; Ditrysia; Yponomeutoidea; Yponomeutidae; Yponomeutinae; Yponomeuta.
reference: 1
comment: The assembly ilYpoSedl1.1 is based on 31x PacBio data and Arima2\nHi-C data\ngenerated by the Darwin Tree of Life Project\n(https://www.darwintreeoflife.org/). The assembly process included\nthe\nfollowing sequence of steps: initial PacBio assembly generation\nwith\nHifiasm, retained haplotig separation with purge_dups, and Hi-C\nbased\nscaffolding with YaHS. The mitochondrial genome was assembled using\nMitoHiFi. Finally, the assembly was analysed and manually improved\nusing\nrapid curation. Chromosome-scale scaffolds confirmed by the Hi-C\ndata have\nbeen named in order of size.

sequence
subclass of: SO_0000001
sequence length: 23686939
topology: linear
RO_0000086: SO_0000987
location: 1..23686939
location: region:1-23686939:1
RO_0002162: 263933

1
journal: Submitted (19-MAR-2022) to the INSDC. WELLCOME SANGER INSTITUTE, Tree of Life, Wellcome Genome Campus, Hinxton CB10 1SA, United Kingdom

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:23686939:1
position: 23686939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-23686939:1:source
BFO_0000050: sequence
organism: Yponomeuta sedellus
chromosome: 14
mol type: genomic DNA

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 1567632..1567831
location: region:1567632-1567831:1
BFO_0000051: feature:1567632-1567831:1:region
SIO_000974: f77a505c-b7e6-4edb-9c3a-7f3c8bf22121

position:1567632:1
position: 1567632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1567831:1
position: 1567831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

f77a505c-b7e6-4edb-9c3a-7f3c8bf22121
SIO_000300: 1
SIO_000628: feature:1567632-1567831:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 4710694..4710893
location: region:4710694-4710893:1
BFO_0000051: feature:4710694-4710893:1:region
SIO_000974: 5b770c41-31d3-4195-8eb4-9514fc989aab

position:4710694:1
position: 4710694
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4710893:1
position: 4710893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

5b770c41-31d3-4195-8eb4-9514fc989aab
SIO_000300: 1
SIO_000628: feature:4710694-4710893:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 8661928..8662127
location: region:8661928-8662127:1
BFO_0000051: feature:8661928-8662127:1:region
SIO_000974: bab2fb71-f2bb-4256-a269-0b4a7f7ff5a3

position:8661928:1
position: 8661928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8662127:1
position: 8662127
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

bab2fb71-f2bb-4256-a269-0b4a7f7ff5a3
SIO_000300: 1
SIO_000628: feature:8661928-8662127:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 13033760..13033959
location: region:13033760-13033959:1
BFO_0000051: feature:13033760-13033959:1:region
SIO_000974: 5a6d66a5-aab8-4498-8d56-8e3eb249f86d

position:13033760:1
position: 13033760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13033959:1
position: 13033959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

5a6d66a5-aab8-4498-8d56-8e3eb249f86d
SIO_000300: 1
SIO_000628: feature:13033760-13033959:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 14413762..14413961
location: region:14413762-14413961:1
BFO_0000051: feature:14413762-14413961:1:region
SIO_000974: 5370d7a3-10c6-4205-99be-9d1e6239eafd

position:14413762:1
position: 14413762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14413961:1
position: 14413961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

5370d7a3-10c6-4205-99be-9d1e6239eafd
SIO_000300: 1
SIO_000628: feature:14413762-14413961:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 16647452..16647651
location: region:16647452-16647651:1
BFO_0000051: feature:16647452-16647651:1:region
SIO_000974: 822554ae-036d-496b-bc6c-ba380ac2dfdb

position:16647452:1
position: 16647452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16647651:1
position: 16647651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

822554ae-036d-496b-bc6c-ba380ac2dfdb
SIO_000300: 1
SIO_000628: feature:16647452-16647651:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 17501234..17501433
location: region:17501234-17501433:1
BFO_0000051: feature:17501234-17501433:1:region
SIO_000974: 4e8cec3d-73d5-4a88-bb3b-22f4f0b5e648

position:17501234:1
position: 17501234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17501433:1
position: 17501433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

4e8cec3d-73d5-4a88-bb3b-22f4f0b5e648
SIO_000300: 1
SIO_000628: feature:17501234-17501433:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 18984659..18984858
location: region:18984659-18984858:1
BFO_0000051: feature:18984659-18984858:1:region
SIO_000974: c9c55c58-c326-45ef-94fd-d29f08ccdb43

position:18984659:1
position: 18984659
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18984858:1
position: 18984858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

c9c55c58-c326-45ef-94fd-d29f08ccdb43
SIO_000300: 1
SIO_000628: feature:18984659-18984858:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 19391866..19392065
location: region:19391866-19392065:1
BFO_0000051: feature:19391866-19392065:1:region
SIO_000974: a1236bfb-5497-4a23-bf8b-670437ff7933

position:19391866:1
position: 19391866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19392065:1
position: 19392065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

a1236bfb-5497-4a23-bf8b-670437ff7933
SIO_000300: 1
SIO_000628: feature:19391866-19392065:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 20567267..20567466
location: region:20567267-20567466:1
BFO_0000051: feature:20567267-20567466:1:region
SIO_000974: 5a6c88f9-3fcc-4a90-83c5-ca4a8291005f

position:20567267:1
position: 20567267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20567466:1
position: 20567466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

5a6c88f9-3fcc-4a90-83c5-ca4a8291005f
SIO_000300: 1
SIO_000628: feature:20567267-20567466:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 20899177..20899376
location: region:20899177-20899376:1
BFO_0000051: feature:20899177-20899376:1:region
SIO_000974: 940c44d4-8968-4928-b4ac-f10b15135b52

position:20899177:1
position: 20899177
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20899376:1
position: 20899376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

940c44d4-8968-4928-b4ac-f10b15135b52
SIO_000300: 1
SIO_000628: feature:20899177-20899376:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 22392927..22393126
location: region:22392927-22393126:1
BFO_0000051: feature:22392927-22393126:1:region
SIO_000974: 33a24ee5-f14d-4476-b946-fffc919517cb

position:22392927:1
position: 22392927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22393126:1
position: 22393126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

33a24ee5-f14d-4476-b946-fffc919517cb
SIO_000300: 1
SIO_000628: feature:22392927-22393126:1:region

Yponomeuta sedellus genome assembly, chromosome: 15.
type: Entry
definition: Yponomeuta sedellus genome assembly, chromosome: 15.
sequence version: OW203736.1
sequence date: 2022-03-27
sequence: sequence
division: INV
source: Yponomeuta sedellus
organism: Yponomeuta sedellus
taxonomy: Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Lepidoptera; Glossata; Ditrysia; Yponomeutoidea; Yponomeutidae; Yponomeutinae; Yponomeuta.
reference: 1
comment: The assembly ilYpoSedl1.1 is based on 31x PacBio data and Arima2\nHi-C data\ngenerated by the Darwin Tree of Life Project\n(https://www.darwintreeoflife.org/). The assembly process included\nthe\nfollowing sequence of steps: initial PacBio assembly generation\nwith\nHifiasm, retained haplotig separation with purge_dups, and Hi-C\nbased\nscaffolding with YaHS. The mitochondrial genome was assembled using\nMitoHiFi. Finally, the assembly was analysed and manually improved\nusing\nrapid curation. Chromosome-scale scaffolds confirmed by the Hi-C\ndata have\nbeen named in order of size.

sequence
subclass of: SO_0000001
sequence length: 23131100
topology: linear
RO_0000086: SO_0000987
location: 1..23131100
location: region:1-23131100:1
RO_0002162: 263933

1
journal: Submitted (19-MAR-2022) to the INSDC. WELLCOME SANGER INSTITUTE, Tree of Life, Wellcome Genome Campus, Hinxton CB10 1SA, United Kingdom

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:23131100:1
position: 23131100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-23131100:1:source
BFO_0000050: sequence
organism: Yponomeuta sedellus
chromosome: 15
mol type: genomic DNA

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 738391..738590
location: region:738391-738590:1
BFO_0000051: feature:738391-738590:1:region
SIO_000974: c8160c06-58f7-408e-8d82-5de83776d733

position:738391:1
position: 738391
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:738590:1
position: 738590
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

c8160c06-58f7-408e-8d82-5de83776d733
SIO_000300: 1
SIO_000628: feature:738391-738590:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 6329909..6330108
location: region:6329909-6330108:1
BFO_0000051: feature:6329909-6330108:1:region
SIO_000974: b5e56b67-918b-4a20-890a-7765196fd57b

position:6329909:1
position: 6329909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6330108:1
position: 6330108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

b5e56b67-918b-4a20-890a-7765196fd57b
SIO_000300: 1
SIO_000628: feature:6329909-6330108:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 8119875..8120074
location: region:8119875-8120074:1
BFO_0000051: feature:8119875-8120074:1:region
SIO_000974: 7511bcc6-1018-46fe-98e0-d300e5dcea96

position:8119875:1
position: 8119875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8120074:1
position: 8120074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

7511bcc6-1018-46fe-98e0-d300e5dcea96
SIO_000300: 1
SIO_000628: feature:8119875-8120074:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 12161069..12161268
location: region:12161069-12161268:1
BFO_0000051: feature:12161069-12161268:1:region
SIO_000974: 76a49cab-d359-48b9-ade5-3a68f7d14846

position:12161069:1
position: 12161069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12161268:1
position: 12161268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

76a49cab-d359-48b9-ade5-3a68f7d14846
SIO_000300: 1
SIO_000628: feature:12161069-12161268:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 13902187..13902386
location: region:13902187-13902386:1
BFO_0000051: feature:13902187-13902386:1:region
SIO_000974: d7c9d0f1-0494-4638-a333-d156fc19c05a

position:13902187:1
position: 13902187
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13902386:1
position: 13902386
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

d7c9d0f1-0494-4638-a333-d156fc19c05a
SIO_000300: 1
SIO_000628: feature:13902187-13902386:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 14196361..14196560
location: region:14196361-14196560:1
BFO_0000051: feature:14196361-14196560:1:region
SIO_000974: 8338d3cc-781f-4ce5-80cd-2fc9f4a6df83

position:14196361:1
position: 14196361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14196560:1
position: 14196560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

8338d3cc-781f-4ce5-80cd-2fc9f4a6df83
SIO_000300: 1
SIO_000628: feature:14196361-14196560:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 14552721..14552920
location: region:14552721-14552920:1
BFO_0000051: feature:14552721-14552920:1:region
SIO_000974: 118edc48-a4b4-4122-9aee-582448ac0266

position:14552721:1
position: 14552721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14552920:1
position: 14552920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

118edc48-a4b4-4122-9aee-582448ac0266
SIO_000300: 1
SIO_000628: feature:14552721-14552920:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 15334327..15334526
location: region:15334327-15334526:1
BFO_0000051: feature:15334327-15334526:1:region
SIO_000974: 9c60c474-45c4-4376-8b71-7eef2810580d

position:15334327:1
position: 15334327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15334526:1
position: 15334526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

9c60c474-45c4-4376-8b71-7eef2810580d
SIO_000300: 1
SIO_000628: feature:15334327-15334526:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 16940308..16940507
location: region:16940308-16940507:1
BFO_0000051: feature:16940308-16940507:1:region
SIO_000974: 4d4c7a1f-9dbb-41d4-a746-2783320a7dbc

position:16940308:1
position: 16940308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16940507:1
position: 16940507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

4d4c7a1f-9dbb-41d4-a746-2783320a7dbc
SIO_000300: 1
SIO_000628: feature:16940308-16940507:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 17063105..17063304
location: region:17063105-17063304:1
BFO_0000051: feature:17063105-17063304:1:region
SIO_000974: 95a0a022-96d1-47a4-a4c5-cc815bd5b6b1

position:17063105:1
position: 17063105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17063304:1
position: 17063304
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

95a0a022-96d1-47a4-a4c5-cc815bd5b6b1
SIO_000300: 1
SIO_000628: feature:17063105-17063304:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 21005397..21005596
location: region:21005397-21005596:1
BFO_0000051: feature:21005397-21005596:1:region
SIO_000974: d0fd94ef-1028-475a-9eed-e23b318497b0

position:21005397:1
position: 21005397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21005596:1
position: 21005596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

d0fd94ef-1028-475a-9eed-e23b318497b0
SIO_000300: 1
SIO_000628: feature:21005397-21005596:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 21263522..21263721
location: region:21263522-21263721:1
BFO_0000051: feature:21263522-21263721:1:region
SIO_000974: 8a514054-8f70-4ef0-8100-86e51177ca0c

position:21263522:1
position: 21263522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21263721:1
position: 21263721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

8a514054-8f70-4ef0-8100-86e51177ca0c
SIO_000300: 1
SIO_000628: feature:21263522-21263721:1:region

Yponomeuta sedellus genome assembly, chromosome: 16.
type: Entry
definition: Yponomeuta sedellus genome assembly, chromosome: 16.
sequence version: OW203737.1
sequence date: 2022-03-27
sequence: sequence
division: INV
source: Yponomeuta sedellus
organism: Yponomeuta sedellus
taxonomy: Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Lepidoptera; Glossata; Ditrysia; Yponomeutoidea; Yponomeutidae; Yponomeutinae; Yponomeuta.
reference: 1
comment: The assembly ilYpoSedl1.1 is based on 31x PacBio data and Arima2\nHi-C data\ngenerated by the Darwin Tree of Life Project\n(https://www.darwintreeoflife.org/). The assembly process included\nthe\nfollowing sequence of steps: initial PacBio assembly generation\nwith\nHifiasm, retained haplotig separation with purge_dups, and Hi-C\nbased\nscaffolding with YaHS. The mitochondrial genome was assembled using\nMitoHiFi. Finally, the assembly was analysed and manually improved\nusing\nrapid curation. Chromosome-scale scaffolds confirmed by the Hi-C\ndata have\nbeen named in order of size.

sequence
subclass of: SO_0000001
sequence length: 22354548
topology: linear
RO_0000086: SO_0000987
location: 1..22354548
location: region:1-22354548:1
RO_0002162: 263933

1
journal: Submitted (19-MAR-2022) to the INSDC. WELLCOME SANGER INSTITUTE, Tree of Life, Wellcome Genome Campus, Hinxton CB10 1SA, United Kingdom

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22354548:1
position: 22354548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-22354548:1:source
BFO_0000050: sequence
organism: Yponomeuta sedellus
chromosome: 16
mol type: genomic DNA

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 2421765..2421964
location: region:2421765-2421964:1
BFO_0000051: feature:2421765-2421964:1:region
SIO_000974: 50d0a408-8f5b-401d-af2e-17744a3a4699

position:2421765:1
position: 2421765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2421964:1
position: 2421964
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

50d0a408-8f5b-401d-af2e-17744a3a4699
SIO_000300: 1
SIO_000628: feature:2421765-2421964:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 3273942..3274141
location: region:3273942-3274141:1
BFO_0000051: feature:3273942-3274141:1:region
SIO_000974: 799263cc-b620-484e-a904-28fe3fe2872b

position:3273942:1
position: 3273942
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3274141:1
position: 3274141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

799263cc-b620-484e-a904-28fe3fe2872b
SIO_000300: 1
SIO_000628: feature:3273942-3274141:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 4386186..4386385
location: region:4386186-4386385:1
BFO_0000051: feature:4386186-4386385:1:region
SIO_000974: 18d625c1-3003-4583-9288-c02cae08db74

position:4386186:1
position: 4386186
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4386385:1
position: 4386385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

18d625c1-3003-4583-9288-c02cae08db74
SIO_000300: 1
SIO_000628: feature:4386186-4386385:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 4525194..4525393
location: region:4525194-4525393:1
BFO_0000051: feature:4525194-4525393:1:region
SIO_000974: 127fc48f-b045-488d-8a9e-71548b337d71

position:4525194:1
position: 4525194
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4525393:1
position: 4525393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

127fc48f-b045-488d-8a9e-71548b337d71
SIO_000300: 1
SIO_000628: feature:4525194-4525393:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 4695481..4695680
location: region:4695481-4695680:1
BFO_0000051: feature:4695481-4695680:1:region
SIO_000974: 89465a68-6ec6-4895-b3e3-9370b8b0544a

position:4695481:1
position: 4695481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4695680:1
position: 4695680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

89465a68-6ec6-4895-b3e3-9370b8b0544a
SIO_000300: 1
SIO_000628: feature:4695481-4695680:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 5592525..5592724
location: region:5592525-5592724:1
BFO_0000051: feature:5592525-5592724:1:region
SIO_000974: ced682d7-2b31-48f2-bcb4-240ea300403a

position:5592525:1
position: 5592525
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5592724:1
position: 5592724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ced682d7-2b31-48f2-bcb4-240ea300403a
SIO_000300: 1
SIO_000628: feature:5592525-5592724:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 7766998..7767197
location: region:7766998-7767197:1
BFO_0000051: feature:7766998-7767197:1:region
SIO_000974: 81b635f6-3f56-41d5-ad4b-46defde98742

position:7766998:1
position: 7766998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7767197:1
position: 7767197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

81b635f6-3f56-41d5-ad4b-46defde98742
SIO_000300: 1
SIO_000628: feature:7766998-7767197:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 10713713..10713912
location: region:10713713-10713912:1
BFO_0000051: feature:10713713-10713912:1:region
SIO_000974: 45c11a1e-1447-4f1d-bcf6-12e12c914dc9

position:10713713:1
position: 10713713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10713912:1
position: 10713912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

45c11a1e-1447-4f1d-bcf6-12e12c914dc9
SIO_000300: 1
SIO_000628: feature:10713713-10713912:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 11145558..11145757
location: region:11145558-11145757:1
BFO_0000051: feature:11145558-11145757:1:region
SIO_000974: c64f7971-19ba-4ad1-b531-765abbc6d74e

position:11145558:1
position: 11145558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11145757:1
position: 11145757
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

c64f7971-19ba-4ad1-b531-765abbc6d74e
SIO_000300: 1
SIO_000628: feature:11145558-11145757:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 12875279..12875478
location: region:12875279-12875478:1
BFO_0000051: feature:12875279-12875478:1:region
SIO_000974: a16c51ee-0991-4a6d-9f8a-2157da82bf94

position:12875279:1
position: 12875279
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12875478:1
position: 12875478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

a16c51ee-0991-4a6d-9f8a-2157da82bf94
SIO_000300: 1
SIO_000628: feature:12875279-12875478:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 17123770..17123969
location: region:17123770-17123969:1
BFO_0000051: feature:17123770-17123969:1:region
SIO_000974: d5ffe52a-5154-47cb-8e0d-a6f9f5d38026

position:17123770:1
position: 17123770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17123969:1
position: 17123969
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

d5ffe52a-5154-47cb-8e0d-a6f9f5d38026
SIO_000300: 1
SIO_000628: feature:17123770-17123969:1:region

Yponomeuta sedellus genome assembly, chromosome: 17.
type: Entry
definition: Yponomeuta sedellus genome assembly, chromosome: 17.
sequence version: OW203738.1
sequence date: 2022-03-27
sequence: sequence
division: INV
source: Yponomeuta sedellus
organism: Yponomeuta sedellus
taxonomy: Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Lepidoptera; Glossata; Ditrysia; Yponomeutoidea; Yponomeutidae; Yponomeutinae; Yponomeuta.
reference: 1
comment: The assembly ilYpoSedl1.1 is based on 31x PacBio data and Arima2\nHi-C data\ngenerated by the Darwin Tree of Life Project\n(https://www.darwintreeoflife.org/). The assembly process included\nthe\nfollowing sequence of steps: initial PacBio assembly generation\nwith\nHifiasm, retained haplotig separation with purge_dups, and Hi-C\nbased\nscaffolding with YaHS. The mitochondrial genome was assembled using\nMitoHiFi. Finally, the assembly was analysed and manually improved\nusing\nrapid curation. Chromosome-scale scaffolds confirmed by the Hi-C\ndata have\nbeen named in order of size.

sequence
subclass of: SO_0000001
sequence length: 22173098
topology: linear
RO_0000086: SO_0000987
location: 1..22173098
location: region:1-22173098:1
RO_0002162: 263933

1
journal: Submitted (19-MAR-2022) to the INSDC. WELLCOME SANGER INSTITUTE, Tree of Life, Wellcome Genome Campus, Hinxton CB10 1SA, United Kingdom

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22173098:1
position: 22173098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-22173098:1:source
BFO_0000050: sequence
organism: Yponomeuta sedellus
chromosome: 17
mol type: genomic DNA

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 899950..900149
location: region:899950-900149:1
BFO_0000051: feature:899950-900149:1:region
SIO_000974: 22870dff-9a99-4586-8e2b-54e70b2b3576

position:899950:1
position: 899950
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:900149:1
position: 900149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

22870dff-9a99-4586-8e2b-54e70b2b3576
SIO_000300: 1
SIO_000628: feature:899950-900149:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 2545242..2545441
location: region:2545242-2545441:1
BFO_0000051: feature:2545242-2545441:1:region
SIO_000974: 3a3ddf6c-9cb4-436b-8ad0-c43dc82c2574

position:2545242:1
position: 2545242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2545441:1
position: 2545441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

3a3ddf6c-9cb4-436b-8ad0-c43dc82c2574
SIO_000300: 1
SIO_000628: feature:2545242-2545441:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 4008787..4008986
location: region:4008787-4008986:1
BFO_0000051: feature:4008787-4008986:1:region
SIO_000974: 8a74787d-76c8-474a-8f2e-bf055fb643eb

position:4008787:1
position: 4008787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4008986:1
position: 4008986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

8a74787d-76c8-474a-8f2e-bf055fb643eb
SIO_000300: 1
SIO_000628: feature:4008787-4008986:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 7218668..7218867
location: region:7218668-7218867:1
BFO_0000051: feature:7218668-7218867:1:region
SIO_000974: 1f6223d1-b05c-4b98-88fe-ad6746161606

position:7218668:1
position: 7218668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7218867:1
position: 7218867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

1f6223d1-b05c-4b98-88fe-ad6746161606
SIO_000300: 1
SIO_000628: feature:7218668-7218867:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 8254977..8255176
location: region:8254977-8255176:1
BFO_0000051: feature:8254977-8255176:1:region
SIO_000974: 2cede6b6-b151-440e-be4f-05379c4bdc16

position:8254977:1
position: 8254977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8255176:1
position: 8255176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

2cede6b6-b151-440e-be4f-05379c4bdc16
SIO_000300: 1
SIO_000628: feature:8254977-8255176:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 13456877..13457076
location: region:13456877-13457076:1
BFO_0000051: feature:13456877-13457076:1:region
SIO_000974: af01d5ae-3753-4dfb-9e87-95a7f7682133

position:13456877:1
position: 13456877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13457076:1
position: 13457076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

af01d5ae-3753-4dfb-9e87-95a7f7682133
SIO_000300: 1
SIO_000628: feature:13456877-13457076:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 20165077..20165276
location: region:20165077-20165276:1
BFO_0000051: feature:20165077-20165276:1:region
SIO_000974: 79dcd420-9e6f-4ed9-b177-d730c1ed8c69

position:20165077:1
position: 20165077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20165276:1
position: 20165276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

79dcd420-9e6f-4ed9-b177-d730c1ed8c69
SIO_000300: 1
SIO_000628: feature:20165077-20165276:1:region

Yponomeuta sedellus genome assembly, chromosome: 18.
type: Entry
definition: Yponomeuta sedellus genome assembly, chromosome: 18.
sequence version: OW203739.1
sequence date: 2022-03-27
sequence: sequence
division: INV
source: Yponomeuta sedellus
organism: Yponomeuta sedellus
taxonomy: Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Lepidoptera; Glossata; Ditrysia; Yponomeutoidea; Yponomeutidae; Yponomeutinae; Yponomeuta.
reference: 1
comment: The assembly ilYpoSedl1.1 is based on 31x PacBio data and Arima2\nHi-C data\ngenerated by the Darwin Tree of Life Project\n(https://www.darwintreeoflife.org/). The assembly process included\nthe\nfollowing sequence of steps: initial PacBio assembly generation\nwith\nHifiasm, retained haplotig separation with purge_dups, and Hi-C\nbased\nscaffolding with YaHS. The mitochondrial genome was assembled using\nMitoHiFi. Finally, the assembly was analysed and manually improved\nusing\nrapid curation. Chromosome-scale scaffolds confirmed by the Hi-C\ndata have\nbeen named in order of size.

sequence
subclass of: SO_0000001
sequence length: 21874741
topology: linear
RO_0000086: SO_0000987
location: 1..21874741
location: region:1-21874741:1
RO_0002162: 263933

1
journal: Submitted (19-MAR-2022) to the INSDC. WELLCOME SANGER INSTITUTE, Tree of Life, Wellcome Genome Campus, Hinxton CB10 1SA, United Kingdom

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21874741:1
position: 21874741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-21874741:1:source
BFO_0000050: sequence
organism: Yponomeuta sedellus
chromosome: 18
mol type: genomic DNA

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 1011001..1011200
location: region:1011001-1011200:1
BFO_0000051: feature:1011001-1011200:1:region
SIO_000974: db37bf27-3e06-4675-b1b0-8e0f03011fdf

position:1011001:1
position: 1011001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1011200:1
position: 1011200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

db37bf27-3e06-4675-b1b0-8e0f03011fdf
SIO_000300: 1
SIO_000628: feature:1011001-1011200:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 4094353..4094552
location: region:4094353-4094552:1
BFO_0000051: feature:4094353-4094552:1:region
SIO_000974: 9a96cbed-abd9-4d4c-b52f-2ae313ba5b18

position:4094353:1
position: 4094353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4094552:1
position: 4094552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

9a96cbed-abd9-4d4c-b52f-2ae313ba5b18
SIO_000300: 1
SIO_000628: feature:4094353-4094552:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 8492313..8492512
location: region:8492313-8492512:1
BFO_0000051: feature:8492313-8492512:1:region
SIO_000974: fc6ffcbf-fee1-4e06-b0af-014124fc063b

position:8492313:1
position: 8492313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8492512:1
position: 8492512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

fc6ffcbf-fee1-4e06-b0af-014124fc063b
SIO_000300: 1
SIO_000628: feature:8492313-8492512:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 10002310..10002509
location: region:10002310-10002509:1
BFO_0000051: feature:10002310-10002509:1:region
SIO_000974: f39694c9-e23f-4a34-8751-bc72356a9273

position:10002310:1
position: 10002310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10002509:1
position: 10002509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

f39694c9-e23f-4a34-8751-bc72356a9273
SIO_000300: 1
SIO_000628: feature:10002310-10002509:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 11817584..11817783
location: region:11817584-11817783:1
BFO_0000051: feature:11817584-11817783:1:region
SIO_000974: ad2756d6-0c53-4b30-baee-e2c0785d18c7

position:11817584:1
position: 11817584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11817783:1
position: 11817783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ad2756d6-0c53-4b30-baee-e2c0785d18c7
SIO_000300: 1
SIO_000628: feature:11817584-11817783:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 12072695..12072894
location: region:12072695-12072894:1
BFO_0000051: feature:12072695-12072894:1:region
SIO_000974: 81dfa3b6-dcd5-4e04-9b55-551cbb1f881f

position:12072695:1
position: 12072695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12072894:1
position: 12072894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

81dfa3b6-dcd5-4e04-9b55-551cbb1f881f
SIO_000300: 1
SIO_000628: feature:12072695-12072894:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 12729866..12730065
location: region:12729866-12730065:1
BFO_0000051: feature:12729866-12730065:1:region
SIO_000974: 865feeeb-abaa-4689-bea0-0cb6ecfb3dec

position:12729866:1
position: 12729866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12730065:1
position: 12730065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

865feeeb-abaa-4689-bea0-0cb6ecfb3dec
SIO_000300: 1
SIO_000628: feature:12729866-12730065:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 14322427..14322626
location: region:14322427-14322626:1
BFO_0000051: feature:14322427-14322626:1:region
SIO_000974: 7f5e24a9-dc5f-4d83-bf4b-59359bba8744

position:14322427:1
position: 14322427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14322626:1
position: 14322626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

7f5e24a9-dc5f-4d83-bf4b-59359bba8744
SIO_000300: 1
SIO_000628: feature:14322427-14322626:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 14966584..14966783
location: region:14966584-14966783:1
BFO_0000051: feature:14966584-14966783:1:region
SIO_000974: 46d7779c-ee4a-4bd0-ae14-e1463cc0e2b6

position:14966584:1
position: 14966584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14966783:1
position: 14966783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

46d7779c-ee4a-4bd0-ae14-e1463cc0e2b6
SIO_000300: 1
SIO_000628: feature:14966584-14966783:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 18939416..18939615
location: region:18939416-18939615:1
BFO_0000051: feature:18939416-18939615:1:region
SIO_000974: 107fdb10-0ca1-47a7-9970-781125febec6

position:18939416:1
position: 18939416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18939615:1
position: 18939615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

107fdb10-0ca1-47a7-9970-781125febec6
SIO_000300: 1
SIO_000628: feature:18939416-18939615:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 19758784..19758983
location: region:19758784-19758983:1
BFO_0000051: feature:19758784-19758983:1:region
SIO_000974: 77a2b5d2-4d2e-4a4b-8899-81450482d7f7

position:19758784:1
position: 19758784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19758983:1
position: 19758983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

77a2b5d2-4d2e-4a4b-8899-81450482d7f7
SIO_000300: 1
SIO_000628: feature:19758784-19758983:1:region

Yponomeuta sedellus genome assembly, chromosome: 19.
type: Entry
definition: Yponomeuta sedellus genome assembly, chromosome: 19.
sequence version: OW203740.1
sequence date: 2022-03-27
sequence: sequence
division: INV
source: Yponomeuta sedellus
organism: Yponomeuta sedellus
taxonomy: Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Lepidoptera; Glossata; Ditrysia; Yponomeutoidea; Yponomeutidae; Yponomeutinae; Yponomeuta.
reference: 1
comment: The assembly ilYpoSedl1.1 is based on 31x PacBio data and Arima2\nHi-C data\ngenerated by the Darwin Tree of Life Project\n(https://www.darwintreeoflife.org/). The assembly process included\nthe\nfollowing sequence of steps: initial PacBio assembly generation\nwith\nHifiasm, retained haplotig separation with purge_dups, and Hi-C\nbased\nscaffolding with YaHS. The mitochondrial genome was assembled using\nMitoHiFi. Finally, the assembly was analysed and manually improved\nusing\nrapid curation. Chromosome-scale scaffolds confirmed by the Hi-C\ndata have\nbeen named in order of size.

sequence
subclass of: SO_0000001
sequence length: 21299367
topology: linear
RO_0000086: SO_0000987
location: 1..21299367
location: region:1-21299367:1
RO_0002162: 263933

1
journal: Submitted (19-MAR-2022) to the INSDC. WELLCOME SANGER INSTITUTE, Tree of Life, Wellcome Genome Campus, Hinxton CB10 1SA, United Kingdom

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21299367:1
position: 21299367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-21299367:1:source
BFO_0000050: sequence
organism: Yponomeuta sedellus
chromosome: 19
mol type: genomic DNA

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 619630..619829
location: region:619630-619829:1
BFO_0000051: feature:619630-619829:1:region
SIO_000974: 960ea512-c078-4095-93d9-107b9090b8f3

position:619630:1
position: 619630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:619829:1
position: 619829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

960ea512-c078-4095-93d9-107b9090b8f3
SIO_000300: 1
SIO_000628: feature:619630-619829:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 1375063..1375262
location: region:1375063-1375262:1
BFO_0000051: feature:1375063-1375262:1:region
SIO_000974: a4a531d1-219b-4813-a07b-fa36304c18af

position:1375063:1
position: 1375063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1375262:1
position: 1375262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

a4a531d1-219b-4813-a07b-fa36304c18af
SIO_000300: 1
SIO_000628: feature:1375063-1375262:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 1559127..1559326
location: region:1559127-1559326:1
BFO_0000051: feature:1559127-1559326:1:region
SIO_000974: c020b443-fc16-45d8-974b-4196260465a4

position:1559127:1
position: 1559127
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1559326:1
position: 1559326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

c020b443-fc16-45d8-974b-4196260465a4
SIO_000300: 1
SIO_000628: feature:1559127-1559326:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 2550175..2550374
location: region:2550175-2550374:1
BFO_0000051: feature:2550175-2550374:1:region
SIO_000974: 6fa8e001-b556-4244-8cde-79fd51785655

position:2550175:1
position: 2550175
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2550374:1
position: 2550374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

6fa8e001-b556-4244-8cde-79fd51785655
SIO_000300: 1
SIO_000628: feature:2550175-2550374:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 5105378..5105577
location: region:5105378-5105577:1
BFO_0000051: feature:5105378-5105577:1:region
SIO_000974: ad5b1008-fbb1-41fb-b23d-44f1990cb44a

position:5105378:1
position: 5105378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5105577:1
position: 5105577
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ad5b1008-fbb1-41fb-b23d-44f1990cb44a
SIO_000300: 1
SIO_000628: feature:5105378-5105577:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 7581821..7582020
location: region:7581821-7582020:1
BFO_0000051: feature:7581821-7582020:1:region
SIO_000974: 1fb8a2c6-0576-4d1b-9445-dc59069f7adb

position:7581821:1
position: 7581821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7582020:1
position: 7582020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

1fb8a2c6-0576-4d1b-9445-dc59069f7adb
SIO_000300: 1
SIO_000628: feature:7581821-7582020:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 11911356..11911555
location: region:11911356-11911555:1
BFO_0000051: feature:11911356-11911555:1:region
SIO_000974: 63ff9767-cc91-4678-b804-2f8c6913d88f

position:11911356:1
position: 11911356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11911555:1
position: 11911555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

63ff9767-cc91-4678-b804-2f8c6913d88f
SIO_000300: 1
SIO_000628: feature:11911356-11911555:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 12418646..12418845
location: region:12418646-12418845:1
BFO_0000051: feature:12418646-12418845:1:region
SIO_000974: fb155095-9955-42d9-959e-5f5ca1d217be

position:12418646:1
position: 12418646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12418845:1
position: 12418845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

fb155095-9955-42d9-959e-5f5ca1d217be
SIO_000300: 1
SIO_000628: feature:12418646-12418845:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 13900157..13900356
location: region:13900157-13900356:1
BFO_0000051: feature:13900157-13900356:1:region
SIO_000974: 40d14c93-fd41-4952-8b9f-da6d70771e42

position:13900157:1
position: 13900157
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13900356:1
position: 13900356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

40d14c93-fd41-4952-8b9f-da6d70771e42
SIO_000300: 1
SIO_000628: feature:13900157-13900356:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 14216244..14216443
location: region:14216244-14216443:1
BFO_0000051: feature:14216244-14216443:1:region
SIO_000974: fa18c135-0b65-4ea2-a331-44bad3eb838f

position:14216244:1
position: 14216244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14216443:1
position: 14216443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

fa18c135-0b65-4ea2-a331-44bad3eb838f
SIO_000300: 1
SIO_000628: feature:14216244-14216443:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 16868178..16868377
location: region:16868178-16868377:1
BFO_0000051: feature:16868178-16868377:1:region
SIO_000974: e36f7ab6-fde3-4880-be2d-4a6129ca979a

position:16868178:1
position: 16868178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16868377:1
position: 16868377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

e36f7ab6-fde3-4880-be2d-4a6129ca979a
SIO_000300: 1
SIO_000628: feature:16868178-16868377:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 17687334..17687533
location: region:17687334-17687533:1
BFO_0000051: feature:17687334-17687533:1:region
SIO_000974: 8013761a-5aa2-4313-9ae4-316399124d71

position:17687334:1
position: 17687334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17687533:1
position: 17687533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

8013761a-5aa2-4313-9ae4-316399124d71
SIO_000300: 1
SIO_000628: feature:17687334-17687533:1:region

Yponomeuta sedellus genome assembly, chromosome: 20.
type: Entry
definition: Yponomeuta sedellus genome assembly, chromosome: 20.
sequence version: OW203741.1
sequence date: 2022-03-27
sequence: sequence
division: INV
source: Yponomeuta sedellus
organism: Yponomeuta sedellus
taxonomy: Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Lepidoptera; Glossata; Ditrysia; Yponomeutoidea; Yponomeutidae; Yponomeutinae; Yponomeuta.
reference: 1
comment: The assembly ilYpoSedl1.1 is based on 31x PacBio data and Arima2\nHi-C data\ngenerated by the Darwin Tree of Life Project\n(https://www.darwintreeoflife.org/). The assembly process included\nthe\nfollowing sequence of steps: initial PacBio assembly generation\nwith\nHifiasm, retained haplotig separation with purge_dups, and Hi-C\nbased\nscaffolding with YaHS. The mitochondrial genome was assembled using\nMitoHiFi. Finally, the assembly was analysed and manually improved\nusing\nrapid curation. Chromosome-scale scaffolds confirmed by the Hi-C\ndata have\nbeen named in order of size.

sequence
subclass of: SO_0000001
sequence length: 20993420
topology: linear
RO_0000086: SO_0000987
location: 1..20993420
location: region:1-20993420:1
RO_0002162: 263933

1
journal: Submitted (19-MAR-2022) to the INSDC. WELLCOME SANGER INSTITUTE, Tree of Life, Wellcome Genome Campus, Hinxton CB10 1SA, United Kingdom

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20993420:1
position: 20993420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-20993420:1:source
BFO_0000050: sequence
organism: Yponomeuta sedellus
chromosome: 20
mol type: genomic DNA

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 3379012..3379211
location: region:3379012-3379211:1
BFO_0000051: feature:3379012-3379211:1:region
SIO_000974: 161b96ce-caa7-4618-bdc2-409d90a285a2

position:3379012:1
position: 3379012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3379211:1
position: 3379211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

161b96ce-caa7-4618-bdc2-409d90a285a2
SIO_000300: 1
SIO_000628: feature:3379012-3379211:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 4269188..4269387
location: region:4269188-4269387:1
BFO_0000051: feature:4269188-4269387:1:region
SIO_000974: f2b4884d-5573-4bb6-b189-58de2f578f2a

position:4269188:1
position: 4269188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4269387:1
position: 4269387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

f2b4884d-5573-4bb6-b189-58de2f578f2a
SIO_000300: 1
SIO_000628: feature:4269188-4269387:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 6132629..6132828
location: region:6132629-6132828:1
BFO_0000051: feature:6132629-6132828:1:region
SIO_000974: 19725942-c954-4fe6-b1f9-be2566ecfdcc

position:6132629:1
position: 6132629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6132828:1
position: 6132828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

19725942-c954-4fe6-b1f9-be2566ecfdcc
SIO_000300: 1
SIO_000628: feature:6132629-6132828:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 6768294..6768493
location: region:6768294-6768493:1
BFO_0000051: feature:6768294-6768493:1:region
SIO_000974: 13334726-f1c6-45a3-b60d-7d34436812d2

position:6768294:1
position: 6768294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6768493:1
position: 6768493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

13334726-f1c6-45a3-b60d-7d34436812d2
SIO_000300: 1
SIO_000628: feature:6768294-6768493:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 9822149..9822348
location: region:9822149-9822348:1
BFO_0000051: feature:9822149-9822348:1:region
SIO_000974: f85e114c-1822-4a32-8d7d-b01fc3200122

position:9822149:1
position: 9822149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9822348:1
position: 9822348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

f85e114c-1822-4a32-8d7d-b01fc3200122
SIO_000300: 1
SIO_000628: feature:9822149-9822348:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 10612370..10612569
location: region:10612370-10612569:1
BFO_0000051: feature:10612370-10612569:1:region
SIO_000974: ce5b5819-4ca8-421d-a67f-134940656f7a

position:10612370:1
position: 10612370
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10612569:1
position: 10612569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ce5b5819-4ca8-421d-a67f-134940656f7a
SIO_000300: 1
SIO_000628: feature:10612370-10612569:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 11380919..11381118
location: region:11380919-11381118:1
BFO_0000051: feature:11380919-11381118:1:region
SIO_000974: 78c9e97f-aef5-48bc-9a23-43ee3d9d201a

position:11380919:1
position: 11380919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11381118:1
position: 11381118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

78c9e97f-aef5-48bc-9a23-43ee3d9d201a
SIO_000300: 1
SIO_000628: feature:11380919-11381118:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 15695017..15695216
location: region:15695017-15695216:1
BFO_0000051: feature:15695017-15695216:1:region
SIO_000974: b772c69b-b479-47d6-a738-80fb3ea0cda3

position:15695017:1
position: 15695017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15695216:1
position: 15695216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

b772c69b-b479-47d6-a738-80fb3ea0cda3
SIO_000300: 1
SIO_000628: feature:15695017-15695216:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 16326705..16326904
location: region:16326705-16326904:1
BFO_0000051: feature:16326705-16326904:1:region
SIO_000974: 9f93bfc3-f3c1-445c-8a1c-0d988d6e4cd6

position:16326705:1
position: 16326705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16326904:1
position: 16326904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

9f93bfc3-f3c1-445c-8a1c-0d988d6e4cd6
SIO_000300: 1
SIO_000628: feature:16326705-16326904:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 17317630..17317829
location: region:17317630-17317829:1
BFO_0000051: feature:17317630-17317829:1:region
SIO_000974: d037b774-89dc-4315-bf92-dbeb4d9503a4

position:17317630:1
position: 17317630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17317829:1
position: 17317829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

d037b774-89dc-4315-bf92-dbeb4d9503a4
SIO_000300: 1
SIO_000628: feature:17317630-17317829:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 18230055..18230254
location: region:18230055-18230254:1
BFO_0000051: feature:18230055-18230254:1:region
SIO_000974: 7622fa0a-755f-4749-abde-16dba07e3571

position:18230055:1
position: 18230055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18230254:1
position: 18230254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

7622fa0a-755f-4749-abde-16dba07e3571
SIO_000300: 1
SIO_000628: feature:18230055-18230254:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 18324753..18324952
location: region:18324753-18324952:1
BFO_0000051: feature:18324753-18324952:1:region
SIO_000974: d141136c-74b1-4e4a-9227-4066735e1614

position:18324753:1
position: 18324753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18324952:1
position: 18324952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

d141136c-74b1-4e4a-9227-4066735e1614
SIO_000300: 1
SIO_000628: feature:18324753-18324952:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 20202663..20202862
location: region:20202663-20202862:1
BFO_0000051: feature:20202663-20202862:1:region
SIO_000974: 8a5dd46e-7f4d-46ab-9011-7615b9cf5d04

position:20202663:1
position: 20202663
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20202862:1
position: 20202862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

8a5dd46e-7f4d-46ab-9011-7615b9cf5d04
SIO_000300: 1
SIO_000628: feature:20202663-20202862:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 20316221..20316420
location: region:20316221-20316420:1
BFO_0000051: feature:20316221-20316420:1:region
SIO_000974: ba95aecf-f444-40c4-a1dc-4e66bf05ac5f

position:20316221:1
position: 20316221
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20316420:1
position: 20316420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ba95aecf-f444-40c4-a1dc-4e66bf05ac5f
SIO_000300: 1
SIO_000628: feature:20316221-20316420:1:region

Yponomeuta sedellus genome assembly, chromosome: 21.
type: Entry
definition: Yponomeuta sedellus genome assembly, chromosome: 21.
sequence version: OW203742.1
sequence date: 2022-03-27
sequence: sequence
division: INV
source: Yponomeuta sedellus
organism: Yponomeuta sedellus
taxonomy: Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Lepidoptera; Glossata; Ditrysia; Yponomeutoidea; Yponomeutidae; Yponomeutinae; Yponomeuta.
reference: 1
comment: The assembly ilYpoSedl1.1 is based on 31x PacBio data and Arima2\nHi-C data\ngenerated by the Darwin Tree of Life Project\n(https://www.darwintreeoflife.org/). The assembly process included\nthe\nfollowing sequence of steps: initial PacBio assembly generation\nwith\nHifiasm, retained haplotig separation with purge_dups, and Hi-C\nbased\nscaffolding with YaHS. The mitochondrial genome was assembled using\nMitoHiFi. Finally, the assembly was analysed and manually improved\nusing\nrapid curation. Chromosome-scale scaffolds confirmed by the Hi-C\ndata have\nbeen named in order of size.

sequence
subclass of: SO_0000001
sequence length: 19356238
topology: linear
RO_0000086: SO_0000987
location: 1..19356238
location: region:1-19356238:1
RO_0002162: 263933

1
journal: Submitted (19-MAR-2022) to the INSDC. WELLCOME SANGER INSTITUTE, Tree of Life, Wellcome Genome Campus, Hinxton CB10 1SA, United Kingdom

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19356238:1
position: 19356238
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-19356238:1:source
BFO_0000050: sequence
organism: Yponomeuta sedellus
chromosome: 21
mol type: genomic DNA

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 1759001..1759200
location: region:1759001-1759200:1
BFO_0000051: feature:1759001-1759200:1:region
SIO_000974: 6f2d3578-2612-434f-93af-886f293fad3e

position:1759001:1
position: 1759001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1759200:1
position: 1759200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

6f2d3578-2612-434f-93af-886f293fad3e
SIO_000300: 1
SIO_000628: feature:1759001-1759200:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 2631477..2631676
location: region:2631477-2631676:1
BFO_0000051: feature:2631477-2631676:1:region
SIO_000974: 03b52ca0-8a42-4da9-ab0c-91f66a1b88de

position:2631477:1
position: 2631477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2631676:1
position: 2631676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

03b52ca0-8a42-4da9-ab0c-91f66a1b88de
SIO_000300: 1
SIO_000628: feature:2631477-2631676:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 4904879..4905078
location: region:4904879-4905078:1
BFO_0000051: feature:4904879-4905078:1:region
SIO_000974: 96909080-9306-4b4d-9daf-94657e7df56e

position:4904879:1
position: 4904879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4905078:1
position: 4905078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

96909080-9306-4b4d-9daf-94657e7df56e
SIO_000300: 1
SIO_000628: feature:4904879-4905078:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 7670432..7670631
location: region:7670432-7670631:1
BFO_0000051: feature:7670432-7670631:1:region
SIO_000974: fd751c52-985e-4317-a4fe-ab088a53d3c4

position:7670432:1
position: 7670432
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7670631:1
position: 7670631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

fd751c52-985e-4317-a4fe-ab088a53d3c4
SIO_000300: 1
SIO_000628: feature:7670432-7670631:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 9870293..9870492
location: region:9870293-9870492:1
BFO_0000051: feature:9870293-9870492:1:region
SIO_000974: 6fa8964c-eb82-4e87-9a43-8d6f8b6e537f

position:9870293:1
position: 9870293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9870492:1
position: 9870492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

6fa8964c-eb82-4e87-9a43-8d6f8b6e537f
SIO_000300: 1
SIO_000628: feature:9870293-9870492:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 18122490..18122689
location: region:18122490-18122689:1
BFO_0000051: feature:18122490-18122689:1:region
SIO_000974: 5d2c24a4-d575-4a10-a06c-3c2affe419f6

position:18122490:1
position: 18122490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18122689:1
position: 18122689
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

5d2c24a4-d575-4a10-a06c-3c2affe419f6
SIO_000300: 1
SIO_000628: feature:18122490-18122689:1:region

Yponomeuta sedellus genome assembly, chromosome: 22.
type: Entry
definition: Yponomeuta sedellus genome assembly, chromosome: 22.
sequence version: OW203743.1
sequence date: 2022-03-27
sequence: sequence
division: INV
source: Yponomeuta sedellus
organism: Yponomeuta sedellus
taxonomy: Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Lepidoptera; Glossata; Ditrysia; Yponomeutoidea; Yponomeutidae; Yponomeutinae; Yponomeuta.
reference: 1
comment: The assembly ilYpoSedl1.1 is based on 31x PacBio data and Arima2\nHi-C data\ngenerated by the Darwin Tree of Life Project\n(https://www.darwintreeoflife.org/). The assembly process included\nthe\nfollowing sequence of steps: initial PacBio assembly generation\nwith\nHifiasm, retained haplotig separation with purge_dups, and Hi-C\nbased\nscaffolding with YaHS. The mitochondrial genome was assembled using\nMitoHiFi. Finally, the assembly was analysed and manually improved\nusing\nrapid curation. Chromosome-scale scaffolds confirmed by the Hi-C\ndata have\nbeen named in order of size.

sequence
subclass of: SO_0000001
sequence length: 18061692
topology: linear
RO_0000086: SO_0000987
location: 1..18061692
location: region:1-18061692:1
RO_0002162: 263933

1
journal: Submitted (19-MAR-2022) to the INSDC. WELLCOME SANGER INSTITUTE, Tree of Life, Wellcome Genome Campus, Hinxton CB10 1SA, United Kingdom

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18061692:1
position: 18061692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-18061692:1:source
BFO_0000050: sequence
organism: Yponomeuta sedellus
chromosome: 22
mol type: genomic DNA

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 561858..562057
location: region:561858-562057:1
BFO_0000051: feature:561858-562057:1:region
SIO_000974: 2c4b00db-be1f-4231-a971-33a943759a87

position:561858:1
position: 561858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:562057:1
position: 562057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

2c4b00db-be1f-4231-a971-33a943759a87
SIO_000300: 1
SIO_000628: feature:561858-562057:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 827015..827214
location: region:827015-827214:1
BFO_0000051: feature:827015-827214:1:region
SIO_000974: 0f2134fb-b2c8-412b-a3dc-9ed4a6094d72

position:827015:1
position: 827015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:827214:1
position: 827214
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

0f2134fb-b2c8-412b-a3dc-9ed4a6094d72
SIO_000300: 1
SIO_000628: feature:827015-827214:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 853290..853489
location: region:853290-853489:1
BFO_0000051: feature:853290-853489:1:region
SIO_000974: 10edd188-9ecf-465a-a817-5b625e4a0c94

position:853290:1
position: 853290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:853489:1
position: 853489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

10edd188-9ecf-465a-a817-5b625e4a0c94
SIO_000300: 1
SIO_000628: feature:853290-853489:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 1250838..1251037
location: region:1250838-1251037:1
BFO_0000051: feature:1250838-1251037:1:region
SIO_000974: 49184e1f-1b44-4a31-8e7c-bd8c9a22e7ca

position:1250838:1
position: 1250838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1251037:1
position: 1251037
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

49184e1f-1b44-4a31-8e7c-bd8c9a22e7ca
SIO_000300: 1
SIO_000628: feature:1250838-1251037:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 2408459..2408658
location: region:2408459-2408658:1
BFO_0000051: feature:2408459-2408658:1:region
SIO_000974: 9f04af3a-f4b5-4cc4-974c-dee0253e9c1d

position:2408459:1
position: 2408459
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2408658:1
position: 2408658
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

9f04af3a-f4b5-4cc4-974c-dee0253e9c1d
SIO_000300: 1
SIO_000628: feature:2408459-2408658:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 2701898..2702097
location: region:2701898-2702097:1
BFO_0000051: feature:2701898-2702097:1:region
SIO_000974: 1cc9f04f-15a2-47a0-82cd-2985b112de92

position:2701898:1
position: 2701898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2702097:1
position: 2702097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

1cc9f04f-15a2-47a0-82cd-2985b112de92
SIO_000300: 1
SIO_000628: feature:2701898-2702097:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 2754423..2754622
location: region:2754423-2754622:1
BFO_0000051: feature:2754423-2754622:1:region
SIO_000974: 287ce7e6-afb1-4014-95dd-c4e9d6c43eee

position:2754423:1
position: 2754423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2754622:1
position: 2754622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

287ce7e6-afb1-4014-95dd-c4e9d6c43eee
SIO_000300: 1
SIO_000628: feature:2754423-2754622:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 3022618..3022817
location: region:3022618-3022817:1
BFO_0000051: feature:3022618-3022817:1:region
SIO_000974: b5d307b0-54eb-48fb-bec7-9e6287ff890f

position:3022618:1
position: 3022618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3022817:1
position: 3022817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

b5d307b0-54eb-48fb-bec7-9e6287ff890f
SIO_000300: 1
SIO_000628: feature:3022618-3022817:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 4041113..4041312
location: region:4041113-4041312:1
BFO_0000051: feature:4041113-4041312:1:region
SIO_000974: 3c01e153-51f9-4279-a961-98c5d872ee43

position:4041113:1
position: 4041113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4041312:1
position: 4041312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

3c01e153-51f9-4279-a961-98c5d872ee43
SIO_000300: 1
SIO_000628: feature:4041113-4041312:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 6259221..6259420
location: region:6259221-6259420:1
BFO_0000051: feature:6259221-6259420:1:region
SIO_000974: ad5bd1cc-aaaf-430a-9461-0268f387c574

position:6259221:1
position: 6259221
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6259420:1
position: 6259420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ad5bd1cc-aaaf-430a-9461-0268f387c574
SIO_000300: 1
SIO_000628: feature:6259221-6259420:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 6876959..6877158
location: region:6876959-6877158:1
BFO_0000051: feature:6876959-6877158:1:region
SIO_000974: 2efbc5f0-9e45-46cd-8271-597056a52192

position:6876959:1
position: 6876959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6877158:1
position: 6877158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

2efbc5f0-9e45-46cd-8271-597056a52192
SIO_000300: 1
SIO_000628: feature:6876959-6877158:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 13297162..13297361
location: region:13297162-13297361:1
BFO_0000051: feature:13297162-13297361:1:region
SIO_000974: 7f90c4c5-b003-4d03-ba03-1d781506fc7e

position:13297162:1
position: 13297162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13297361:1
position: 13297361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

7f90c4c5-b003-4d03-ba03-1d781506fc7e
SIO_000300: 1
SIO_000628: feature:13297162-13297361:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 13572795..13572994
location: region:13572795-13572994:1
BFO_0000051: feature:13572795-13572994:1:region
SIO_000974: 82bac03d-7ffa-488b-b528-c1e81df3220d

position:13572795:1
position: 13572795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13572994:1
position: 13572994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

82bac03d-7ffa-488b-b528-c1e81df3220d
SIO_000300: 1
SIO_000628: feature:13572795-13572994:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 14338210..14338409
location: region:14338210-14338409:1
BFO_0000051: feature:14338210-14338409:1:region
SIO_000974: bf240f87-f951-4d59-bd86-544bd7be3e3c

position:14338210:1
position: 14338210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14338409:1
position: 14338409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

bf240f87-f951-4d59-bd86-544bd7be3e3c
SIO_000300: 1
SIO_000628: feature:14338210-14338409:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 14740646..14740845
location: region:14740646-14740845:1
BFO_0000051: feature:14740646-14740845:1:region
SIO_000974: dfa800f3-5deb-419c-8124-67084c4152bf

position:14740646:1
position: 14740646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14740845:1
position: 14740845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

dfa800f3-5deb-419c-8124-67084c4152bf
SIO_000300: 1
SIO_000628: feature:14740646-14740845:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 15289103..15289302
location: region:15289103-15289302:1
BFO_0000051: feature:15289103-15289302:1:region
SIO_000974: 63852353-1d29-46ba-8f68-36d609dab107

position:15289103:1
position: 15289103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15289302:1
position: 15289302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

63852353-1d29-46ba-8f68-36d609dab107
SIO_000300: 1
SIO_000628: feature:15289103-15289302:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 15970441..15970640
location: region:15970441-15970640:1
BFO_0000051: feature:15970441-15970640:1:region
SIO_000974: cedd6efa-00c9-48e5-8318-33ce6fb6e691

position:15970441:1
position: 15970441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15970640:1
position: 15970640
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

cedd6efa-00c9-48e5-8318-33ce6fb6e691
SIO_000300: 1
SIO_000628: feature:15970441-15970640:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 16020452..16020651
location: region:16020452-16020651:1
BFO_0000051: feature:16020452-16020651:1:region
SIO_000974: 8bbdeb17-51e4-4684-b8c4-b0098031b19d

position:16020452:1
position: 16020452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16020651:1
position: 16020651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

8bbdeb17-51e4-4684-b8c4-b0098031b19d
SIO_000300: 1
SIO_000628: feature:16020452-16020651:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 17320534..17320733
location: region:17320534-17320733:1
BFO_0000051: feature:17320534-17320733:1:region
SIO_000974: c9b8f57d-dc38-44d2-ba77-38b8e21802e8

position:17320534:1
position: 17320534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17320733:1
position: 17320733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

c9b8f57d-dc38-44d2-ba77-38b8e21802e8
SIO_000300: 1
SIO_000628: feature:17320534-17320733:1:region

Yponomeuta sedellus genome assembly, chromosome: 23.
type: Entry
definition: Yponomeuta sedellus genome assembly, chromosome: 23.
sequence version: OW203744.1
sequence date: 2022-03-27
sequence: sequence
division: INV
source: Yponomeuta sedellus
organism: Yponomeuta sedellus
taxonomy: Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Lepidoptera; Glossata; Ditrysia; Yponomeutoidea; Yponomeutidae; Yponomeutinae; Yponomeuta.
reference: 1
comment: The assembly ilYpoSedl1.1 is based on 31x PacBio data and Arima2\nHi-C data\ngenerated by the Darwin Tree of Life Project\n(https://www.darwintreeoflife.org/). The assembly process included\nthe\nfollowing sequence of steps: initial PacBio assembly generation\nwith\nHifiasm, retained haplotig separation with purge_dups, and Hi-C\nbased\nscaffolding with YaHS. The mitochondrial genome was assembled using\nMitoHiFi. Finally, the assembly was analysed and manually improved\nusing\nrapid curation. Chromosome-scale scaffolds confirmed by the Hi-C\ndata have\nbeen named in order of size.

sequence
subclass of: SO_0000001
sequence length: 17305914
topology: linear
RO_0000086: SO_0000987
location: 1..17305914
location: region:1-17305914:1
RO_0002162: 263933

1
journal: Submitted (19-MAR-2022) to the INSDC. WELLCOME SANGER INSTITUTE, Tree of Life, Wellcome Genome Campus, Hinxton CB10 1SA, United Kingdom

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17305914:1
position: 17305914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-17305914:1:source
BFO_0000050: sequence
organism: Yponomeuta sedellus
chromosome: 23
mol type: genomic DNA

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 4326095..4326294
location: region:4326095-4326294:1
BFO_0000051: feature:4326095-4326294:1:region
SIO_000974: 1a6c8fab-e350-4f45-b190-9ec3d31c5a5b

position:4326095:1
position: 4326095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4326294:1
position: 4326294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

1a6c8fab-e350-4f45-b190-9ec3d31c5a5b
SIO_000300: 1
SIO_000628: feature:4326095-4326294:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 13289493..13289692
location: region:13289493-13289692:1
BFO_0000051: feature:13289493-13289692:1:region
SIO_000974: a53db023-15ce-4576-8661-068a2f58b728

position:13289493:1
position: 13289493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13289692:1
position: 13289692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

a53db023-15ce-4576-8661-068a2f58b728
SIO_000300: 1
SIO_000628: feature:13289493-13289692:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 14329933..14330132
location: region:14329933-14330132:1
BFO_0000051: feature:14329933-14330132:1:region
SIO_000974: e743efba-4ace-423d-8294-a94f9d0c7927

position:14329933:1
position: 14329933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14330132:1
position: 14330132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

e743efba-4ace-423d-8294-a94f9d0c7927
SIO_000300: 1
SIO_000628: feature:14329933-14330132:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 15097080..15097279
location: region:15097080-15097279:1
BFO_0000051: feature:15097080-15097279:1:region
SIO_000974: aeb57d67-5d4e-47d3-ba38-f7c7e8008019

position:15097080:1
position: 15097080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15097279:1
position: 15097279
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

aeb57d67-5d4e-47d3-ba38-f7c7e8008019
SIO_000300: 1
SIO_000628: feature:15097080-15097279:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 15793892..15794091
location: region:15793892-15794091:1
BFO_0000051: feature:15793892-15794091:1:region
SIO_000974: 789fdf08-0f50-4be2-bb83-1ab8f43460b9

position:15793892:1
position: 15793892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15794091:1
position: 15794091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

789fdf08-0f50-4be2-bb83-1ab8f43460b9
SIO_000300: 1
SIO_000628: feature:15793892-15794091:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 15884012..15884211
location: region:15884012-15884211:1
BFO_0000051: feature:15884012-15884211:1:region
SIO_000974: 1c3925ec-fecf-4c19-ac43-8b50d4510967

position:15884012:1
position: 15884012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15884211:1
position: 15884211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

1c3925ec-fecf-4c19-ac43-8b50d4510967
SIO_000300: 1
SIO_000628: feature:15884012-15884211:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 15968293..15968492
location: region:15968293-15968492:1
BFO_0000051: feature:15968293-15968492:1:region
SIO_000974: acdbf3c8-f83e-4e46-a6e2-5f44c99fb254

position:15968293:1
position: 15968293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15968492:1
position: 15968492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

acdbf3c8-f83e-4e46-a6e2-5f44c99fb254
SIO_000300: 1
SIO_000628: feature:15968293-15968492:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 16103131..16103330
location: region:16103131-16103330:1
BFO_0000051: feature:16103131-16103330:1:region
SIO_000974: f9038859-c081-407e-945f-142ad8283c2c

position:16103131:1
position: 16103131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16103330:1
position: 16103330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

f9038859-c081-407e-945f-142ad8283c2c
SIO_000300: 1
SIO_000628: feature:16103131-16103330:1:region

Yponomeuta sedellus genome assembly, chromosome: 24.
type: Entry
definition: Yponomeuta sedellus genome assembly, chromosome: 24.
sequence version: OW203745.1
sequence date: 2022-03-27
sequence: sequence
division: INV
source: Yponomeuta sedellus
organism: Yponomeuta sedellus
taxonomy: Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Lepidoptera; Glossata; Ditrysia; Yponomeutoidea; Yponomeutidae; Yponomeutinae; Yponomeuta.
reference: 1
comment: The assembly ilYpoSedl1.1 is based on 31x PacBio data and Arima2\nHi-C data\ngenerated by the Darwin Tree of Life Project\n(https://www.darwintreeoflife.org/). The assembly process included\nthe\nfollowing sequence of steps: initial PacBio assembly generation\nwith\nHifiasm, retained haplotig separation with purge_dups, and Hi-C\nbased\nscaffolding with YaHS. The mitochondrial genome was assembled using\nMitoHiFi. Finally, the assembly was analysed and manually improved\nusing\nrapid curation. Chromosome-scale scaffolds confirmed by the Hi-C\ndata have\nbeen named in order of size.

sequence
subclass of: SO_0000001
sequence length: 17108792
topology: linear
RO_0000086: SO_0000987
location: 1..17108792
location: region:1-17108792:1
RO_0002162: 263933

1
journal: Submitted (19-MAR-2022) to the INSDC. WELLCOME SANGER INSTITUTE, Tree of Life, Wellcome Genome Campus, Hinxton CB10 1SA, United Kingdom

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17108792:1
position: 17108792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-17108792:1:source
BFO_0000050: sequence
organism: Yponomeuta sedellus
chromosome: 24
mol type: genomic DNA

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 1802455..1802654
location: region:1802455-1802654:1
BFO_0000051: feature:1802455-1802654:1:region
SIO_000974: a551d7c6-7edb-4c56-9e5d-34d3958afd86

position:1802455:1
position: 1802455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1802654:1
position: 1802654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

a551d7c6-7edb-4c56-9e5d-34d3958afd86
SIO_000300: 1
SIO_000628: feature:1802455-1802654:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 2532044..2532243
location: region:2532044-2532243:1
BFO_0000051: feature:2532044-2532243:1:region
SIO_000974: c809caec-951d-4b1b-9a9f-5c9473ad9f94

position:2532044:1
position: 2532044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2532243:1
position: 2532243
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

c809caec-951d-4b1b-9a9f-5c9473ad9f94
SIO_000300: 1
SIO_000628: feature:2532044-2532243:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 2938881..2939080
location: region:2938881-2939080:1
BFO_0000051: feature:2938881-2939080:1:region
SIO_000974: 892bdcfb-92e0-4959-a784-4adc0f609a3d

position:2938881:1
position: 2938881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2939080:1
position: 2939080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

892bdcfb-92e0-4959-a784-4adc0f609a3d
SIO_000300: 1
SIO_000628: feature:2938881-2939080:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 3092756..3092955
location: region:3092756-3092955:1
BFO_0000051: feature:3092756-3092955:1:region
SIO_000974: e4fa74ed-2afa-4f9d-b31c-486f2f9fac5b

position:3092756:1
position: 3092756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3092955:1
position: 3092955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

e4fa74ed-2afa-4f9d-b31c-486f2f9fac5b
SIO_000300: 1
SIO_000628: feature:3092756-3092955:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 4167820..4168019
location: region:4167820-4168019:1
BFO_0000051: feature:4167820-4168019:1:region
SIO_000974: b9a7894e-5c1c-402b-b201-b60d3cf5e994

position:4167820:1
position: 4167820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4168019:1
position: 4168019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

b9a7894e-5c1c-402b-b201-b60d3cf5e994
SIO_000300: 1
SIO_000628: feature:4167820-4168019:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 4343818..4344017
location: region:4343818-4344017:1
BFO_0000051: feature:4343818-4344017:1:region
SIO_000974: 735aeb71-af57-4d3c-b0f0-16a7152fc3b7

position:4343818:1
position: 4343818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4344017:1
position: 4344017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

735aeb71-af57-4d3c-b0f0-16a7152fc3b7
SIO_000300: 1
SIO_000628: feature:4343818-4344017:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 4461841..4462040
location: region:4461841-4462040:1
BFO_0000051: feature:4461841-4462040:1:region
SIO_000974: 57eebe5e-9779-48a0-9bd6-010530daf42d

position:4461841:1
position: 4461841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4462040:1
position: 4462040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

57eebe5e-9779-48a0-9bd6-010530daf42d
SIO_000300: 1
SIO_000628: feature:4461841-4462040:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 7419362..7419561
location: region:7419362-7419561:1
BFO_0000051: feature:7419362-7419561:1:region
SIO_000974: 437bdb01-c836-47b4-9ff6-95f0628c0dd1

position:7419362:1
position: 7419362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7419561:1
position: 7419561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

437bdb01-c836-47b4-9ff6-95f0628c0dd1
SIO_000300: 1
SIO_000628: feature:7419362-7419561:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 7911887..7912086
location: region:7911887-7912086:1
BFO_0000051: feature:7911887-7912086:1:region
SIO_000974: b994e5b6-146f-4828-8c5b-2307d677d435

position:7911887:1
position: 7911887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7912086:1
position: 7912086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

b994e5b6-146f-4828-8c5b-2307d677d435
SIO_000300: 1
SIO_000628: feature:7911887-7912086:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 8226763..8226962
location: region:8226763-8226962:1
BFO_0000051: feature:8226763-8226962:1:region
SIO_000974: 3d8e53b3-5d6a-4327-9874-dbe9e06de3a0

position:8226763:1
position: 8226763
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8226962:1
position: 8226962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

3d8e53b3-5d6a-4327-9874-dbe9e06de3a0
SIO_000300: 1
SIO_000628: feature:8226763-8226962:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 8569673..8569872
location: region:8569673-8569872:1
BFO_0000051: feature:8569673-8569872:1:region
SIO_000974: 78291bea-ba9b-47e7-bd04-12804e073c40

position:8569673:1
position: 8569673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8569872:1
position: 8569872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

78291bea-ba9b-47e7-bd04-12804e073c40
SIO_000300: 1
SIO_000628: feature:8569673-8569872:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 12188984..12189183
location: region:12188984-12189183:1
BFO_0000051: feature:12188984-12189183:1:region
SIO_000974: 259ce066-0361-4c9b-9b04-446b79ac6950

position:12188984:1
position: 12188984
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12189183:1
position: 12189183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

259ce066-0361-4c9b-9b04-446b79ac6950
SIO_000300: 1
SIO_000628: feature:12188984-12189183:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 13142895..13143094
location: region:13142895-13143094:1
BFO_0000051: feature:13142895-13143094:1:region
SIO_000974: 0801bf21-7702-4f92-8ee7-934299f0fc20

position:13142895:1
position: 13142895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13143094:1
position: 13143094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

0801bf21-7702-4f92-8ee7-934299f0fc20
SIO_000300: 1
SIO_000628: feature:13142895-13143094:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 14316767..14316966
location: region:14316767-14316966:1
BFO_0000051: feature:14316767-14316966:1:region
SIO_000974: cec94469-9f1f-407b-bf8b-04f07e6ac247

position:14316767:1
position: 14316767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14316966:1
position: 14316966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

cec94469-9f1f-407b-bf8b-04f07e6ac247
SIO_000300: 1
SIO_000628: feature:14316767-14316966:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 14638568..14638767
location: region:14638568-14638767:1
BFO_0000051: feature:14638568-14638767:1:region
SIO_000974: ad967e9f-ceb8-4b67-a2e9-631c95d05510

position:14638568:1
position: 14638568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14638767:1
position: 14638767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ad967e9f-ceb8-4b67-a2e9-631c95d05510
SIO_000300: 1
SIO_000628: feature:14638568-14638767:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 16245548..16245747
location: region:16245548-16245747:1
BFO_0000051: feature:16245548-16245747:1:region
SIO_000974: 71debed2-d982-40f9-bdbe-cc3947baf3f4

position:16245548:1
position: 16245548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16245747:1
position: 16245747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

71debed2-d982-40f9-bdbe-cc3947baf3f4
SIO_000300: 1
SIO_000628: feature:16245548-16245747:1:region

Yponomeuta sedellus genome assembly, chromosome: 25.
type: Entry
definition: Yponomeuta sedellus genome assembly, chromosome: 25.
sequence version: OW203746.1
sequence date: 2022-03-27
sequence: sequence
division: INV
source: Yponomeuta sedellus
organism: Yponomeuta sedellus
taxonomy: Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Lepidoptera; Glossata; Ditrysia; Yponomeutoidea; Yponomeutidae; Yponomeutinae; Yponomeuta.
reference: 1
comment: The assembly ilYpoSedl1.1 is based on 31x PacBio data and Arima2\nHi-C data\ngenerated by the Darwin Tree of Life Project\n(https://www.darwintreeoflife.org/). The assembly process included\nthe\nfollowing sequence of steps: initial PacBio assembly generation\nwith\nHifiasm, retained haplotig separation with purge_dups, and Hi-C\nbased\nscaffolding with YaHS. The mitochondrial genome was assembled using\nMitoHiFi. Finally, the assembly was analysed and manually improved\nusing\nrapid curation. Chromosome-scale scaffolds confirmed by the Hi-C\ndata have\nbeen named in order of size.

sequence
subclass of: SO_0000001
sequence length: 15780076
topology: linear
RO_0000086: SO_0000987
location: 1..15780076
location: region:1-15780076:1
RO_0002162: 263933

1
journal: Submitted (19-MAR-2022) to the INSDC. WELLCOME SANGER INSTITUTE, Tree of Life, Wellcome Genome Campus, Hinxton CB10 1SA, United Kingdom

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15780076:1
position: 15780076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-15780076:1:source
BFO_0000050: sequence
organism: Yponomeuta sedellus
chromosome: 25
mol type: genomic DNA

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 785157..785356
location: region:785157-785356:1
BFO_0000051: feature:785157-785356:1:region
SIO_000974: a36ea91a-b832-413e-9a15-fc6be4c6340f

position:785157:1
position: 785157
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:785356:1
position: 785356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

a36ea91a-b832-413e-9a15-fc6be4c6340f
SIO_000300: 1
SIO_000628: feature:785157-785356:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 4056643..4056842
location: region:4056643-4056842:1
BFO_0000051: feature:4056643-4056842:1:region
SIO_000974: d41a265c-fef1-4485-95d6-876cd959ba8e

position:4056643:1
position: 4056643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4056842:1
position: 4056842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

d41a265c-fef1-4485-95d6-876cd959ba8e
SIO_000300: 1
SIO_000628: feature:4056643-4056842:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 4256988..4257187
location: region:4256988-4257187:1
BFO_0000051: feature:4256988-4257187:1:region
SIO_000974: aa2209cf-50cd-4e98-8543-93fb193aa3e9

position:4256988:1
position: 4256988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4257187:1
position: 4257187
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

aa2209cf-50cd-4e98-8543-93fb193aa3e9
SIO_000300: 1
SIO_000628: feature:4256988-4257187:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 8683958..8684157
location: region:8683958-8684157:1
BFO_0000051: feature:8683958-8684157:1:region
SIO_000974: 47fb0eab-34e5-4e13-82f6-2ce94f3dc4ee

position:8683958:1
position: 8683958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8684157:1
position: 8684157
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

47fb0eab-34e5-4e13-82f6-2ce94f3dc4ee
SIO_000300: 1
SIO_000628: feature:8683958-8684157:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 10944520..10944719
location: region:10944520-10944719:1
BFO_0000051: feature:10944520-10944719:1:region
SIO_000974: c4512b91-f62d-4a99-b458-77c4b39d0a3b

position:10944520:1
position: 10944520
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10944719:1
position: 10944719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

c4512b91-f62d-4a99-b458-77c4b39d0a3b
SIO_000300: 1
SIO_000628: feature:10944520-10944719:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 12198237..12198436
location: region:12198237-12198436:1
BFO_0000051: feature:12198237-12198436:1:region
SIO_000974: 08ff1547-d5db-4bbb-9e99-61017f77f3d2

position:12198237:1
position: 12198237
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12198436:1
position: 12198436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

08ff1547-d5db-4bbb-9e99-61017f77f3d2
SIO_000300: 1
SIO_000628: feature:12198237-12198436:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 13248238..13248437
location: region:13248238-13248437:1
BFO_0000051: feature:13248238-13248437:1:region
SIO_000974: 43064268-a667-45d1-aa31-a1ee60a668ac

position:13248238:1
position: 13248238
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13248437:1
position: 13248437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

43064268-a667-45d1-aa31-a1ee60a668ac
SIO_000300: 1
SIO_000628: feature:13248238-13248437:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 14014711..14014910
location: region:14014711-14014910:1
BFO_0000051: feature:14014711-14014910:1:region
SIO_000974: b567dac3-adb3-4760-b725-8e04e7268538

position:14014711:1
position: 14014711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14014910:1
position: 14014910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

b567dac3-adb3-4760-b725-8e04e7268538
SIO_000300: 1
SIO_000628: feature:14014711-14014910:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 14523168..14523367
location: region:14523168-14523367:1
BFO_0000051: feature:14523168-14523367:1:region
SIO_000974: 1d0e8b49-ba75-4dc9-bcea-ec7c3d79effa

position:14523168:1
position: 14523168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14523367:1
position: 14523367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

1d0e8b49-ba75-4dc9-bcea-ec7c3d79effa
SIO_000300: 1
SIO_000628: feature:14523168-14523367:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 14577418..14577617
location: region:14577418-14577617:1
BFO_0000051: feature:14577418-14577617:1:region
SIO_000974: 80177b8b-fc54-4a28-be3e-02c0bfdc5e40

position:14577418:1
position: 14577418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14577617:1
position: 14577617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

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SIO_000300: 1
SIO_000628: feature:14577418-14577617:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 14758973..14759172
location: region:14758973-14759172:1
BFO_0000051: feature:14758973-14759172:1:region
SIO_000974: 2f148c1a-1eee-429c-b6a5-e67f0603789f

position:14758973:1
position: 14758973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14759172:1
position: 14759172
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

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SIO_000300: 1
SIO_000628: feature:14758973-14759172:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 14790877..14791076
location: region:14790877-14791076:1
BFO_0000051: feature:14790877-14791076:1:region
SIO_000974: 42fa324f-653b-4f43-abb3-c4481b8075ff

position:14790877:1
position: 14790877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14791076:1
position: 14791076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

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SIO_000300: 1
SIO_000628: feature:14790877-14791076:1:region

Yponomeuta sedellus genome assembly, chromosome: 26.
type: Entry
definition: Yponomeuta sedellus genome assembly, chromosome: 26.
sequence version: OW203747.1
sequence date: 2022-03-27
sequence: sequence
division: INV
source: Yponomeuta sedellus
organism: Yponomeuta sedellus
taxonomy: Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Lepidoptera; Glossata; Ditrysia; Yponomeutoidea; Yponomeutidae; Yponomeutinae; Yponomeuta.
reference: 1
comment: The assembly ilYpoSedl1.1 is based on 31x PacBio data and Arima2\nHi-C data\ngenerated by the Darwin Tree of Life Project\n(https://www.darwintreeoflife.org/). The assembly process included\nthe\nfollowing sequence of steps: initial PacBio assembly generation\nwith\nHifiasm, retained haplotig separation with purge_dups, and Hi-C\nbased\nscaffolding with YaHS. The mitochondrial genome was assembled using\nMitoHiFi. Finally, the assembly was analysed and manually improved\nusing\nrapid curation. Chromosome-scale scaffolds confirmed by the Hi-C\ndata have\nbeen named in order of size.

sequence
subclass of: SO_0000001
sequence length: 14601204
topology: linear
RO_0000086: SO_0000987
location: 1..14601204
location: region:1-14601204:1
RO_0002162: 263933

1
journal: Submitted (19-MAR-2022) to the INSDC. WELLCOME SANGER INSTITUTE, Tree of Life, Wellcome Genome Campus, Hinxton CB10 1SA, United Kingdom

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14601204:1
position: 14601204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-14601204:1:source
BFO_0000050: sequence
organism: Yponomeuta sedellus
chromosome: 26
mol type: genomic DNA

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 1851456..1851655
location: region:1851456-1851655:1
BFO_0000051: feature:1851456-1851655:1:region
SIO_000974: 3f9ad908-f87f-46c6-8324-5956b5f62842

position:1851456:1
position: 1851456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1851655:1
position: 1851655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

3f9ad908-f87f-46c6-8324-5956b5f62842
SIO_000300: 1
SIO_000628: feature:1851456-1851655:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 2225514..2225713
location: region:2225514-2225713:1
BFO_0000051: feature:2225514-2225713:1:region
SIO_000974: 712233f7-b940-4f63-af1e-81aba1371565

position:2225514:1
position: 2225514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2225713:1
position: 2225713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

712233f7-b940-4f63-af1e-81aba1371565
SIO_000300: 1
SIO_000628: feature:2225514-2225713:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 2712124..2712323
location: region:2712124-2712323:1
BFO_0000051: feature:2712124-2712323:1:region
SIO_000974: e09cff88-0868-4eb4-ad7c-0d461ccc9bb5

position:2712124:1
position: 2712124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2712323:1
position: 2712323
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

e09cff88-0868-4eb4-ad7c-0d461ccc9bb5
SIO_000300: 1
SIO_000628: feature:2712124-2712323:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 4995157..4995356
location: region:4995157-4995356:1
BFO_0000051: feature:4995157-4995356:1:region
SIO_000974: 57ccc02e-5709-4536-9d3e-639e4c4add4e

position:4995157:1
position: 4995157
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4995356:1
position: 4995356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

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SIO_000300: 1
SIO_000628: feature:4995157-4995356:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 8482866..8483065
location: region:8482866-8483065:1
BFO_0000051: feature:8482866-8483065:1:region
SIO_000974: 2a2790f2-5f45-4732-8acb-29e9ab43d7f6

position:8482866:1
position: 8482866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8483065:1
position: 8483065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

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SIO_000300: 1
SIO_000628: feature:8482866-8483065:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 10559492..10559691
location: region:10559492-10559691:1
BFO_0000051: feature:10559492-10559691:1:region
SIO_000974: a5a983bc-7a43-4bbd-9f86-9163218da72c

position:10559492:1
position: 10559492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10559691:1
position: 10559691
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

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SIO_000300: 1
SIO_000628: feature:10559492-10559691:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 11129194..11129393
location: region:11129194-11129393:1
BFO_0000051: feature:11129194-11129393:1:region
SIO_000974: 76b0f9eb-67a7-4229-aff7-87ed743137e7

position:11129194:1
position: 11129194
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11129393:1
position: 11129393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

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SIO_000300: 1
SIO_000628: feature:11129194-11129393:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 14120188..14120387
location: region:14120188-14120387:1
BFO_0000051: feature:14120188-14120387:1:region
SIO_000974: afad830a-91b8-4e4c-ae6a-f89f5b32ee26

position:14120188:1
position: 14120188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14120387:1
position: 14120387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

afad830a-91b8-4e4c-ae6a-f89f5b32ee26
SIO_000300: 1
SIO_000628: feature:14120188-14120387:1:region

Yponomeuta sedellus genome assembly, chromosome: 27.
type: Entry
definition: Yponomeuta sedellus genome assembly, chromosome: 27.
sequence version: OW203748.1
sequence date: 2022-03-27
sequence: sequence
division: INV
source: Yponomeuta sedellus
organism: Yponomeuta sedellus
taxonomy: Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Lepidoptera; Glossata; Ditrysia; Yponomeutoidea; Yponomeutidae; Yponomeutinae; Yponomeuta.
reference: 1
comment: The assembly ilYpoSedl1.1 is based on 31x PacBio data and Arima2\nHi-C data\ngenerated by the Darwin Tree of Life Project\n(https://www.darwintreeoflife.org/). The assembly process included\nthe\nfollowing sequence of steps: initial PacBio assembly generation\nwith\nHifiasm, retained haplotig separation with purge_dups, and Hi-C\nbased\nscaffolding with YaHS. The mitochondrial genome was assembled using\nMitoHiFi. Finally, the assembly was analysed and manually improved\nusing\nrapid curation. Chromosome-scale scaffolds confirmed by the Hi-C\ndata have\nbeen named in order of size.

sequence
subclass of: SO_0000001
sequence length: 12372770
topology: linear
RO_0000086: SO_0000987
location: 1..12372770
location: region:1-12372770:1
RO_0002162: 263933

1
journal: Submitted (19-MAR-2022) to the INSDC. WELLCOME SANGER INSTITUTE, Tree of Life, Wellcome Genome Campus, Hinxton CB10 1SA, United Kingdom

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12372770:1
position: 12372770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-12372770:1:source
BFO_0000050: sequence
organism: Yponomeuta sedellus
chromosome: 27
mol type: genomic DNA

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 318001..318200
location: region:318001-318200:1
BFO_0000051: feature:318001-318200:1:region
SIO_000974: 63521141-8e77-4ece-898d-ce9934ef7fb7

position:318001:1
position: 318001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:318200:1
position: 318200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

63521141-8e77-4ece-898d-ce9934ef7fb7
SIO_000300: 1
SIO_000628: feature:318001-318200:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 1383173..1383372
location: region:1383173-1383372:1
BFO_0000051: feature:1383173-1383372:1:region
SIO_000974: ddd7c3d7-846e-4fdc-a26e-c0bfb81be81f

position:1383173:1
position: 1383173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1383372:1
position: 1383372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ddd7c3d7-846e-4fdc-a26e-c0bfb81be81f
SIO_000300: 1
SIO_000628: feature:1383173-1383372:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 2504183..2504382
location: region:2504183-2504382:1
BFO_0000051: feature:2504183-2504382:1:region
SIO_000974: 8d6822de-d1e4-4a20-ac72-0109ed1250a0

position:2504183:1
position: 2504183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2504382:1
position: 2504382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

8d6822de-d1e4-4a20-ac72-0109ed1250a0
SIO_000300: 1
SIO_000628: feature:2504183-2504382:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 2677091..2677290
location: region:2677091-2677290:1
BFO_0000051: feature:2677091-2677290:1:region
SIO_000974: a462d6eb-059a-4ced-b4b3-b869d1dc17d9

position:2677091:1
position: 2677091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2677290:1
position: 2677290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

a462d6eb-059a-4ced-b4b3-b869d1dc17d9
SIO_000300: 1
SIO_000628: feature:2677091-2677290:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 3282804..3283003
location: region:3282804-3283003:1
BFO_0000051: feature:3282804-3283003:1:region
SIO_000974: c95f28fd-9808-4c65-8c5e-b6156d7b20a6

position:3282804:1
position: 3282804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3283003:1
position: 3283003
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

c95f28fd-9808-4c65-8c5e-b6156d7b20a6
SIO_000300: 1
SIO_000628: feature:3282804-3283003:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 3594012..3594211
location: region:3594012-3594211:1
BFO_0000051: feature:3594012-3594211:1:region
SIO_000974: 425c3c6b-8d27-4a40-85e5-7308974ec189

position:3594012:1
position: 3594012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3594211:1
position: 3594211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

425c3c6b-8d27-4a40-85e5-7308974ec189
SIO_000300: 1
SIO_000628: feature:3594012-3594211:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 7198708..7198907
location: region:7198708-7198907:1
BFO_0000051: feature:7198708-7198907:1:region
SIO_000974: af8eacf7-6364-4e84-89aa-9d1afcedeef0

position:7198708:1
position: 7198708
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7198907:1
position: 7198907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

af8eacf7-6364-4e84-89aa-9d1afcedeef0
SIO_000300: 1
SIO_000628: feature:7198708-7198907:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 7322489..7322688
location: region:7322489-7322688:1
BFO_0000051: feature:7322489-7322688:1:region
SIO_000974: 4ee7117f-797f-44bb-8987-2b67bef018d2

position:7322489:1
position: 7322489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7322688:1
position: 7322688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

4ee7117f-797f-44bb-8987-2b67bef018d2
SIO_000300: 1
SIO_000628: feature:7322489-7322688:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 9874594..9874793
location: region:9874594-9874793:1
BFO_0000051: feature:9874594-9874793:1:region
SIO_000974: 2b2d4c43-2a66-420f-a832-9ed9ec0b2c17

position:9874594:1
position: 9874594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9874793:1
position: 9874793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

2b2d4c43-2a66-420f-a832-9ed9ec0b2c17
SIO_000300: 1
SIO_000628: feature:9874594-9874793:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 11716092..11716291
location: region:11716092-11716291:1
BFO_0000051: feature:11716092-11716291:1:region
SIO_000974: 01c517b0-d576-46be-a738-f21659148eff

position:11716092:1
position: 11716092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11716291:1
position: 11716291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

01c517b0-d576-46be-a738-f21659148eff
SIO_000300: 1
SIO_000628: feature:11716092-11716291:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 11807451..11807650
location: region:11807451-11807650:1
BFO_0000051: feature:11807451-11807650:1:region
SIO_000974: 31e55243-fe47-4a5b-bcc5-60cca8111fbe

position:11807451:1
position: 11807451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11807650:1
position: 11807650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

31e55243-fe47-4a5b-bcc5-60cca8111fbe
SIO_000300: 1
SIO_000628: feature:11807451-11807650:1:region

Yponomeuta sedellus genome assembly, chromosome: 28.
type: Entry
definition: Yponomeuta sedellus genome assembly, chromosome: 28.
sequence version: OW203749.1
sequence date: 2022-03-27
sequence: sequence
division: INV
source: Yponomeuta sedellus
organism: Yponomeuta sedellus
taxonomy: Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Lepidoptera; Glossata; Ditrysia; Yponomeutoidea; Yponomeutidae; Yponomeutinae; Yponomeuta.
reference: 1
comment: The assembly ilYpoSedl1.1 is based on 31x PacBio data and Arima2\nHi-C data\ngenerated by the Darwin Tree of Life Project\n(https://www.darwintreeoflife.org/). The assembly process included\nthe\nfollowing sequence of steps: initial PacBio assembly generation\nwith\nHifiasm, retained haplotig separation with purge_dups, and Hi-C\nbased\nscaffolding with YaHS. The mitochondrial genome was assembled using\nMitoHiFi. Finally, the assembly was analysed and manually improved\nusing\nrapid curation. Chromosome-scale scaffolds confirmed by the Hi-C\ndata have\nbeen named in order of size.

sequence
subclass of: SO_0000001
sequence length: 10643271
topology: linear
RO_0000086: SO_0000987
location: 1..10643271
location: region:1-10643271:1
RO_0002162: 263933

1
journal: Submitted (19-MAR-2022) to the INSDC. WELLCOME SANGER INSTITUTE, Tree of Life, Wellcome Genome Campus, Hinxton CB10 1SA, United Kingdom

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10643271:1
position: 10643271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-10643271:1:source
BFO_0000050: sequence
organism: Yponomeuta sedellus
chromosome: 28
mol type: genomic DNA

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 2102104..2102303
location: region:2102104-2102303:1
BFO_0000051: feature:2102104-2102303:1:region
SIO_000974: d7817551-8c8a-4cb8-8371-c11c776c30c5

position:2102104:1
position: 2102104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2102303:1
position: 2102303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

d7817551-8c8a-4cb8-8371-c11c776c30c5
SIO_000300: 1
SIO_000628: feature:2102104-2102303:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 5375081..5375280
location: region:5375081-5375280:1
BFO_0000051: feature:5375081-5375280:1:region
SIO_000974: b5e6c922-1c9d-42a7-9ad3-29e8ee6bdc49

position:5375081:1
position: 5375081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5375280:1
position: 5375280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

b5e6c922-1c9d-42a7-9ad3-29e8ee6bdc49
SIO_000300: 1
SIO_000628: feature:5375081-5375280:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 5419524..5419723
location: region:5419524-5419723:1
BFO_0000051: feature:5419524-5419723:1:region
SIO_000974: 5a22e1d0-8b8a-497a-8ed3-589c7a76ba1a

position:5419524:1
position: 5419524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5419723:1
position: 5419723
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

5a22e1d0-8b8a-497a-8ed3-589c7a76ba1a
SIO_000300: 1
SIO_000628: feature:5419524-5419723:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 5603918..5604117
location: region:5603918-5604117:1
BFO_0000051: feature:5603918-5604117:1:region
SIO_000974: f40ea663-a8ec-405c-b9dd-feb1ebef32b4

position:5603918:1
position: 5603918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5604117:1
position: 5604117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

f40ea663-a8ec-405c-b9dd-feb1ebef32b4
SIO_000300: 1
SIO_000628: feature:5603918-5604117:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 5678858..5679057
location: region:5678858-5679057:1
BFO_0000051: feature:5678858-5679057:1:region
SIO_000974: d6e258d5-f4c7-4fcf-aac0-04ffc8cea85c

position:5678858:1
position: 5678858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5679057:1
position: 5679057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

d6e258d5-f4c7-4fcf-aac0-04ffc8cea85c
SIO_000300: 1
SIO_000628: feature:5678858-5679057:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 7159058..7159257
location: region:7159058-7159257:1
BFO_0000051: feature:7159058-7159257:1:region
SIO_000974: 265f79ca-4442-486a-a935-e7f3cfc6f1d2

position:7159058:1
position: 7159058
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7159257:1
position: 7159257
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

265f79ca-4442-486a-a935-e7f3cfc6f1d2
SIO_000300: 1
SIO_000628: feature:7159058-7159257:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 9395258..9395457
location: region:9395258-9395457:1
BFO_0000051: feature:9395258-9395457:1:region
SIO_000974: 3d597f89-7c2a-4679-a605-6add424d91d3

position:9395258:1
position: 9395258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9395457:1
position: 9395457
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

3d597f89-7c2a-4679-a605-6add424d91d3
SIO_000300: 1
SIO_000628: feature:9395258-9395457:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 9452321..9452520
location: region:9452321-9452520:1
BFO_0000051: feature:9452321-9452520:1:region
SIO_000974: a9bb7179-4d16-4dfd-8791-cd8e76d1cec4

position:9452321:1
position: 9452321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9452520:1
position: 9452520
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

a9bb7179-4d16-4dfd-8791-cd8e76d1cec4
SIO_000300: 1
SIO_000628: feature:9452321-9452520:1:region

Yponomeuta sedellus genome assembly, chromosome: 29.
type: Entry
definition: Yponomeuta sedellus genome assembly, chromosome: 29.
sequence version: OW203750.1
sequence date: 2022-03-27
sequence: sequence
division: INV
source: Yponomeuta sedellus
organism: Yponomeuta sedellus
taxonomy: Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Lepidoptera; Glossata; Ditrysia; Yponomeutoidea; Yponomeutidae; Yponomeutinae; Yponomeuta.
reference: 1
comment: The assembly ilYpoSedl1.1 is based on 31x PacBio data and Arima2\nHi-C data\ngenerated by the Darwin Tree of Life Project\n(https://www.darwintreeoflife.org/). The assembly process included\nthe\nfollowing sequence of steps: initial PacBio assembly generation\nwith\nHifiasm, retained haplotig separation with purge_dups, and Hi-C\nbased\nscaffolding with YaHS. The mitochondrial genome was assembled using\nMitoHiFi. Finally, the assembly was analysed and manually improved\nusing\nrapid curation. Chromosome-scale scaffolds confirmed by the Hi-C\ndata have\nbeen named in order of size.

sequence
subclass of: SO_0000001
sequence length: 10331871
topology: linear
RO_0000086: SO_0000987
location: 1..10331871
location: region:1-10331871:1
RO_0002162: 263933

1
journal: Submitted (19-MAR-2022) to the INSDC. WELLCOME SANGER INSTITUTE, Tree of Life, Wellcome Genome Campus, Hinxton CB10 1SA, United Kingdom

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10331871:1
position: 10331871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-10331871:1:source
BFO_0000050: sequence
organism: Yponomeuta sedellus
chromosome: 29
mol type: genomic DNA

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 561537..561736
location: region:561537-561736:1
BFO_0000051: feature:561537-561736:1:region
SIO_000974: 4a5f6b5f-d220-44f3-abf6-285ffb9137ee

position:561537:1
position: 561537
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:561736:1
position: 561736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

4a5f6b5f-d220-44f3-abf6-285ffb9137ee
SIO_000300: 1
SIO_000628: feature:561537-561736:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 616541..616740
location: region:616541-616740:1
BFO_0000051: feature:616541-616740:1:region
SIO_000974: 8660620a-a02a-4c88-8eb3-f7caf42e9e69

position:616541:1
position: 616541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:616740:1
position: 616740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

8660620a-a02a-4c88-8eb3-f7caf42e9e69
SIO_000300: 1
SIO_000628: feature:616541-616740:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 683544..683743
location: region:683544-683743:1
BFO_0000051: feature:683544-683743:1:region
SIO_000974: d02c0d0d-e7f7-4a5f-94af-725e18138ba5

position:683544:1
position: 683544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:683743:1
position: 683743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

d02c0d0d-e7f7-4a5f-94af-725e18138ba5
SIO_000300: 1
SIO_000628: feature:683544-683743:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 950941..951140
location: region:950941-951140:1
BFO_0000051: feature:950941-951140:1:region
SIO_000974: 1faee53e-e00d-4192-8bac-418059c13005

position:950941:1
position: 950941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:951140:1
position: 951140
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

1faee53e-e00d-4192-8bac-418059c13005
SIO_000300: 1
SIO_000628: feature:950941-951140:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 1592566..1592765
location: region:1592566-1592765:1
BFO_0000051: feature:1592566-1592765:1:region
SIO_000974: 1b3f3dfe-a34a-455e-9a42-7397a5fbd46e

position:1592566:1
position: 1592566
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1592765:1
position: 1592765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

1b3f3dfe-a34a-455e-9a42-7397a5fbd46e
SIO_000300: 1
SIO_000628: feature:1592566-1592765:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 2728648..2728847
location: region:2728648-2728847:1
BFO_0000051: feature:2728648-2728847:1:region
SIO_000974: 14253f85-21d6-456e-b789-14803fae3d66

position:2728648:1
position: 2728648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2728847:1
position: 2728847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

14253f85-21d6-456e-b789-14803fae3d66
SIO_000300: 1
SIO_000628: feature:2728648-2728847:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 3404920..3405119
location: region:3404920-3405119:1
BFO_0000051: feature:3404920-3405119:1:region
SIO_000974: 6c3f4b76-cfa1-4769-92d3-bb4ac0e3d4b9

position:3404920:1
position: 3404920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3405119:1
position: 3405119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

6c3f4b76-cfa1-4769-92d3-bb4ac0e3d4b9
SIO_000300: 1
SIO_000628: feature:3404920-3405119:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 4653120..4653319
location: region:4653120-4653319:1
BFO_0000051: feature:4653120-4653319:1:region
SIO_000974: d0e14876-a9c9-4a1d-bd12-a445e5a564a0

position:4653120:1
position: 4653120
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4653319:1
position: 4653319
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

d0e14876-a9c9-4a1d-bd12-a445e5a564a0
SIO_000300: 1
SIO_000628: feature:4653120-4653319:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 5077250..5077449
location: region:5077250-5077449:1
BFO_0000051: feature:5077250-5077449:1:region
SIO_000974: 86ff809f-dbba-48ec-9d7e-ba7365a79a0d

position:5077250:1
position: 5077250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5077449:1
position: 5077449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

86ff809f-dbba-48ec-9d7e-ba7365a79a0d
SIO_000300: 1
SIO_000628: feature:5077250-5077449:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 5124799..5124998
location: region:5124799-5124998:1
BFO_0000051: feature:5124799-5124998:1:region
SIO_000974: 76261c2d-65a3-4dc7-8f9c-5b29aca567ac

position:5124799:1
position: 5124799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5124998:1
position: 5124998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

76261c2d-65a3-4dc7-8f9c-5b29aca567ac
SIO_000300: 1
SIO_000628: feature:5124799-5124998:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 5160760..5160959
location: region:5160760-5160959:1
BFO_0000051: feature:5160760-5160959:1:region
SIO_000974: 8816f2ef-53e8-481a-ad63-c292c2bad3e2

position:5160760:1
position: 5160760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5160959:1
position: 5160959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

8816f2ef-53e8-481a-ad63-c292c2bad3e2
SIO_000300: 1
SIO_000628: feature:5160760-5160959:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 5464392..5464591
location: region:5464392-5464591:1
BFO_0000051: feature:5464392-5464591:1:region
SIO_000974: 92da8ada-d004-4315-8f51-05a4e1fe5d4e

position:5464392:1
position: 5464392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5464591:1
position: 5464591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

92da8ada-d004-4315-8f51-05a4e1fe5d4e
SIO_000300: 1
SIO_000628: feature:5464392-5464591:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 5769960..5770159
location: region:5769960-5770159:1
BFO_0000051: feature:5769960-5770159:1:region
SIO_000974: aaf8f0ab-1f2f-4d59-9093-9ea0e3226626

position:5769960:1
position: 5769960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5770159:1
position: 5770159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

aaf8f0ab-1f2f-4d59-9093-9ea0e3226626
SIO_000300: 1
SIO_000628: feature:5769960-5770159:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 6033210..6033409
location: region:6033210-6033409:1
BFO_0000051: feature:6033210-6033409:1:region
SIO_000974: 6d68ab0f-e467-4c50-8411-a4cc96388261

position:6033210:1
position: 6033210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6033409:1
position: 6033409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

6d68ab0f-e467-4c50-8411-a4cc96388261
SIO_000300: 1
SIO_000628: feature:6033210-6033409:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 7529473..7529672
location: region:7529473-7529672:1
BFO_0000051: feature:7529473-7529672:1:region
SIO_000974: 58be1321-8f6a-42e8-b440-d0a1032a6a09

position:7529473:1
position: 7529473
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7529672:1
position: 7529672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

58be1321-8f6a-42e8-b440-d0a1032a6a09
SIO_000300: 1
SIO_000628: feature:7529473-7529672:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 7683018..7683217
location: region:7683018-7683217:1
BFO_0000051: feature:7683018-7683217:1:region
SIO_000974: 2e7d3882-4457-48d9-b34d-7cd94a49f83b

position:7683018:1
position: 7683018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7683217:1
position: 7683217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

2e7d3882-4457-48d9-b34d-7cd94a49f83b
SIO_000300: 1
SIO_000628: feature:7683018-7683217:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 8201920..8202119
location: region:8201920-8202119:1
BFO_0000051: feature:8201920-8202119:1:region
SIO_000974: e76548c8-9153-4377-822c-023e82c6eb21

position:8201920:1
position: 8201920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8202119:1
position: 8202119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

e76548c8-9153-4377-822c-023e82c6eb21
SIO_000300: 1
SIO_000628: feature:8201920-8202119:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 8850529..8850728
location: region:8850529-8850728:1
BFO_0000051: feature:8850529-8850728:1:region
SIO_000974: e304232e-f93d-4358-ba2e-63a49890cfc2

position:8850529:1
position: 8850529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8850728:1
position: 8850728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

e304232e-f93d-4358-ba2e-63a49890cfc2
SIO_000300: 1
SIO_000628: feature:8850529-8850728:1:region

Yponomeuta sedellus genome assembly, chromosome: 30.
type: Entry
definition: Yponomeuta sedellus genome assembly, chromosome: 30.
sequence version: OW203751.1
sequence date: 2022-03-27
sequence: sequence
division: INV
source: Yponomeuta sedellus
organism: Yponomeuta sedellus
taxonomy: Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Lepidoptera; Glossata; Ditrysia; Yponomeutoidea; Yponomeutidae; Yponomeutinae; Yponomeuta.
reference: 1
comment: The assembly ilYpoSedl1.1 is based on 31x PacBio data and Arima2\nHi-C data\ngenerated by the Darwin Tree of Life Project\n(https://www.darwintreeoflife.org/). The assembly process included\nthe\nfollowing sequence of steps: initial PacBio assembly generation\nwith\nHifiasm, retained haplotig separation with purge_dups, and Hi-C\nbased\nscaffolding with YaHS. The mitochondrial genome was assembled using\nMitoHiFi. Finally, the assembly was analysed and manually improved\nusing\nrapid curation. Chromosome-scale scaffolds confirmed by the Hi-C\ndata have\nbeen named in order of size.

sequence
subclass of: SO_0000001
sequence length: 10405537
topology: linear
RO_0000086: SO_0000987
location: 1..10405537
location: region:1-10405537:1
RO_0002162: 263933

1
journal: Submitted (19-MAR-2022) to the INSDC. WELLCOME SANGER INSTITUTE, Tree of Life, Wellcome Genome Campus, Hinxton CB10 1SA, United Kingdom

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10405537:1
position: 10405537
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-10405537:1:source
BFO_0000050: sequence
organism: Yponomeuta sedellus
chromosome: 30
mol type: genomic DNA

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 716048..716247
location: region:716048-716247:1
BFO_0000051: feature:716048-716247:1:region
SIO_000974: eca60f73-c1f5-4ff2-9ff6-4e14ebce46b8

position:716048:1
position: 716048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:716247:1
position: 716247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

eca60f73-c1f5-4ff2-9ff6-4e14ebce46b8
SIO_000300: 1
SIO_000628: feature:716048-716247:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 1120622..1120821
location: region:1120622-1120821:1
BFO_0000051: feature:1120622-1120821:1:region
SIO_000974: dd6e2c07-2373-4603-a112-15042d105a95

position:1120622:1
position: 1120622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1120821:1
position: 1120821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

dd6e2c07-2373-4603-a112-15042d105a95
SIO_000300: 1
SIO_000628: feature:1120622-1120821:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 3768764..3768963
location: region:3768764-3768963:1
BFO_0000051: feature:3768764-3768963:1:region
SIO_000974: e417171b-b882-4352-80a0-8c51ecd1d9c5

position:3768764:1
position: 3768764
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3768963:1
position: 3768963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

e417171b-b882-4352-80a0-8c51ecd1d9c5
SIO_000300: 1
SIO_000628: feature:3768764-3768963:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 4013518..4013717
location: region:4013518-4013717:1
BFO_0000051: feature:4013518-4013717:1:region
SIO_000974: 8bed8416-ffee-45a3-b507-a7a4ad482aa7

position:4013518:1
position: 4013518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4013717:1
position: 4013717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

8bed8416-ffee-45a3-b507-a7a4ad482aa7
SIO_000300: 1
SIO_000628: feature:4013518-4013717:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 6228511..6228710
location: region:6228511-6228710:1
BFO_0000051: feature:6228511-6228710:1:region
SIO_000974: a0b59a25-1399-41db-823f-0659bd3ffe4d

position:6228511:1
position: 6228511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6228710:1
position: 6228710
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

a0b59a25-1399-41db-823f-0659bd3ffe4d
SIO_000300: 1
SIO_000628: feature:6228511-6228710:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 7495621..7495820
location: region:7495621-7495820:1
BFO_0000051: feature:7495621-7495820:1:region
SIO_000974: 209384ed-3551-45f3-85eb-82c23aa498ee

position:7495621:1
position: 7495621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7495820:1
position: 7495820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

209384ed-3551-45f3-85eb-82c23aa498ee
SIO_000300: 1
SIO_000628: feature:7495621-7495820:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 8194679..8194878
location: region:8194679-8194878:1
BFO_0000051: feature:8194679-8194878:1:region
SIO_000974: 8b4f3d53-2e2d-4402-bace-8fe39ae19701

position:8194679:1
position: 8194679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8194878:1
position: 8194878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

8b4f3d53-2e2d-4402-bace-8fe39ae19701
SIO_000300: 1
SIO_000628: feature:8194679-8194878:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 8555190..8555389
location: region:8555190-8555389:1
BFO_0000051: feature:8555190-8555389:1:region
SIO_000974: 8cb18019-6c85-4917-8d9a-c196d622219b

position:8555190:1
position: 8555190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8555389:1
position: 8555389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

8cb18019-6c85-4917-8d9a-c196d622219b
SIO_000300: 1
SIO_000628: feature:8555190-8555389:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 8583520..8583719
location: region:8583520-8583719:1
BFO_0000051: feature:8583520-8583719:1:region
SIO_000974: 087993ec-248b-4937-a7b7-1769b1ae94dd

position:8583520:1
position: 8583520
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8583719:1
position: 8583719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

087993ec-248b-4937-a7b7-1769b1ae94dd
SIO_000300: 1
SIO_000628: feature:8583520-8583719:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 8638446..8638645
location: region:8638446-8638645:1
BFO_0000051: feature:8638446-8638645:1:region
SIO_000974: 393b5225-128e-44d1-a294-9f5940c48042

position:8638446:1
position: 8638446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8638645:1
position: 8638645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

393b5225-128e-44d1-a294-9f5940c48042
SIO_000300: 1
SIO_000628: feature:8638446-8638645:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 8814439..8814638
location: region:8814439-8814638:1
BFO_0000051: feature:8814439-8814638:1:region
SIO_000974: 11c28372-d39c-4389-8af7-6276fe4d4ee0

position:8814439:1
position: 8814439
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8814638:1
position: 8814638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

11c28372-d39c-4389-8af7-6276fe4d4ee0
SIO_000300: 1
SIO_000628: feature:8814439-8814638:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 263933
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 10146338..10146537
location: region:10146338-10146537:1
BFO_0000051: feature:10146338-10146537:1:region
SIO_000974: d75d12ce-7545-4164-b428-d955486fcfce

position:10146338:1
position: 10146338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10146537:1
position: 10146537
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

d75d12ce-7545-4164-b428-d955486fcfce
SIO_000300: 1
SIO_000628: feature:10146338-10146537:1:region

Yponomeuta sedellus genome assembly, organelle: mitochondrion.
type: Entry
definition: Yponomeuta sedellus genome assembly, organelle: mitochondrion.
sequence version: OW203752.1
sequence date: 2022-03-27
sequence: sequence
division: INV
source: mitochondrion Yponomeuta sedellus
organism: Yponomeuta sedellus
taxonomy: Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Lepidoptera; Glossata; Ditrysia; Yponomeutoidea; Yponomeutidae; Yponomeutinae; Yponomeuta.
reference: 1
comment: The assembly ilYpoSedl1.1 is based on 31x PacBio data and Arima2\nHi-C data\ngenerated by the Darwin Tree of Life Project\n(https://www.darwintreeoflife.org/). The assembly process included\nthe\nfollowing sequence of steps: initial PacBio assembly generation\nwith\nHifiasm, retained haplotig separation with purge_dups, and Hi-C\nbased\nscaffolding with YaHS. The mitochondrial genome was assembled using\nMitoHiFi. Finally, the assembly was analysed and manually improved\nusing\nrapid curation. Chromosome-scale scaffolds confirmed by the Hi-C\ndata have\nbeen named in order of size.

sequence
subclass of: SO_0000001
sequence length: 16390
topology: linear
RO_0000086: SO_0000987
location: 1..16390
location: region:1-16390:1
RO_0002162: 263933

1
journal: Submitted (19-MAR-2022) to the INSDC. WELLCOME SANGER INSTITUTE, Tree of Life, Wellcome Genome Campus, Hinxton CB10 1SA, United Kingdom

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16390:1
position: 16390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-16390:1:source
BFO_0000050: sequence
organism: Yponomeuta sedellus
organelle: mitochondrion
mol type: genomic DNA

Leuctra nigra genome assembly, chromosome: 1.
type: Entry
definition: Leuctra nigra genome assembly, chromosome: 1.
sequence version: OW203761.1
sequence date: 2022-03-26
sequence: sequence
division: INV
source: Leuctra nigra
organism: Leuctra nigra
taxonomy: Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Polyneoptera; Plecoptera; Nemouroidea; Leuctridae; Leuctrinae; Leuctra.
reference: 1
comment: The assembly ipLeuNigr2.1 is based on 32x PacBio data and Arima2\nHi-C data\ngenerated by the Darwin Tree of Life Project\n(https://www.darwintreeoflife.org/). The assembly process included\nthe\nfollowing sequence of steps: initial PacBio assembly generation\nwith\nHifiasm, retained haplotig separation with purge_dups, and Hi-C\nbased\nscaffolding with YaHS. The mitochondrial genome was assembled using\nMitoHifi. Finally, the assembly was analysed and manually improved\nusing\nrapid curation. Chromosome-scale scaffolds confirmed by the Hi-C\ndata have\nbeen named in order of size. chromosome X found at half coverage.\nNo Y\nchromosome found.

sequence
subclass of: SO_0000001
sequence length: 68080570
topology: linear
RO_0000086: SO_0000987
location: 1..68080570
location: region:1-68080570:1
RO_0002162: 143735

1
journal: Submitted (19-MAR-2022) to the INSDC. WELLCOME SANGER INSTITUTE, Tree of Life, Wellcome Genome Campus, Hinxton CB10 1SA, United Kingdom

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:68080570:1
position: 68080570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-68080570:1:source
BFO_0000050: sequence
organism: Leuctra nigra
chromosome: 1
mol type: genomic DNA

143735
type: Taxonomy
SIO_000068: taxonomy

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 1047702..1047901
location: region:1047702-1047901:1
BFO_0000051: feature:1047702-1047901:1:region
SIO_000974: 7a453ae4-1839-45b3-90dd-2186014b1214

position:1047702:1
position: 1047702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1047901:1
position: 1047901
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

7a453ae4-1839-45b3-90dd-2186014b1214
SIO_000300: 1
SIO_000628: feature:1047702-1047901:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 1156115..1156314
location: region:1156115-1156314:1
BFO_0000051: feature:1156115-1156314:1:region
SIO_000974: 650da93f-1eeb-4de6-aab5-68b98b24dad7

position:1156115:1
position: 1156115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1156314:1
position: 1156314
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

650da93f-1eeb-4de6-aab5-68b98b24dad7
SIO_000300: 1
SIO_000628: feature:1156115-1156314:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 1280503..1280702
location: region:1280503-1280702:1
BFO_0000051: feature:1280503-1280702:1:region
SIO_000974: d61425e7-8829-49ed-865b-6051310abe48

position:1280503:1
position: 1280503
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1280702:1
position: 1280702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

d61425e7-8829-49ed-865b-6051310abe48
SIO_000300: 1
SIO_000628: feature:1280503-1280702:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 1342982..1343181
location: region:1342982-1343181:1
BFO_0000051: feature:1342982-1343181:1:region
SIO_000974: 0321fe21-c330-4058-81a7-1c928ce53098

position:1342982:1
position: 1342982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1343181:1
position: 1343181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

0321fe21-c330-4058-81a7-1c928ce53098
SIO_000300: 1
SIO_000628: feature:1342982-1343181:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 1770412..1770611
location: region:1770412-1770611:1
BFO_0000051: feature:1770412-1770611:1:region
SIO_000974: 3a0b3d4c-f3de-49ef-b80e-6beac0b5015a

position:1770412:1
position: 1770412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1770611:1
position: 1770611
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

3a0b3d4c-f3de-49ef-b80e-6beac0b5015a
SIO_000300: 1
SIO_000628: feature:1770412-1770611:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 2178962..2179161
location: region:2178962-2179161:1
BFO_0000051: feature:2178962-2179161:1:region
SIO_000974: 69959f2d-47ac-495d-8ecd-f37c58f5c62c

position:2178962:1
position: 2178962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2179161:1
position: 2179161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

69959f2d-47ac-495d-8ecd-f37c58f5c62c
SIO_000300: 1
SIO_000628: feature:2178962-2179161:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 2457578..2457777
location: region:2457578-2457777:1
BFO_0000051: feature:2457578-2457777:1:region
SIO_000974: e5c1b429-46ff-4a18-b111-a375a2e50903

position:2457578:1
position: 2457578
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2457777:1
position: 2457777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

e5c1b429-46ff-4a18-b111-a375a2e50903
SIO_000300: 1
SIO_000628: feature:2457578-2457777:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 2544487..2544686
location: region:2544487-2544686:1
BFO_0000051: feature:2544487-2544686:1:region
SIO_000974: d13e4ca1-55a0-45c1-970a-e7ad8c00d796

position:2544487:1
position: 2544487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2544686:1
position: 2544686
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

d13e4ca1-55a0-45c1-970a-e7ad8c00d796
SIO_000300: 1
SIO_000628: feature:2544487-2544686:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 3123725..3123924
location: region:3123725-3123924:1
BFO_0000051: feature:3123725-3123924:1:region
SIO_000974: 4510e783-e9a3-4845-b87b-7b03356d6dd4

position:3123725:1
position: 3123725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3123924:1
position: 3123924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

4510e783-e9a3-4845-b87b-7b03356d6dd4
SIO_000300: 1
SIO_000628: feature:3123725-3123924:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 3149137..3149336
location: region:3149137-3149336:1
BFO_0000051: feature:3149137-3149336:1:region
SIO_000974: 655730c3-5ead-4885-b135-9c0d4c8c77ea

position:3149137:1
position: 3149137
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3149336:1
position: 3149336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

655730c3-5ead-4885-b135-9c0d4c8c77ea
SIO_000300: 1
SIO_000628: feature:3149137-3149336:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 3352766..3352965
location: region:3352766-3352965:1
BFO_0000051: feature:3352766-3352965:1:region
SIO_000974: f3f039b3-3bff-4d01-9908-1766223dc4b4

position:3352766:1
position: 3352766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3352965:1
position: 3352965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

f3f039b3-3bff-4d01-9908-1766223dc4b4
SIO_000300: 1
SIO_000628: feature:3352766-3352965:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 4061472..4061671
location: region:4061472-4061671:1
BFO_0000051: feature:4061472-4061671:1:region
SIO_000974: 181c6889-36e9-4dd2-82da-4adabd7fd157

position:4061472:1
position: 4061472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4061671:1
position: 4061671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

181c6889-36e9-4dd2-82da-4adabd7fd157
SIO_000300: 1
SIO_000628: feature:4061472-4061671:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 4792099..4792298
location: region:4792099-4792298:1
BFO_0000051: feature:4792099-4792298:1:region
SIO_000974: 59cade77-5ed6-49c6-9297-f27374ceb45e

position:4792099:1
position: 4792099
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4792298:1
position: 4792298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

59cade77-5ed6-49c6-9297-f27374ceb45e
SIO_000300: 1
SIO_000628: feature:4792099-4792298:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 5004549..5004748
location: region:5004549-5004748:1
BFO_0000051: feature:5004549-5004748:1:region
SIO_000974: bd858bad-4a72-441e-9513-53b916272ffa

position:5004549:1
position: 5004549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5004748:1
position: 5004748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

bd858bad-4a72-441e-9513-53b916272ffa
SIO_000300: 1
SIO_000628: feature:5004549-5004748:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 5607638..5607837
location: region:5607638-5607837:1
BFO_0000051: feature:5607638-5607837:1:region
SIO_000974: 862e7ff1-eed8-493b-8761-b33da5f6f501

position:5607638:1
position: 5607638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5607837:1
position: 5607837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

862e7ff1-eed8-493b-8761-b33da5f6f501
SIO_000300: 1
SIO_000628: feature:5607638-5607837:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:6335804-6336003:1:region
SIO_000974: 3a0bef6c-69c2-454d-8f3e-df52c7c94f94

position:6335804:1
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reference: sequence
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position:6336003:1
position: 6336003
reference: sequence
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3a0bef6c-69c2-454d-8f3e-df52c7c94f94
SIO_000300: 1
SIO_000628: feature:6335804-6336003:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:6441600-6441799:1:region
SIO_000974: a7a3db1f-f538-449f-a94c-339eb86bbaa9

position:6441600:1
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reference: sequence
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position:6441799:1
position: 6441799
reference: sequence
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SIO_000300: 1
SIO_000628: feature:6441600-6441799:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:7347842-7348041:1:region
SIO_000974: 5c7f5506-f89b-4e83-a943-71fb1dba5c63

position:7347842:1
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reference: sequence
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position:7348041:1
position: 7348041
reference: sequence
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SIO_000300: 1
SIO_000628: feature:7347842-7348041:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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location: region:7958100-7958299:1
BFO_0000051: feature:7958100-7958299:1:region
SIO_000974: 83ea0cbb-61e8-49fa-8ca3-6dacccefa643

position:7958100:1
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reference: sequence
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position:7958299:1
position: 7958299
reference: sequence
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SIO_000300: 1
SIO_000628: feature:7958100-7958299:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:8102544-8102743:1:region
SIO_000974: c3825e47-f232-49b9-a9a1-437114aecd83

position:8102544:1
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position:8102743:1
position: 8102743
reference: sequence
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SIO_000300: 1
SIO_000628: feature:8102544-8102743:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 8188919..8189118
location: region:8188919-8189118:1
BFO_0000051: feature:8188919-8189118:1:region
SIO_000974: fda84bf5-3f22-432e-b595-9b80b14fd99f

position:8188919:1
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reference: sequence
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position:8189118:1
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reference: sequence
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SIO_000300: 1
SIO_000628: feature:8188919-8189118:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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location: region:8776559-8776758:1
BFO_0000051: feature:8776559-8776758:1:region
SIO_000974: f124d701-27dd-4fce-ba8e-b6620121e065

position:8776559:1
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position:8776758:1
position: 8776758
reference: sequence
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SIO_000300: 1
SIO_000628: feature:8776559-8776758:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 10223373..10223572
location: region:10223373-10223572:1
BFO_0000051: feature:10223373-10223572:1:region
SIO_000974: 46b1ef5e-1d51-4c0d-848a-116c175c52f3

position:10223373:1
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reference: sequence
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position:10223572:1
position: 10223572
reference: sequence
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46b1ef5e-1d51-4c0d-848a-116c175c52f3
SIO_000300: 1
SIO_000628: feature:10223373-10223572:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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location: region:10763913-10764112:1
BFO_0000051: feature:10763913-10764112:1:region
SIO_000974: fb78ffaa-142e-42a1-aeaa-a6f72f409f28

position:10763913:1
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reference: sequence
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position:10764112:1
position: 10764112
reference: sequence
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SIO_000300: 1
SIO_000628: feature:10763913-10764112:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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location: region:11107282-11107481:1
BFO_0000051: feature:11107282-11107481:1:region
SIO_000974: c6f2c00e-f814-4a09-bc94-3891a413c2b2

position:11107282:1
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reference: sequence
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position:11107481:1
position: 11107481
reference: sequence
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SIO_000300: 1
SIO_000628: feature:11107282-11107481:1:region

assembly_gap
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subclass of: SO_0000730
RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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location: region:11422836-11423035:1
BFO_0000051: feature:11422836-11423035:1:region
SIO_000974: 33dcf1b5-18ff-4f53-93ad-2841131fe3e9

position:11422836:1
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reference: sequence
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position:11423035:1
position: 11423035
reference: sequence
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SIO_000300: 1
SIO_000628: feature:11422836-11423035:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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location: region:11674087-11674286:1
BFO_0000051: feature:11674087-11674286:1:region
SIO_000974: b4857fe8-24b7-4474-b46a-21f81c322b69

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reference: sequence
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position:11674286:1
position: 11674286
reference: sequence
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SIO_000300: 1
SIO_000628: feature:11674087-11674286:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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location: region:12127900-12128099:1
BFO_0000051: feature:12127900-12128099:1:region
SIO_000974: 3e9f51d2-1c83-4fff-bd38-66678e225a7e

position:12127900:1
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reference: sequence
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position:12128099:1
position: 12128099
reference: sequence
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SIO_000300: 1
SIO_000628: feature:12127900-12128099:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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location: region:12467268-12467467:1
BFO_0000051: feature:12467268-12467467:1:region
SIO_000974: fcc0060e-8d42-4f37-998f-5f4a9a2cf9d2

position:12467268:1
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reference: sequence
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position:12467467:1
position: 12467467
reference: sequence
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SIO_000300: 1
SIO_000628: feature:12467268-12467467:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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location: region:12864212-12864411:1
BFO_0000051: feature:12864212-12864411:1:region
SIO_000974: 627c8da6-f9df-49c9-8430-fd01716ec909

position:12864212:1
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reference: sequence
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position:12864411:1
position: 12864411
reference: sequence
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SIO_000300: 1
SIO_000628: feature:12864212-12864411:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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location: region:12924317-12924516:1
BFO_0000051: feature:12924317-12924516:1:region
SIO_000974: c1c8d6ef-d69f-4142-85c7-a4babfa3e369

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reference: sequence
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position:12924516:1
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reference: sequence
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c1c8d6ef-d69f-4142-85c7-a4babfa3e369
SIO_000300: 1
SIO_000628: feature:12924317-12924516:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 13205119..13205318
location: region:13205119-13205318:1
BFO_0000051: feature:13205119-13205318:1:region
SIO_000974: 8dc351ac-51f1-46d6-970e-c6dd0e30553e

position:13205119:1
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reference: sequence
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position:13205318:1
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reference: sequence
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SIO_000300: 1
SIO_000628: feature:13205119-13205318:1:region

assembly_gap
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subclass of: SO_0000730
RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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location: region:14020319-14020518:1
BFO_0000051: feature:14020319-14020518:1:region
SIO_000974: 058d834d-177c-4641-82c5-fc7bcfbf333d

position:14020319:1
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reference: sequence
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position:14020518:1
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reference: sequence
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058d834d-177c-4641-82c5-fc7bcfbf333d
SIO_000300: 1
SIO_000628: feature:14020319-14020518:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 14688033..14688232
location: region:14688033-14688232:1
BFO_0000051: feature:14688033-14688232:1:region
SIO_000974: afb637a2-d9a3-4685-bad0-5df96c63a7f7

position:14688033:1
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reference: sequence
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position:14688232:1
position: 14688232
reference: sequence
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SIO_000300: 1
SIO_000628: feature:14688033-14688232:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 15544513..15544712
location: region:15544513-15544712:1
BFO_0000051: feature:15544513-15544712:1:region
SIO_000974: 4be9ac31-d52d-4bcd-9508-ed5001324d24

position:15544513:1
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reference: sequence
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position:15544712:1
position: 15544712
reference: sequence
type: ForwardStrandPosition
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SIO_000300: 1
SIO_000628: feature:15544513-15544712:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 15775110..15775309
location: region:15775110-15775309:1
BFO_0000051: feature:15775110-15775309:1:region
SIO_000974: f5b1944f-e6a4-48a4-9904-db7abb81e763

position:15775110:1
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reference: sequence
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position:15775309:1
position: 15775309
reference: sequence
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f5b1944f-e6a4-48a4-9904-db7abb81e763
SIO_000300: 1
SIO_000628: feature:15775110-15775309:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 16486738..16486937
location: region:16486738-16486937:1
BFO_0000051: feature:16486738-16486937:1:region
SIO_000974: 82e8ff3e-0b10-4a6a-b620-c74661e5a650

position:16486738:1
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reference: sequence
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position:16486937:1
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reference: sequence
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SIO_000300: 1
SIO_000628: feature:16486738-16486937:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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location: region:16679150-16679349:1
BFO_0000051: feature:16679150-16679349:1:region
SIO_000974: 65db1bae-325c-43c6-8497-362015bbe7e1

position:16679150:1
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reference: sequence
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position:16679349:1
position: 16679349
reference: sequence
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65db1bae-325c-43c6-8497-362015bbe7e1
SIO_000300: 1
SIO_000628: feature:16679150-16679349:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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location: region:17200569-17200768:1
BFO_0000051: feature:17200569-17200768:1:region
SIO_000974: 1a1466ac-b3ab-4866-8e21-4858723efa22

position:17200569:1
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reference: sequence
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position: 17200768
reference: sequence
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1a1466ac-b3ab-4866-8e21-4858723efa22
SIO_000300: 1
SIO_000628: feature:17200569-17200768:1:region

assembly_gap
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subclass of: SO_0000730
RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 17803143..17803342
location: region:17803143-17803342:1
BFO_0000051: feature:17803143-17803342:1:region
SIO_000974: 32259ffe-b33e-4e79-915f-1b9c0c45fb08

position:17803143:1
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reference: sequence
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position: 17803342
reference: sequence
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SIO_000300: 1
SIO_000628: feature:17803143-17803342:1:region

assembly_gap
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subclass of: SO_0000730
RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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location: region:17854752-17854951:1
BFO_0000051: feature:17854752-17854951:1:region
SIO_000974: ea5a6298-8ae0-4058-b11e-3de04560a17c

position:17854752:1
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reference: sequence
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reference: sequence
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SIO_000300: 1
SIO_000628: feature:17854752-17854951:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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location: region:18315202-18315401:1
BFO_0000051: feature:18315202-18315401:1:region
SIO_000974: 1fe58e25-ffd9-4f03-a949-821afa662f20

position:18315202:1
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reference: sequence
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position: 18315401
reference: sequence
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1fe58e25-ffd9-4f03-a949-821afa662f20
SIO_000300: 1
SIO_000628: feature:18315202-18315401:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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location: region:19772701-19772900:1
BFO_0000051: feature:19772701-19772900:1:region
SIO_000974: 15025ee3-d9c1-4600-95b1-038defa53239

position:19772701:1
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reference: sequence
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reference: sequence
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15025ee3-d9c1-4600-95b1-038defa53239
SIO_000300: 1
SIO_000628: feature:19772701-19772900:1:region

assembly_gap
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subclass of: SO_0000730
RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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location: region:19985587-19985786:1
BFO_0000051: feature:19985587-19985786:1:region
SIO_000974: d9b29584-2687-4fec-a3a6-51181fcf9566

position:19985587:1
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reference: sequence
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position:19985786:1
position: 19985786
reference: sequence
type: ForwardStrandPosition
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SIO_000300: 1
SIO_000628: feature:19985587-19985786:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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location: region:20405703-20405902:1
BFO_0000051: feature:20405703-20405902:1:region
SIO_000974: f33f4b7c-fc48-4422-92bb-a7653d798099

position:20405703:1
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reference: sequence
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position: 20405902
reference: sequence
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SIO_000300: 1
SIO_000628: feature:20405703-20405902:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 20874511..20874710
location: region:20874511-20874710:1
BFO_0000051: feature:20874511-20874710:1:region
SIO_000974: 1991b7ce-bc62-4dd1-90a1-905e320a7e79

position:20874511:1
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reference: sequence
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position:20874710:1
position: 20874710
reference: sequence
type: ForwardStrandPosition
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1991b7ce-bc62-4dd1-90a1-905e320a7e79
SIO_000300: 1
SIO_000628: feature:20874511-20874710:1:region

assembly_gap
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RO_0002162: 143735
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SIO_000300: 1
SIO_000628: feature:35019757-35019956:1:region

assembly_gap
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RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:35094785-35094984:1:region
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SIO_000300: 1
SIO_000628: feature:35094785-35094984:1:region

assembly_gap
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RO_0002162: 143735
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gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:36535621-36535820:1:region
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SIO_000300: 1
SIO_000628: feature:36535621-36535820:1:region

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RO_0002162: 143735
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BFO_0000050: sequence
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BFO_0000051: feature:36969193-36969392:1:region
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SIO_000300: 1
SIO_000628: feature:36969193-36969392:1:region

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RO_0002162: 143735
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BFO_0000050: sequence
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BFO_0000051: feature:37003602-37003801:1:region
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SIO_000300: 1
SIO_000628: feature:37003602-37003801:1:region

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RO_0002162: 143735
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SIO_000300: 1
SIO_000628: feature:37313730-37313929:1:region

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BFO_0000050: sequence
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BFO_0000051: feature:39220718-39220917:1:region
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SIO_000300: 1
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RO_0002162: 143735
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BFO_0000050: sequence
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BFO_0000051: feature:39457619-39457818:1:region
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SIO_000300: 1
SIO_000628: feature:39457619-39457818:1:region

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RO_0002162: 143735
estimated length: 200
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BFO_0000050: sequence
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BFO_0000051: feature:39506985-39507184:1:region
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SIO_000300: 1
SIO_000628: feature:39506985-39507184:1:region

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RO_0002162: 143735
estimated length: 200
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BFO_0000050: sequence
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BFO_0000051: feature:39529968-39530167:1:region
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SIO_000300: 1
SIO_000628: feature:39529968-39530167:1:region

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RO_0002162: 143735
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BFO_0000050: sequence
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BFO_0000051: feature:39796609-39796808:1:region
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SIO_000300: 1
SIO_000628: feature:39796609-39796808:1:region

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RO_0002162: 143735
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BFO_0000050: sequence
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BFO_0000051: feature:40089078-40089277:1:region
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SIO_000300: 1
SIO_000628: feature:40089078-40089277:1:region

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RO_0002162: 143735
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BFO_0000050: sequence
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BFO_0000051: feature:40136006-40136205:1:region
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SIO_000300: 1
SIO_000628: feature:40136006-40136205:1:region

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RO_0002162: 143735
estimated length: 200
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BFO_0000050: sequence
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BFO_0000051: feature:40179858-40180057:1:region
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SIO_000300: 1
SIO_000628: feature:40179858-40180057:1:region

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RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:40584631-40584830:1:region
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SIO_000300: 1
SIO_000628: feature:40584631-40584830:1:region

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RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:40895291-40895490:1:region
SIO_000974: 77145ee6-dc35-4d64-9f01-914dd61751fa

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SIO_000300: 1
SIO_000628: feature:40895291-40895490:1:region

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RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:41246381-41246580:1:region
SIO_000974: ad771d48-e336-48f3-b944-1700178ce7c0

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SIO_000300: 1
SIO_000628: feature:41246381-41246580:1:region

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RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:42848979-42849178:1:region
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SIO_000300: 1
SIO_000628: feature:42848979-42849178:1:region

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RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:43228623-43228822:1:region
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SIO_000300: 1
SIO_000628: feature:43228623-43228822:1:region

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RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:43311989-43312188:1:region
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SIO_000300: 1
SIO_000628: feature:43311989-43312188:1:region

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RO_0002162: 143735
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BFO_0000050: sequence
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SIO_000300: 1
SIO_000628: feature:44422449-44422648:1:region

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RO_0002162: 143735
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BFO_0000050: sequence
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BFO_0000051: feature:44742303-44742502:1:region
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SIO_000300: 1
SIO_000628: feature:44742303-44742502:1:region

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RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:45239011-45239210:1:region
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SIO_000300: 1
SIO_000628: feature:45239011-45239210:1:region

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RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:45295211-45295410:1:region
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SIO_000300: 1
SIO_000628: feature:45295211-45295410:1:region

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RO_0002162: 143735
estimated length: 200
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BFO_0000050: sequence
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BFO_0000051: feature:45776471-45776670:1:region
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SIO_000300: 1
SIO_000628: feature:45776471-45776670:1:region

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RO_0002162: 143735
estimated length: 200
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BFO_0000050: sequence
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BFO_0000051: feature:45834591-45834790:1:region
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SIO_000300: 1
SIO_000628: feature:45834591-45834790:1:region

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RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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SIO_000300: 1
SIO_000628: feature:46562247-46562446:1:region

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RO_0002162: 143735
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gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:46631268-46631467:1:region
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SIO_000300: 1
SIO_000628: feature:46631268-46631467:1:region

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RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:46899183-46899382:1:region
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SIO_000300: 1
SIO_000628: feature:46899183-46899382:1:region

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RO_0002162: 143735
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gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:47073035-47073234:1:region
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SIO_000300: 1
SIO_000628: feature:47073035-47073234:1:region

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RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:47134683-47134882:1:region
SIO_000974: 86e68734-058e-4444-9cbb-c646df089443

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reference: sequence
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SIO_000300: 1
SIO_000628: feature:47134683-47134882:1:region

assembly_gap
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RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:47219751-47219950:1:region
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position:47219950:1
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reference: sequence
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db00cff8-923a-4084-b12d-24c9489cb367
SIO_000300: 1
SIO_000628: feature:47219751-47219950:1:region

assembly_gap
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subclass of: SO_0000730
RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:47907241-47907440:1:region
SIO_000974: 90f6cc0f-add6-4174-ae53-a7901aa7bb16

position:47907241:1
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reference: sequence
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SIO_000300: 1
SIO_000628: feature:47907241-47907440:1:region

assembly_gap
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RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:48054982-48055181:1:region
SIO_000974: 4cb13692-352e-4c63-88f0-3d1978d1e5d5

position:48054982:1
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reference: sequence
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SIO_000300: 1
SIO_000628: feature:48054982-48055181:1:region

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RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:48656719-48656918:1:region
SIO_000974: ec158342-4484-41a7-a770-0b524be76c4a

position:48656719:1
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reference: sequence
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SIO_000300: 1
SIO_000628: feature:48656719-48656918:1:region

assembly_gap
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RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:48953046-48953245:1:region
SIO_000974: 43be7ae8-20e5-42a0-8651-fbb2ba940915

position:48953046:1
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reference: sequence
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SIO_000300: 1
SIO_000628: feature:48953046-48953245:1:region

assembly_gap
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RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:50780258-50780457:1:region
SIO_000974: 9bbb87d4-b16c-4818-a2f1-f9477019c27c

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reference: sequence
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SIO_000300: 1
SIO_000628: feature:50780258-50780457:1:region

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RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:50840225-50840424:1:region
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reference: sequence
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reference: sequence
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SIO_000300: 1
SIO_000628: feature:50840225-50840424:1:region

assembly_gap
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RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:51686625-51686824:1:region
SIO_000974: 2005702a-1974-4b6d-a8e0-a6b12d4e4d53

position:51686625:1
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reference: sequence
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position:51686824:1
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reference: sequence
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SIO_000300: 1
SIO_000628: feature:51686625-51686824:1:region

assembly_gap
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RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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location: region:51860621-51860820:1
BFO_0000051: feature:51860621-51860820:1:region
SIO_000974: e3d0c04e-e7c2-472e-b63f-18bd190afb02

position:51860621:1
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reference: sequence
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reference: sequence
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SIO_000300: 1
SIO_000628: feature:51860621-51860820:1:region

assembly_gap
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subclass of: SO_0000730
RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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location: region:52208074-52208273:1
BFO_0000051: feature:52208074-52208273:1:region
SIO_000974: fc840153-b9bb-4b70-9fe0-2c644edaad73

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position:52208273:1
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reference: sequence
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SIO_000300: 1
SIO_000628: feature:52208074-52208273:1:region

assembly_gap
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subclass of: SO_0000730
RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:52369975-52370174:1:region
SIO_000974: 09e13ee0-e57a-4d62-ba1f-2f10dec473fd

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reference: sequence
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SIO_000300: 1
SIO_000628: feature:52369975-52370174:1:region

assembly_gap
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subclass of: SO_0000730
RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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location: region:52410410-52410609:1
BFO_0000051: feature:52410410-52410609:1:region
SIO_000974: ca849b67-161f-4fcb-9557-1b4d915182af

position:52410410:1
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reference: sequence
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SIO_000300: 1
SIO_000628: feature:52410410-52410609:1:region

assembly_gap
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subclass of: SO_0000730
RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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location: region:52734141-52734340:1
BFO_0000051: feature:52734141-52734340:1:region
SIO_000974: f5b9f6e0-d723-40ea-88aa-0bca233ec7eb

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reference: sequence
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reference: sequence
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SIO_000300: 1
SIO_000628: feature:52734141-52734340:1:region

assembly_gap
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subclass of: SO_0000730
RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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location: region:53675090-53675289:1
BFO_0000051: feature:53675090-53675289:1:region
SIO_000974: bc09c0df-867b-423b-aa8b-6bccb770d55a

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reference: sequence
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reference: sequence
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SIO_000300: 1
SIO_000628: feature:53675090-53675289:1:region

assembly_gap
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subclass of: SO_0000730
RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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location: region:53891047-53891246:1
BFO_0000051: feature:53891047-53891246:1:region
SIO_000974: 92d2a40d-a444-4202-9386-54062e9ad3eb

position:53891047:1
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reference: sequence
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reference: sequence
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SIO_000300: 1
SIO_000628: feature:53891047-53891246:1:region

assembly_gap
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subclass of: SO_0000730
RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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location: region:53976975-53977174:1
BFO_0000051: feature:53976975-53977174:1:region
SIO_000974: dbceaa7f-8a95-4249-93c1-c99e31781a72

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reference: sequence
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reference: sequence
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SIO_000300: 1
SIO_000628: feature:53976975-53977174:1:region

assembly_gap
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subclass of: SO_0000730
RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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location: region:54139012-54139211:1
BFO_0000051: feature:54139012-54139211:1:region
SIO_000974: ec7a5171-2323-4c35-a8ff-c3f18bb70dc1

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reference: sequence
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reference: sequence
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SIO_000300: 1
SIO_000628: feature:54139012-54139211:1:region

assembly_gap
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subclass of: SO_0000730
RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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location: region:54174168-54174367:1
BFO_0000051: feature:54174168-54174367:1:region
SIO_000974: 2bea6412-b31a-4764-92c1-d8747f39e54e

position:54174168:1
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reference: sequence
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reference: sequence
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SIO_000300: 1
SIO_000628: feature:54174168-54174367:1:region

assembly_gap
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subclass of: SO_0000730
RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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location: region:54317505-54317704:1
BFO_0000051: feature:54317505-54317704:1:region
SIO_000974: 4f76481f-f1a0-445f-8808-81b3407fb525

position:54317505:1
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reference: sequence
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reference: sequence
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SIO_000300: 1
SIO_000628: feature:54317505-54317704:1:region

assembly_gap
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subclass of: SO_0000730
RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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location: region:54592696-54592895:1
BFO_0000051: feature:54592696-54592895:1:region
SIO_000974: 1474b6c0-1f19-424e-9130-2fd75c24a079

position:54592696:1
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reference: sequence
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reference: sequence
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SIO_000300: 1
SIO_000628: feature:54592696-54592895:1:region

assembly_gap
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subclass of: SO_0000730
RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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location: region:54786563-54786762:1
BFO_0000051: feature:54786563-54786762:1:region
SIO_000974: f6e58ad6-bc47-49ab-aa0a-2eaff87e0bdd

position:54786563:1
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reference: sequence
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position: 54786762
reference: sequence
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SIO_000300: 1
SIO_000628: feature:54786563-54786762:1:region

assembly_gap
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subclass of: SO_0000730
RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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location: region:55603532-55603731:1
BFO_0000051: feature:55603532-55603731:1:region
SIO_000974: 137b5bce-24ba-454f-a87e-48d55dab49d2

position:55603532:1
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reference: sequence
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position:55603731:1
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reference: sequence
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SIO_000300: 1
SIO_000628: feature:55603532-55603731:1:region

assembly_gap
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subclass of: SO_0000730
RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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location: region:55630732-55630931:1
BFO_0000051: feature:55630732-55630931:1:region
SIO_000974: b8d0f0a3-8e45-4b3a-8168-c1f296f97d1b

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reference: sequence
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reference: sequence
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SIO_000300: 1
SIO_000628: feature:55630732-55630931:1:region

assembly_gap
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subclass of: SO_0000730
RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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location: region:55948060-55948259:1
BFO_0000051: feature:55948060-55948259:1:region
SIO_000974: 04fe4f98-33c3-45aa-a4af-4ab2ee7ebb70

position:55948060:1
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reference: sequence
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reference: sequence
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SIO_000300: 1
SIO_000628: feature:55948060-55948259:1:region

assembly_gap
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subclass of: SO_0000730
RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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location: region:56084683-56084882:1
BFO_0000051: feature:56084683-56084882:1:region
SIO_000974: 8474f36a-f2e5-41fa-a911-8f88e622131f

position:56084683:1
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reference: sequence
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reference: sequence
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8474f36a-f2e5-41fa-a911-8f88e622131f
SIO_000300: 1
SIO_000628: feature:56084683-56084882:1:region

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subclass of: SO_0000730
RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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location: region:56141049-56141248:1
BFO_0000051: feature:56141049-56141248:1:region
SIO_000974: 6ae0092a-6480-4e63-aa63-71a97df6ef65

position:56141049:1
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reference: sequence
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SIO_000300: 1
SIO_000628: feature:56141049-56141248:1:region

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subclass of: SO_0000730
RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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location: region:56844939-56845138:1
BFO_0000051: feature:56844939-56845138:1:region
SIO_000974: f46b4ca1-9950-485a-8c6d-dd183ba15a01

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reference: sequence
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reference: sequence
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SIO_000300: 1
SIO_000628: feature:56844939-56845138:1:region

assembly_gap
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subclass of: SO_0000730
RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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location: region:56877026-56877225:1
BFO_0000051: feature:56877026-56877225:1:region
SIO_000974: cf100f9f-c6a1-4007-be73-b74b06853a56

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reference: sequence
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SIO_000300: 1
SIO_000628: feature:56877026-56877225:1:region

assembly_gap
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subclass of: SO_0000730
RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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location: region:57218147-57218346:1
BFO_0000051: feature:57218147-57218346:1:region
SIO_000974: 7e722771-9ef4-4ccb-89dc-9c35318f7474

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reference: sequence
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SIO_000300: 1
SIO_000628: feature:57218147-57218346:1:region

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subclass of: SO_0000730
RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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location: region:57828275-57828474:1
BFO_0000051: feature:57828275-57828474:1:region
SIO_000974: 7b5d950b-0906-45ea-a3b0-818499482d38

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reference: sequence
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SIO_000300: 1
SIO_000628: feature:57828275-57828474:1:region

assembly_gap
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subclass of: SO_0000730
RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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location: region:57961489-57961688:1
BFO_0000051: feature:57961489-57961688:1:region
SIO_000974: 45acf12f-0ca4-42a6-af24-5e8894e2eaf5

position:57961489:1
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reference: sequence
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reference: sequence
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SIO_000300: 1
SIO_000628: feature:57961489-57961688:1:region

assembly_gap
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subclass of: SO_0000730
RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:58042497-58042696:1:region
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SIO_000300: 1
SIO_000628: feature:58042497-58042696:1:region

assembly_gap
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subclass of: SO_0000730
RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:58186624-58186823:1:region
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SIO_000300: 1
SIO_000628: feature:58186624-58186823:1:region

assembly_gap
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RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:58231686-58231885:1:region
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SIO_000628: feature:58231686-58231885:1:region

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RO_0002162: 143735
estimated length: 200
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BFO_0000050: sequence
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BFO_0000051: feature:58312961-58313160:1:region
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SIO_000300: 1
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RO_0002162: 143735
estimated length: 200
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BFO_0000050: sequence
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SIO_000300: 1
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RO_0002162: 143735
estimated length: 200
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BFO_0000050: sequence
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BFO_0000051: feature:58470431-58470630:1:region
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SIO_000300: 1
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RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:58543133-58543332:1:region
SIO_000974: 4047f7dc-7322-45a1-bd68-d3065cd41301

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SIO_000628: feature:58543133-58543332:1:region

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RO_0002162: 143735
estimated length: 200
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BFO_0000050: sequence
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BFO_0000051: feature:58972236-58972435:1:region
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SIO_000300: 1
SIO_000628: feature:58972236-58972435:1:region

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RO_0002162: 143735
estimated length: 200
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BFO_0000050: sequence
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BFO_0000051: feature:59314689-59314888:1:region
SIO_000974: ae80f483-18ed-460a-98c4-1ed0225216d7

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SIO_000300: 1
SIO_000628: feature:59314689-59314888:1:region

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RO_0002162: 143735
estimated length: 200
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BFO_0000050: sequence
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BFO_0000051: feature:60295897-60296096:1:region
SIO_000974: e1f0b3a4-b775-4c9e-8d36-b74f6e3564e3

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SIO_000300: 1
SIO_000628: feature:60295897-60296096:1:region

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RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:61208121-61208320:1:region
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SIO_000300: 1
SIO_000628: feature:61208121-61208320:1:region

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RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:61367565-61367764:1:region
SIO_000974: e7925a40-58b0-4a8d-8ac4-b14266260ab5

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SIO_000300: 1
SIO_000628: feature:61367565-61367764:1:region

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RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:61488235-61488434:1:region
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reference: sequence
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SIO_000300: 1
SIO_000628: feature:61488235-61488434:1:region

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RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:61655538-61655737:1:region
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SIO_000300: 1
SIO_000628: feature:61655538-61655737:1:region

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RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:61845232-61845431:1:region
SIO_000974: 493527fd-9846-45bd-a745-50e1b7e55940

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reference: sequence
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SIO_000300: 1
SIO_000628: feature:61845232-61845431:1:region

assembly_gap
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subclass of: SO_0000730
RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:62044213-62044412:1:region
SIO_000974: 23a435d7-064f-4882-b994-16bd40de90d9

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reference: sequence
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SIO_000300: 1
SIO_000628: feature:62044213-62044412:1:region

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RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:62518777-62518976:1:region
SIO_000974: e59340b4-f7ac-49b3-b587-9b87274d1771

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reference: sequence
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SIO_000300: 1
SIO_000628: feature:62518777-62518976:1:region

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subclass of: SO_0000730
RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:62628976-62629175:1:region
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SIO_000300: 1
SIO_000628: feature:62628976-62629175:1:region

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subclass of: SO_0000730
RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:62658364-62658563:1:region
SIO_000974: 2f9319fb-42bd-4f12-96c0-07711307e985

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SIO_000300: 1
SIO_000628: feature:62658364-62658563:1:region

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RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:62708273-62708472:1:region
SIO_000974: 684f6311-af8f-4a1a-be4b-25f68d17de5b

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SIO_000300: 1
SIO_000628: feature:62708273-62708472:1:region

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RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:62741730-62741929:1:region
SIO_000974: d1a36258-b52f-42af-8361-a80015a8c88d

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reference: sequence
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SIO_000300: 1
SIO_000628: feature:62741730-62741929:1:region

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RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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location: region:62866186-62866385:1
BFO_0000051: feature:62866186-62866385:1:region
SIO_000974: d9a2010e-d4f0-4d83-9229-d18c0344fb10

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reference: sequence
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SIO_000300: 1
SIO_000628: feature:62866186-62866385:1:region

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RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:63057234-63057433:1:region
SIO_000974: 4141e627-6970-437f-bab2-0376426ef823

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SIO_000300: 1
SIO_000628: feature:63057234-63057433:1:region

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RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:63121337-63121536:1:region
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SIO_000300: 1
SIO_000628: feature:63121337-63121536:1:region

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RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:63400346-63400545:1:region
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SIO_000300: 1
SIO_000628: feature:63400346-63400545:1:region

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RO_0002162: 143735
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gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:63772212-63772411:1:region
SIO_000974: 06fc3650-a3d6-42c4-9a85-f452685a915e

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SIO_000300: 1
SIO_000628: feature:63772212-63772411:1:region

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RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:63970522-63970721:1:region
SIO_000974: ecbcb552-e9b5-4b11-80d5-de68c3408fa5

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SIO_000300: 1
SIO_000628: feature:63970522-63970721:1:region

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RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:64145337-64145536:1:region
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SIO_000300: 1
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RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:64366215-64366414:1:region
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SIO_000300: 1
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RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:64676794-64676993:1:region
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SIO_000300: 1
SIO_000628: feature:64676794-64676993:1:region

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RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:64893122-64893321:1:region
SIO_000974: db700de5-f14a-409e-bfa6-75f4cc236adc

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SIO_000300: 1
SIO_000628: feature:64893122-64893321:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 65049779..65049978
location: region:65049779-65049978:1
BFO_0000051: feature:65049779-65049978:1:region
SIO_000974: 2882a02d-5c09-4f13-b08d-c3a329be7057

position:65049779:1
position: 65049779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:65049978:1
position: 65049978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

2882a02d-5c09-4f13-b08d-c3a329be7057
SIO_000300: 1
SIO_000628: feature:65049779-65049978:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 66120804..66121003
location: region:66120804-66121003:1
BFO_0000051: feature:66120804-66121003:1:region
SIO_000974: 97f4efef-e762-4370-a7e9-6247377b73ce

position:66120804:1
position: 66120804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:66121003:1
position: 66121003
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

97f4efef-e762-4370-a7e9-6247377b73ce
SIO_000300: 1
SIO_000628: feature:66120804-66121003:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 66198445..66198644
location: region:66198445-66198644:1
BFO_0000051: feature:66198445-66198644:1:region
SIO_000974: 8ff432d8-3e52-4796-a3a1-8136cd62bd45

position:66198445:1
position: 66198445
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:66198644:1
position: 66198644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

8ff432d8-3e52-4796-a3a1-8136cd62bd45
SIO_000300: 1
SIO_000628: feature:66198445-66198644:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 67008426..67008625
location: region:67008426-67008625:1
BFO_0000051: feature:67008426-67008625:1:region
SIO_000974: 366842cf-bc00-4b30-a806-a23a9873531c

position:67008426:1
position: 67008426
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:67008625:1
position: 67008625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

366842cf-bc00-4b30-a806-a23a9873531c
SIO_000300: 1
SIO_000628: feature:67008426-67008625:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 67496549..67496748
location: region:67496549-67496748:1
BFO_0000051: feature:67496549-67496748:1:region
SIO_000974: a9b8ba71-07cf-4fcb-96ba-92b83fc55a25

position:67496549:1
position: 67496549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:67496748:1
position: 67496748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

a9b8ba71-07cf-4fcb-96ba-92b83fc55a25
SIO_000300: 1
SIO_000628: feature:67496549-67496748:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 67660155..67660354
location: region:67660155-67660354:1
BFO_0000051: feature:67660155-67660354:1:region
SIO_000974: 6c044769-7860-4e95-95dd-5d3aad4def89

position:67660155:1
position: 67660155
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:67660354:1
position: 67660354
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

6c044769-7860-4e95-95dd-5d3aad4def89
SIO_000300: 1
SIO_000628: feature:67660155-67660354:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 67740114..67740313
location: region:67740114-67740313:1
BFO_0000051: feature:67740114-67740313:1:region
SIO_000974: 7ae02d2d-d5ed-47ce-a6cb-f67c6da0c1ef

position:67740114:1
position: 67740114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:67740313:1
position: 67740313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

7ae02d2d-d5ed-47ce-a6cb-f67c6da0c1ef
SIO_000300: 1
SIO_000628: feature:67740114-67740313:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 67758061..67758260
location: region:67758061-67758260:1
BFO_0000051: feature:67758061-67758260:1:region
SIO_000974: 2e7a5600-5a55-435a-bb9a-5270b2e49dd9

position:67758061:1
position: 67758061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:67758260:1
position: 67758260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

2e7a5600-5a55-435a-bb9a-5270b2e49dd9
SIO_000300: 1
SIO_000628: feature:67758061-67758260:1:region

Leuctra nigra genome assembly, chromosome: 2.
type: Entry
definition: Leuctra nigra genome assembly, chromosome: 2.
sequence version: OW203762.1
sequence date: 2022-03-26
sequence: sequence
division: INV
source: Leuctra nigra
organism: Leuctra nigra
taxonomy: Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Polyneoptera; Plecoptera; Nemouroidea; Leuctridae; Leuctrinae; Leuctra.
reference: 1
comment: The assembly ipLeuNigr2.1 is based on 32x PacBio data and Arima2\nHi-C data\ngenerated by the Darwin Tree of Life Project\n(https://www.darwintreeoflife.org/). The assembly process included\nthe\nfollowing sequence of steps: initial PacBio assembly generation\nwith\nHifiasm, retained haplotig separation with purge_dups, and Hi-C\nbased\nscaffolding with YaHS. The mitochondrial genome was assembled using\nMitoHifi. Finally, the assembly was analysed and manually improved\nusing\nrapid curation. Chromosome-scale scaffolds confirmed by the Hi-C\ndata have\nbeen named in order of size. chromosome X found at half coverage.\nNo Y\nchromosome found.

sequence
subclass of: SO_0000001
sequence length: 57020912
topology: linear
RO_0000086: SO_0000987
location: 1..57020912
location: region:1-57020912:1
RO_0002162: 143735

1
journal: Submitted (19-MAR-2022) to the INSDC. WELLCOME SANGER INSTITUTE, Tree of Life, Wellcome Genome Campus, Hinxton CB10 1SA, United Kingdom

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:57020912:1
position: 57020912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-57020912:1:source
BFO_0000050: sequence
organism: Leuctra nigra
chromosome: 2
mol type: genomic DNA

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 542093..542292
location: region:542093-542292:1
BFO_0000051: feature:542093-542292:1:region
SIO_000974: 31ec4a32-3b4a-4540-adc3-72fd6208d399

position:542093:1
position: 542093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:542292:1
position: 542292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

31ec4a32-3b4a-4540-adc3-72fd6208d399
SIO_000300: 1
SIO_000628: feature:542093-542292:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 895374..895573
location: region:895374-895573:1
BFO_0000051: feature:895374-895573:1:region
SIO_000974: ad8e0667-7731-4888-83d9-d665918b556d

position:895374:1
position: 895374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:895573:1
position: 895573
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ad8e0667-7731-4888-83d9-d665918b556d
SIO_000300: 1
SIO_000628: feature:895374-895573:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 1221085..1221284
location: region:1221085-1221284:1
BFO_0000051: feature:1221085-1221284:1:region
SIO_000974: e60ca45f-12a1-401b-ac06-47bc662b4e20

position:1221085:1
position: 1221085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1221284:1
position: 1221284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

e60ca45f-12a1-401b-ac06-47bc662b4e20
SIO_000300: 1
SIO_000628: feature:1221085-1221284:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 1329028..1329227
location: region:1329028-1329227:1
BFO_0000051: feature:1329028-1329227:1:region
SIO_000974: 929b3e16-4c48-4feb-8413-a2ab68b913f5

position:1329028:1
position: 1329028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1329227:1
position: 1329227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

929b3e16-4c48-4feb-8413-a2ab68b913f5
SIO_000300: 1
SIO_000628: feature:1329028-1329227:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 1518919..1519118
location: region:1518919-1519118:1
BFO_0000051: feature:1518919-1519118:1:region
SIO_000974: 8ba5979a-c7bd-48c6-a40e-126727a992df

position:1518919:1
position: 1518919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1519118:1
position: 1519118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

8ba5979a-c7bd-48c6-a40e-126727a992df
SIO_000300: 1
SIO_000628: feature:1518919-1519118:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 1629610..1629809
location: region:1629610-1629809:1
BFO_0000051: feature:1629610-1629809:1:region
SIO_000974: 28cb024d-d605-4850-9ff7-e40a7ad89b4c

position:1629610:1
position: 1629610
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1629809:1
position: 1629809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

28cb024d-d605-4850-9ff7-e40a7ad89b4c
SIO_000300: 1
SIO_000628: feature:1629610-1629809:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 1734355..1734554
location: region:1734355-1734554:1
BFO_0000051: feature:1734355-1734554:1:region
SIO_000974: 2b88b20b-aa8a-4a0d-a17d-33ad2d3a214a

position:1734355:1
position: 1734355
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1734554:1
position: 1734554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

2b88b20b-aa8a-4a0d-a17d-33ad2d3a214a
SIO_000300: 1
SIO_000628: feature:1734355-1734554:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 1882977..1883176
location: region:1882977-1883176:1
BFO_0000051: feature:1882977-1883176:1:region
SIO_000974: 89fb4662-176f-40a4-92d5-2e1a63385bc4

position:1882977:1
position: 1882977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1883176:1
position: 1883176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

89fb4662-176f-40a4-92d5-2e1a63385bc4
SIO_000300: 1
SIO_000628: feature:1882977-1883176:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 1924629..1924828
location: region:1924629-1924828:1
BFO_0000051: feature:1924629-1924828:1:region
SIO_000974: 501af3f4-cb07-47dc-816c-0040a624f8a1

position:1924629:1
position: 1924629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1924828:1
position: 1924828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

501af3f4-cb07-47dc-816c-0040a624f8a1
SIO_000300: 1
SIO_000628: feature:1924629-1924828:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 2279337..2279536
location: region:2279337-2279536:1
BFO_0000051: feature:2279337-2279536:1:region
SIO_000974: 096db119-67c8-4bd6-8c64-21dbcb86b703

position:2279337:1
position: 2279337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2279536:1
position: 2279536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

096db119-67c8-4bd6-8c64-21dbcb86b703
SIO_000300: 1
SIO_000628: feature:2279337-2279536:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 2870996..2871195
location: region:2870996-2871195:1
BFO_0000051: feature:2870996-2871195:1:region
SIO_000974: 8b776ee1-c07a-4d33-bb2f-fc9ef68c6509

position:2870996:1
position: 2870996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2871195:1
position: 2871195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

8b776ee1-c07a-4d33-bb2f-fc9ef68c6509
SIO_000300: 1
SIO_000628: feature:2870996-2871195:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 4110196..4110395
location: region:4110196-4110395:1
BFO_0000051: feature:4110196-4110395:1:region
SIO_000974: d5b19803-723b-426b-a0f4-86a6c70f22da

position:4110196:1
position: 4110196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4110395:1
position: 4110395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

d5b19803-723b-426b-a0f4-86a6c70f22da
SIO_000300: 1
SIO_000628: feature:4110196-4110395:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 4298390..4298589
location: region:4298390-4298589:1
BFO_0000051: feature:4298390-4298589:1:region
SIO_000974: 421d0692-5a3b-46fb-9b99-7946d607aa74

position:4298390:1
position: 4298390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4298589:1
position: 4298589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

421d0692-5a3b-46fb-9b99-7946d607aa74
SIO_000300: 1
SIO_000628: feature:4298390-4298589:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 4656429..4656628
location: region:4656429-4656628:1
BFO_0000051: feature:4656429-4656628:1:region
SIO_000974: 31525d38-5fcc-42c5-a40f-9a6c0d989dc1

position:4656429:1
position: 4656429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4656628:1
position: 4656628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

31525d38-5fcc-42c5-a40f-9a6c0d989dc1
SIO_000300: 1
SIO_000628: feature:4656429-4656628:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 5001013..5001212
location: region:5001013-5001212:1
BFO_0000051: feature:5001013-5001212:1:region
SIO_000974: 40c62d0f-c6ce-4af1-b4d2-0ae3d7dd00df

position:5001013:1
position: 5001013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5001212:1
position: 5001212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

40c62d0f-c6ce-4af1-b4d2-0ae3d7dd00df
SIO_000300: 1
SIO_000628: feature:5001013-5001212:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 5514267..5514466
location: region:5514267-5514466:1
BFO_0000051: feature:5514267-5514466:1:region
SIO_000974: da257793-5c22-4bc2-b045-90038d896974

position:5514267:1
position: 5514267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5514466:1
position: 5514466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

da257793-5c22-4bc2-b045-90038d896974
SIO_000300: 1
SIO_000628: feature:5514267-5514466:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 5537201..5537400
location: region:5537201-5537400:1
BFO_0000051: feature:5537201-5537400:1:region
SIO_000974: 47e0a015-250c-4054-b2f6-7e7122a1365c

position:5537201:1
position: 5537201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5537400:1
position: 5537400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

47e0a015-250c-4054-b2f6-7e7122a1365c
SIO_000300: 1
SIO_000628: feature:5537201-5537400:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 5724226..5724425
location: region:5724226-5724425:1
BFO_0000051: feature:5724226-5724425:1:region
SIO_000974: 49007286-da96-427b-a636-f79fcdc0315e

position:5724226:1
position: 5724226
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5724425:1
position: 5724425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

49007286-da96-427b-a636-f79fcdc0315e
SIO_000300: 1
SIO_000628: feature:5724226-5724425:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 5817426..5817625
location: region:5817426-5817625:1
BFO_0000051: feature:5817426-5817625:1:region
SIO_000974: 458478f2-1ccf-4b52-ada3-2a3499290046

position:5817426:1
position: 5817426
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5817625:1
position: 5817625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

458478f2-1ccf-4b52-ada3-2a3499290046
SIO_000300: 1
SIO_000628: feature:5817426-5817625:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 6332372..6332571
location: region:6332372-6332571:1
BFO_0000051: feature:6332372-6332571:1:region
SIO_000974: 053e2cc0-cc03-45e5-a2a6-11f8bc312c32

position:6332372:1
position: 6332372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6332571:1
position: 6332571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

053e2cc0-cc03-45e5-a2a6-11f8bc312c32
SIO_000300: 1
SIO_000628: feature:6332372-6332571:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 7094707..7094906
location: region:7094707-7094906:1
BFO_0000051: feature:7094707-7094906:1:region
SIO_000974: 5c7d2ed9-a136-411f-b617-6ec84d016dc8

position:7094707:1
position: 7094707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7094906:1
position: 7094906
reference: sequence
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SIO_000300: 1
SIO_000628: feature:7094707-7094906:1:region

assembly_gap
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subclass of: SO_0000730
RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:7637102-7637301:1:region
SIO_000974: c742ad78-df9d-4da5-bb14-da16fc02b426

position:7637102:1
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reference: sequence
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reference: sequence
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SIO_000300: 1
SIO_000628: feature:7637102-7637301:1:region

assembly_gap
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RO_0002162: 143735
estimated length: 200
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BFO_0000050: sequence
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BFO_0000051: feature:7750893-7751092:1:region
SIO_000974: 89f4a8a3-01a3-4d6d-bc21-0290c50a2874

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reference: sequence
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SIO_000300: 1
SIO_000628: feature:7750893-7751092:1:region

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RO_0002162: 143735
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BFO_0000050: sequence
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BFO_0000051: feature:7890123-7890322:1:region
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reference: sequence
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SIO_000300: 1
SIO_000628: feature:7890123-7890322:1:region

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RO_0002162: 143735
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gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:8298764-8298963:1:region
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SIO_000300: 1
SIO_000628: feature:8298764-8298963:1:region

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RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:8383913-8384112:1:region
SIO_000974: dba9fbd6-2ff2-400b-80bc-4e930b196f97

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reference: sequence
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SIO_000300: 1
SIO_000628: feature:8383913-8384112:1:region

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RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:8774809-8775008:1:region
SIO_000974: 52f22c88-4bd6-41be-9777-f99f1017f5ec

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reference: sequence
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SIO_000300: 1
SIO_000628: feature:8774809-8775008:1:region

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RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:9315595-9315794:1:region
SIO_000974: b6e7a724-6959-43af-bbce-914d26a131ec

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reference: sequence
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reference: sequence
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SIO_000300: 1
SIO_000628: feature:9315595-9315794:1:region

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RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:9593547-9593746:1:region
SIO_000974: 4f20b2fe-37e2-45dd-8a41-bd49e47029fb

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reference: sequence
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SIO_000300: 1
SIO_000628: feature:9593547-9593746:1:region

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RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:9646969-9647168:1:region
SIO_000974: 8fd44747-9e2c-487c-83a5-e928ce8316a3

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reference: sequence
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SIO_000300: 1
SIO_000628: feature:9646969-9647168:1:region

assembly_gap
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RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:9899447-9899646:1:region
SIO_000974: b14ed1a2-11fc-4206-97ed-2563995d2459

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reference: sequence
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SIO_000300: 1
SIO_000628: feature:9899447-9899646:1:region

assembly_gap
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RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:9986655-9986854:1:region
SIO_000974: 485b0f3e-84c4-4b2e-978a-04c0d5862309

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reference: sequence
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SIO_000300: 1
SIO_000628: feature:9986655-9986854:1:region

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RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:10191288-10191487:1:region
SIO_000974: 54126563-8bf8-4221-85be-9788b208445a

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reference: sequence
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SIO_000300: 1
SIO_000628: feature:10191288-10191487:1:region

assembly_gap
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RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:10457488-10457687:1:region
SIO_000974: aa945fb2-1bd6-41b5-b9dc-bea36398ec4d

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reference: sequence
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SIO_000300: 1
SIO_000628: feature:10457488-10457687:1:region

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RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:10812534-10812733:1:region
SIO_000974: 2f8713ab-813c-4636-b507-3bc0626b4533

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reference: sequence
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reference: sequence
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SIO_000300: 1
SIO_000628: feature:10812534-10812733:1:region

assembly_gap
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subclass of: SO_0000730
RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:11243203-11243402:1:region
SIO_000974: 556acc2a-4a50-43f0-b674-97b8d6330bf6

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reference: sequence
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reference: sequence
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SIO_000300: 1
SIO_000628: feature:11243203-11243402:1:region

assembly_gap
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subclass of: SO_0000730
RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:12061745-12061944:1:region
SIO_000974: f6dbfbd8-de6b-4a64-be88-d9d0af28d167

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reference: sequence
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SIO_000300: 1
SIO_000628: feature:12061745-12061944:1:region

assembly_gap
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subclass of: SO_0000730
RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:12943945-12944144:1:region
SIO_000974: 8d5a61c8-6481-4724-841d-e35d9f3b4e20

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reference: sequence
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reference: sequence
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SIO_000300: 1
SIO_000628: feature:12943945-12944144:1:region

assembly_gap
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subclass of: SO_0000730
RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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location: region:13013145-13013344:1
BFO_0000051: feature:13013145-13013344:1:region
SIO_000974: 6976d54b-3b40-4e8b-a668-25ce3e03c99e

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reference: sequence
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SIO_000300: 1
SIO_000628: feature:13013145-13013344:1:region

assembly_gap
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subclass of: SO_0000730
RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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location: region:13241698-13241897:1
BFO_0000051: feature:13241698-13241897:1:region
SIO_000974: 6cb9d8a5-1c0d-4eb1-a44f-9e2ef5eb0741

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reference: sequence
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reference: sequence
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SIO_000300: 1
SIO_000628: feature:13241698-13241897:1:region

assembly_gap
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RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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location: region:14905465-14905664:1
BFO_0000051: feature:14905465-14905664:1:region
SIO_000974: c8be817c-2b72-4c39-a3ea-83c8567f110e

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reference: sequence
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SIO_000300: 1
SIO_000628: feature:14905465-14905664:1:region

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RO_0002162: 143735
estimated length: 399
gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:14956086-14956484:1:region
SIO_000974: c06e47ac-d7d6-4703-a56b-fd6432bddc8e

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reference: sequence
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SIO_000300: 1
SIO_000628: feature:14956086-14956484:1:region

assembly_gap
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subclass of: SO_0000730
RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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location: region:15010128-15010327:1
BFO_0000051: feature:15010128-15010327:1:region
SIO_000974: 1485b5ad-ba95-4902-8209-9c8826f4426d

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reference: sequence
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reference: sequence
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SIO_000300: 1
SIO_000628: feature:15010128-15010327:1:region

assembly_gap
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RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:15106201-15106400:1:region
SIO_000974: b5751741-0554-4b07-bb2b-6dc627841e25

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reference: sequence
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SIO_000300: 1
SIO_000628: feature:15106201-15106400:1:region

assembly_gap
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RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:15195086-15195285:1:region
SIO_000974: dcdeb1a0-4946-4e9d-8732-2f78c9ecc5b1

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reference: sequence
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reference: sequence
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SIO_000300: 1
SIO_000628: feature:15195086-15195285:1:region

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RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:15354359-15354558:1:region
SIO_000974: bd739ede-583a-41d6-b994-44b42cd37867

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reference: sequence
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reference: sequence
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SIO_000300: 1
SIO_000628: feature:15354359-15354558:1:region

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subclass of: SO_0000730
RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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location: region:15601536-15601735:1
BFO_0000051: feature:15601536-15601735:1:region
SIO_000974: 4a30adee-c6d6-445d-9632-c1d1ea56ab78

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reference: sequence
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reference: sequence
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SIO_000300: 1
SIO_000628: feature:15601536-15601735:1:region

assembly_gap
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subclass of: SO_0000730
RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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location: region:15875871-15876070:1
BFO_0000051: feature:15875871-15876070:1:region
SIO_000974: 009cb4d6-f9da-4e74-a49b-0fa8a855c428

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reference: sequence
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SIO_000300: 1
SIO_000628: feature:15875871-15876070:1:region

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subclass of: SO_0000730
RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:16027166-16027365:1:region
SIO_000974: 13c664ed-1a95-40f4-8e3b-f802ac89e42b

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reference: sequence
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reference: sequence
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SIO_000300: 1
SIO_000628: feature:16027166-16027365:1:region

assembly_gap
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subclass of: SO_0000730
RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:16102096-16102295:1:region
SIO_000974: 9a5ff476-2221-4196-a239-3ff62adaf584

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reference: sequence
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SIO_000300: 1
SIO_000628: feature:16102096-16102295:1:region

assembly_gap
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subclass of: SO_0000730
RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:16288884-16289083:1:region
SIO_000974: 8f4e9db8-6d37-4177-9666-bd5738304f93

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reference: sequence
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reference: sequence
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SIO_000300: 1
SIO_000628: feature:16288884-16289083:1:region

assembly_gap
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subclass of: SO_0000730
RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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location: region:16388879-16389078:1
BFO_0000051: feature:16388879-16389078:1:region
SIO_000974: 6e96d585-c05f-464b-8a9b-58af385dd885

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position:16389078:1
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reference: sequence
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SIO_000300: 1
SIO_000628: feature:16388879-16389078:1:region

assembly_gap
type: Assembly Gap
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RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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location: region:16474198-16474397:1
BFO_0000051: feature:16474198-16474397:1:region
SIO_000974: 14c58ba6-a070-4de4-9e78-1766ea83d08a

position:16474198:1
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reference: sequence
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position:16474397:1
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reference: sequence
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14c58ba6-a070-4de4-9e78-1766ea83d08a
SIO_000300: 1
SIO_000628: feature:16474198-16474397:1:region

assembly_gap
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RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:16746878-16747077:1:region
SIO_000974: 70492d4d-1225-405b-a62b-cf45eae1dbbd

position:16746878:1
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reference: sequence
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position:16747077:1
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reference: sequence
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SIO_000300: 1
SIO_000628: feature:16746878-16747077:1:region

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RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:16795234-16795433:1:region
SIO_000974: 2479ed26-82d0-4052-b624-0c4d0423c2d5

position:16795234:1
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reference: sequence
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position:16795433:1
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reference: sequence
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SIO_000300: 1
SIO_000628: feature:16795234-16795433:1:region

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RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:17035274-17035473:1:region
SIO_000974: 82fa644a-1cdb-47e6-bbbc-4476e8c4b6cb

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reference: sequence
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reference: sequence
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SIO_000300: 1
SIO_000628: feature:17035274-17035473:1:region

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RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:17240677-17240876:1:region
SIO_000974: 75856d96-fb61-497f-bf9d-03d44dfd4d15

position:17240677:1
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position:17240876:1
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SIO_000300: 1
SIO_000628: feature:17240677-17240876:1:region

assembly_gap
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RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:17319285-17319484:1:region
SIO_000974: fad396a9-e236-40da-a851-5abd5efa81cf

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reference: sequence
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SIO_000300: 1
SIO_000628: feature:17319285-17319484:1:region

assembly_gap
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RO_0002162: 143735
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gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:18003396-18003595:1:region
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reference: sequence
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SIO_000300: 1
SIO_000628: feature:18003396-18003595:1:region

assembly_gap
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RO_0002162: 143735
estimated length: 200
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BFO_0000050: sequence
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BFO_0000051: feature:18219523-18219722:1:region
SIO_000974: d86e5d2b-1441-4fe9-a78b-1df58ef6ff59

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reference: sequence
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SIO_000300: 1
SIO_000628: feature:18219523-18219722:1:region

assembly_gap
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RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:18461598-18461797:1:region
SIO_000974: b46a6bbf-801f-484e-985e-4c0108a3b6fb

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position:18461797:1
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reference: sequence
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SIO_000300: 1
SIO_000628: feature:18461598-18461797:1:region

assembly_gap
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RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:18675480-18675679:1:region
SIO_000974: a23629d7-48be-4eb2-8e0e-88936b51d0c5

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position:18675679:1
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reference: sequence
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SIO_000300: 1
SIO_000628: feature:18675480-18675679:1:region

assembly_gap
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RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:19448151-19448350:1:region
SIO_000974: c09cb8cf-c93f-4a24-a3c6-41095100f0dc

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reference: sequence
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SIO_000300: 1
SIO_000628: feature:19448151-19448350:1:region

assembly_gap
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RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:19708590-19708789:1:region
SIO_000974: 128c9d2c-262b-49eb-955d-7f0bf500b362

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position:19708789:1
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reference: sequence
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SIO_000300: 1
SIO_000628: feature:19708590-19708789:1:region

assembly_gap
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subclass of: SO_0000730
RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:20049302-20049501:1:region
SIO_000974: ad0afd83-f468-4809-a447-4b659b5f5d04

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reference: sequence
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SIO_000300: 1
SIO_000628: feature:20049302-20049501:1:region

assembly_gap
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subclass of: SO_0000730
RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:20651493-20651692:1:region
SIO_000974: a62d6883-ec5e-4950-8208-744b3afc1eb9

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reference: sequence
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SIO_000300: 1
SIO_000628: feature:20651493-20651692:1:region

assembly_gap
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RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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location: region:21154342-21154541:1
BFO_0000051: feature:21154342-21154541:1:region
SIO_000974: 219f9e0c-322c-4d02-88b9-a712566005ab

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reference: sequence
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reference: sequence
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SIO_000300: 1
SIO_000628: feature:21154342-21154541:1:region

assembly_gap
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subclass of: SO_0000730
RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:21604929-21605128:1:region
SIO_000974: e13fe68a-2e9a-4f4c-822e-e186bfeec1d1

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reference: sequence
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reference: sequence
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SIO_000300: 1
SIO_000628: feature:21604929-21605128:1:region

assembly_gap
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RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:21678536-21678735:1:region
SIO_000974: da122b62-e164-4565-9b4f-19b994dc4c3e

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reference: sequence
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reference: sequence
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SIO_000300: 1
SIO_000628: feature:21678536-21678735:1:region

assembly_gap
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RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:21705952-21706151:1:region
SIO_000974: 7b05ebdf-8b81-4201-894d-0db3d94e1194

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reference: sequence
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reference: sequence
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SIO_000300: 1
SIO_000628: feature:21705952-21706151:1:region

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RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:21882996-21883195:1:region
SIO_000974: a4090de3-a07f-42b5-ac2f-51d1f2f626f7

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reference: sequence
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reference: sequence
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SIO_000300: 1
SIO_000628: feature:21882996-21883195:1:region

assembly_gap
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RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:22140890-22141089:1:region
SIO_000974: 8b77848c-44a6-4f51-ba91-cd19936f29d7

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reference: sequence
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reference: sequence
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SIO_000300: 1
SIO_000628: feature:22140890-22141089:1:region

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RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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location: region:22434662-22434861:1
BFO_0000051: feature:22434662-22434861:1:region
SIO_000974: c61641fb-ba35-4e9c-80f1-053a7b4e9b50

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reference: sequence
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reference: sequence
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SIO_000300: 1
SIO_000628: feature:22434662-22434861:1:region

assembly_gap
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subclass of: SO_0000730
RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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location: region:23140432-23140631:1
BFO_0000051: feature:23140432-23140631:1:region
SIO_000974: 2987e237-6298-44fc-b1ce-ae51bd5b2a7c

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reference: sequence
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SIO_000300: 1
SIO_000628: feature:23140432-23140631:1:region

assembly_gap
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RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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location: region:23736725-23736924:1
BFO_0000051: feature:23736725-23736924:1:region
SIO_000974: feabf842-0ddb-4762-ad48-1f6367fdda8f

position:23736725:1
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reference: sequence
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reference: sequence
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SIO_000300: 1
SIO_000628: feature:23736725-23736924:1:region

assembly_gap
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subclass of: SO_0000730
RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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location: region:24913138-24913337:1
BFO_0000051: feature:24913138-24913337:1:region
SIO_000974: 4e8cfad4-c9d7-4636-8900-ceab18fc2e74

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reference: sequence
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SIO_000300: 1
SIO_000628: feature:24913138-24913337:1:region

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subclass of: SO_0000730
RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:25523868-25524067:1:region
SIO_000974: 6c1d1b67-6c19-477a-a13e-be0de406c9d8

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reference: sequence
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SIO_000300: 1
SIO_000628: feature:25523868-25524067:1:region

assembly_gap
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RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:25564804-25565003:1:region
SIO_000974: a1811b69-c25f-4e17-a572-30ea8b5e0951

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reference: sequence
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SIO_000300: 1
SIO_000628: feature:25564804-25565003:1:region

assembly_gap
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subclass of: SO_0000730
RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:26387736-26387935:1:region
SIO_000974: 051beb45-1b8a-4a32-9957-d06545a1c864

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reference: sequence
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SIO_000300: 1
SIO_000628: feature:26387736-26387935:1:region

assembly_gap
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subclass of: SO_0000730
RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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location: region:26485809-26486008:1
BFO_0000051: feature:26485809-26486008:1:region
SIO_000974: 6c3e6f6b-a42f-4adc-8ea8-de09b5859baa

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reference: sequence
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SIO_000300: 1
SIO_000628: feature:26485809-26486008:1:region

assembly_gap
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subclass of: SO_0000730
RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:27736340-27736539:1:region
SIO_000974: a73ba2cf-7577-400d-b933-c894cf9dc40b

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reference: sequence
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reference: sequence
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SIO_000300: 1
SIO_000628: feature:27736340-27736539:1:region

assembly_gap
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subclass of: SO_0000730
RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:28580297-28580496:1:region
SIO_000974: 34126494-2fbc-4f9e-8f2c-d1773937be73

position:28580297:1
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reference: sequence
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reference: sequence
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SIO_000300: 1
SIO_000628: feature:28580297-28580496:1:region

assembly_gap
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subclass of: SO_0000730
RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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location: region:28774040-28774239:1
BFO_0000051: feature:28774040-28774239:1:region
SIO_000974: 1172e294-361a-4b58-9763-eb5e0b191f8d

position:28774040:1
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reference: sequence
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SIO_000300: 1
SIO_000628: feature:28774040-28774239:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:29761109-29761308:1:region
SIO_000974: 6eca8e52-d86a-4e5e-9585-b7d7e2a67f9e

position:29761109:1
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reference: sequence
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SIO_000300: 1
SIO_000628: feature:29761109-29761308:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:30052033-30052232:1:region
SIO_000974: ec891fb8-b535-49ce-8c18-ac34f19c93f1

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reference: sequence
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SIO_000300: 1
SIO_000628: feature:30052033-30052232:1:region

assembly_gap
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RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:30557353-30557552:1:region
SIO_000974: 9fa5284f-bc40-4802-a981-917491d23e98

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SIO_000300: 1
SIO_000628: feature:30557353-30557552:1:region

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RO_0002162: 143735
estimated length: 200
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BFO_0000050: sequence
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BFO_0000051: feature:30905662-30905861:1:region
SIO_000974: ae97e54a-899b-4859-9ade-6daf32fe4785

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SIO_000300: 1
SIO_000628: feature:30905662-30905861:1:region

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RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:31927854-31928053:1:region
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SIO_000300: 1
SIO_000628: feature:31927854-31928053:1:region

assembly_gap
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RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:32097371-32097570:1:region
SIO_000974: 55620a52-dfeb-4b85-8700-2f69944a040b

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reference: sequence
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SIO_000300: 1
SIO_000628: feature:32097371-32097570:1:region

assembly_gap
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RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:32159207-32159406:1:region
SIO_000974: f5eef937-20d6-4019-a446-3904a276c564

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reference: sequence
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position:32159406:1
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reference: sequence
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SIO_000300: 1
SIO_000628: feature:32159207-32159406:1:region

assembly_gap
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RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:33279307-33279506:1:region
SIO_000974: f47c8a00-7bb7-4d09-bc3e-ad5d1a942048

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reference: sequence
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SIO_000300: 1
SIO_000628: feature:33279307-33279506:1:region

assembly_gap
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RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:33402916-33403115:1:region
SIO_000974: 595b3ac7-724d-419a-9e47-e89fc9a2b1d8

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SIO_000300: 1
SIO_000628: feature:33402916-33403115:1:region

assembly_gap
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RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:34107194-34107393:1:region
SIO_000974: 46540793-dcf7-48ab-b5e7-352dc8f12ce6

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reference: sequence
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SIO_000300: 1
SIO_000628: feature:34107194-34107393:1:region

assembly_gap
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RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:34163552-34163751:1:region
SIO_000974: 579ab599-45ad-46da-880a-e6d14f33fba6

position:34163552:1
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reference: sequence
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SIO_000300: 1
SIO_000628: feature:34163552-34163751:1:region

assembly_gap
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RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:34447010-34447209:1:region
SIO_000974: 151cd7aa-4f30-4cbb-bf26-2d6123eec5c2

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reference: sequence
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151cd7aa-4f30-4cbb-bf26-2d6123eec5c2
SIO_000300: 1
SIO_000628: feature:34447010-34447209:1:region

assembly_gap
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RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:34860083-34860282:1:region
SIO_000974: aea3b10a-ca36-487d-afab-5f007d2f8ddc

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reference: sequence
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SIO_000300: 1
SIO_000628: feature:34860083-34860282:1:region

assembly_gap
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RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:35165140-35165339:1:region
SIO_000974: ed8857a4-0dbe-41e6-84db-7228ff3b30e8

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reference: sequence
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SIO_000300: 1
SIO_000628: feature:35165140-35165339:1:region

assembly_gap
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RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:35667737-35667936:1:region
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reference: sequence
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SIO_000300: 1
SIO_000628: feature:35667737-35667936:1:region

assembly_gap
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RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:35901812-35902011:1:region
SIO_000974: a50e98fc-9d60-4b77-9f35-d1e7eef183c4

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reference: sequence
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SIO_000300: 1
SIO_000628: feature:35901812-35902011:1:region

assembly_gap
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subclass of: SO_0000730
RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:35999346-35999545:1:region
SIO_000974: 3bd528f3-c8c1-46bc-bf74-146261d456bf

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reference: sequence
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SIO_000300: 1
SIO_000628: feature:35999346-35999545:1:region

assembly_gap
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RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:36079916-36080115:1:region
SIO_000974: bc1b25cb-3b65-4a45-be1a-3bc594ad6fcf

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SIO_000300: 1
SIO_000628: feature:36079916-36080115:1:region

assembly_gap
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RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:36524782-36524981:1:region
SIO_000974: 287de493-30c8-48aa-820d-cdc174b15240

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reference: sequence
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SIO_000300: 1
SIO_000628: feature:36524782-36524981:1:region

assembly_gap
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RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:37001510-37001709:1:region
SIO_000974: 9f32e6dd-3977-4a9d-ad32-a3d5d5fff00a

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reference: sequence
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SIO_000300: 1
SIO_000628: feature:37001510-37001709:1:region

assembly_gap
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subclass of: SO_0000730
RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:37647009-37647208:1:region
SIO_000974: 79425bf5-63fb-4e46-9485-28e2d7dd8677

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reference: sequence
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reference: sequence
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SIO_000300: 1
SIO_000628: feature:37647009-37647208:1:region

assembly_gap
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subclass of: SO_0000730
RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:37955993-37956192:1:region
SIO_000974: 55e2670c-9bb3-4325-aa56-87eabd6ac977

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reference: sequence
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SIO_000300: 1
SIO_000628: feature:37955993-37956192:1:region

assembly_gap
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RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:38191097-38191296:1:region
SIO_000974: 91049356-62f7-4c0b-b31d-31db7f7b756a

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SIO_000300: 1
SIO_000628: feature:38191097-38191296:1:region

assembly_gap
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RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:38301010-38301209:1:region
SIO_000974: 7a4845d9-f847-4afa-8a6c-d44c41440d4c

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SIO_000300: 1
SIO_000628: feature:38301010-38301209:1:region

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RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:38355502-38355701:1:region
SIO_000974: 08a85629-cd07-4e04-a2c4-cd3deb3a5dde

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reference: sequence
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SIO_000300: 1
SIO_000628: feature:38355502-38355701:1:region

assembly_gap
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RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:38591702-38591901:1:region
SIO_000974: 7a5f5672-dbf1-47b9-b47b-96c5fef754d2

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SIO_000300: 1
SIO_000628: feature:38591702-38591901:1:region

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RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:38688999-38689198:1:region
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reference: sequence
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SIO_000300: 1
SIO_000628: feature:38688999-38689198:1:region

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RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:38752617-38752816:1:region
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SIO_000300: 1
SIO_000628: feature:38752617-38752816:1:region

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RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:38909676-38909875:1:region
SIO_000974: 5b632ee8-5eb1-4f08-8d93-e3a63a9d84ce

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SIO_000300: 1
SIO_000628: feature:38909676-38909875:1:region

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RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:39089484-39089683:1:region
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reference: sequence
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SIO_000300: 1
SIO_000628: feature:39089484-39089683:1:region

assembly_gap
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subclass of: SO_0000730
RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:39395004-39395203:1:region
SIO_000974: 98c28cfd-b7b1-4932-ade4-fd2541542dfb

position:39395004:1
position: 39395004
reference: sequence
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position:39395203:1
position: 39395203
reference: sequence
type: ForwardStrandPosition
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98c28cfd-b7b1-4932-ade4-fd2541542dfb
SIO_000300: 1
SIO_000628: feature:39395004-39395203:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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location: region:39675953-39676152:1
BFO_0000051: feature:39675953-39676152:1:region
SIO_000974: 3b997c52-b3c4-45ee-a2a0-3b137eca0b53

position:39675953:1
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reference: sequence
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position:39676152:1
position: 39676152
reference: sequence
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3b997c52-b3c4-45ee-a2a0-3b137eca0b53
SIO_000300: 1
SIO_000628: feature:39675953-39676152:1:region

assembly_gap
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subclass of: SO_0000730
RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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location: region:40463262-40463461:1
BFO_0000051: feature:40463262-40463461:1:region
SIO_000974: c44874ed-75f2-4636-8211-816514f67c9e

position:40463262:1
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reference: sequence
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position:40463461:1
position: 40463461
reference: sequence
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SIO_000300: 1
SIO_000628: feature:40463262-40463461:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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location: region:40921586-40921785:1
BFO_0000051: feature:40921586-40921785:1:region
SIO_000974: fb5d182d-8db8-4de1-ab52-f90cdb172f03

position:40921586:1
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reference: sequence
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position:40921785:1
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reference: sequence
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SIO_000300: 1
SIO_000628: feature:40921586-40921785:1:region

assembly_gap
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subclass of: SO_0000730
RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:41012128-41012327:1:region
SIO_000974: c1e947a4-3a98-496d-a8ed-77aa0085763f

position:41012128:1
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reference: sequence
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reference: sequence
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SIO_000300: 1
SIO_000628: feature:41012128-41012327:1:region

assembly_gap
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subclass of: SO_0000730
RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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location: region:41050065-41050264:1
BFO_0000051: feature:41050065-41050264:1:region
SIO_000974: 2b371360-d395-4406-8c49-52e9216095dd

position:41050065:1
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position:41050264:1
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reference: sequence
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2b371360-d395-4406-8c49-52e9216095dd
SIO_000300: 1
SIO_000628: feature:41050065-41050264:1:region

assembly_gap
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subclass of: SO_0000730
RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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location: region:41630613-41630812:1
BFO_0000051: feature:41630613-41630812:1:region
SIO_000974: e0909273-900f-45ad-8961-3c0f723a5299

position:41630613:1
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position:41630812:1
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reference: sequence
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SIO_000300: 1
SIO_000628: feature:41630613-41630812:1:region

assembly_gap
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subclass of: SO_0000730
RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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location: region:41847610-41847809:1
BFO_0000051: feature:41847610-41847809:1:region
SIO_000974: 0a2436a4-ae81-46a5-9ff6-9c1b1cf76cc5

position:41847610:1
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reference: sequence
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position:41847809:1
position: 41847809
reference: sequence
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0a2436a4-ae81-46a5-9ff6-9c1b1cf76cc5
SIO_000300: 1
SIO_000628: feature:41847610-41847809:1:region

assembly_gap
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subclass of: SO_0000730
RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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location: region:41874127-41874326:1
BFO_0000051: feature:41874127-41874326:1:region
SIO_000974: 07c8b368-dc82-407b-9178-a7bb019bf5ba

position:41874127:1
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reference: sequence
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position:41874326:1
position: 41874326
reference: sequence
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07c8b368-dc82-407b-9178-a7bb019bf5ba
SIO_000300: 1
SIO_000628: feature:41874127-41874326:1:region

assembly_gap
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subclass of: SO_0000730
RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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location: region:41913371-41913570:1
BFO_0000051: feature:41913371-41913570:1:region
SIO_000974: 2fbc60ff-dda8-4fe3-81b1-ac8013cc0402

position:41913371:1
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reference: sequence
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SIO_000300: 1
SIO_000628: feature:41913371-41913570:1:region

assembly_gap
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subclass of: SO_0000730
RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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location: region:41971325-41971524:1
BFO_0000051: feature:41971325-41971524:1:region
SIO_000974: 89b302c4-86fc-4dd9-946b-fe61eae0df74

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reference: sequence
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position:41971524:1
position: 41971524
reference: sequence
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SIO_000300: 1
SIO_000628: feature:41971325-41971524:1:region

assembly_gap
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subclass of: SO_0000730
RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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location: region:42086022-42086221:1
BFO_0000051: feature:42086022-42086221:1:region
SIO_000974: 558272b3-403b-48e4-b8a0-1ba682c5e7cf

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reference: sequence
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position:42086221:1
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reference: sequence
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SIO_000300: 1
SIO_000628: feature:42086022-42086221:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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location: region:42619211-42619410:1
BFO_0000051: feature:42619211-42619410:1:region
SIO_000974: d8e35494-13e6-4106-86aa-4ca08840217c

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reference: sequence
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SIO_000300: 1
SIO_000628: feature:42619211-42619410:1:region

assembly_gap
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subclass of: SO_0000730
RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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location: region:43086411-43086610:1
BFO_0000051: feature:43086411-43086610:1:region
SIO_000974: 3243dc01-db4a-4ea6-a2ac-fe679f00e056

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reference: sequence
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SIO_000300: 1
SIO_000628: feature:43086411-43086610:1:region

assembly_gap
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subclass of: SO_0000730
RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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location: region:44370055-44370254:1
BFO_0000051: feature:44370055-44370254:1:region
SIO_000974: e9e2206b-9fe9-46a6-9f61-f3333a79ef08

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reference: sequence
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reference: sequence
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SIO_000300: 1
SIO_000628: feature:44370055-44370254:1:region

assembly_gap
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subclass of: SO_0000730
RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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location: region:45150417-45150616:1
BFO_0000051: feature:45150417-45150616:1:region
SIO_000974: c0070227-cf31-497f-9254-2a4b105dd965

position:45150417:1
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reference: sequence
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position:45150616:1
position: 45150616
reference: sequence
type: ForwardStrandPosition
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SIO_000300: 1
SIO_000628: feature:45150417-45150616:1:region

assembly_gap
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subclass of: SO_0000730
RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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location: region:45296125-45296324:1
BFO_0000051: feature:45296125-45296324:1:region
SIO_000974: a049292c-cf88-4a86-a96d-5c980bab1049

position:45296125:1
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reference: sequence
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position:45296324:1
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reference: sequence
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SIO_000300: 1
SIO_000628: feature:45296125-45296324:1:region

assembly_gap
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subclass of: SO_0000730
RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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location: region:45519426-45519625:1
BFO_0000051: feature:45519426-45519625:1:region
SIO_000974: 5198ad9b-14fe-4698-8477-7fd7cb5b0bca

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reference: sequence
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reference: sequence
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SIO_000300: 1
SIO_000628: feature:45519426-45519625:1:region

assembly_gap
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subclass of: SO_0000730
RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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location: region:45950181-45950380:1
BFO_0000051: feature:45950181-45950380:1:region
SIO_000974: 8241a7a3-1159-48ef-94c2-b9f54570f844

position:45950181:1
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reference: sequence
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position:45950380:1
position: 45950380
reference: sequence
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SIO_000300: 1
SIO_000628: feature:45950181-45950380:1:region

assembly_gap
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subclass of: SO_0000730
RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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location: region:47666125-47666324:1
BFO_0000051: feature:47666125-47666324:1:region
SIO_000974: fc20382b-0403-4927-b778-0aefcb5de6e2

position:47666125:1
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reference: sequence
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position:47666324:1
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reference: sequence
type: ForwardStrandPosition
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SIO_000300: 1
SIO_000628: feature:47666125-47666324:1:region

assembly_gap
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subclass of: SO_0000730
RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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location: region:48242327-48242526:1
BFO_0000051: feature:48242327-48242526:1:region
SIO_000974: 84d48ab4-84a3-4dc0-8ec4-4234e08c6dad

position:48242327:1
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reference: sequence
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position:48242526:1
position: 48242526
reference: sequence
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84d48ab4-84a3-4dc0-8ec4-4234e08c6dad
SIO_000300: 1
SIO_000628: feature:48242327-48242526:1:region

assembly_gap
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subclass of: SO_0000730
RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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location: region:48282579-48282778:1
BFO_0000051: feature:48282579-48282778:1:region
SIO_000974: 91f2db44-6b2b-4500-bc31-f5515dddd1f2

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reference: sequence
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position:48282778:1
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reference: sequence
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SIO_000300: 1
SIO_000628: feature:48282579-48282778:1:region

assembly_gap
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subclass of: SO_0000730
RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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location: region:48430918-48431117:1
BFO_0000051: feature:48430918-48431117:1:region
SIO_000974: ff1a03be-d951-4e53-b006-e0abe3fd9dff

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reference: sequence
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SIO_000300: 1
SIO_000628: feature:48430918-48431117:1:region

assembly_gap
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subclass of: SO_0000730
RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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location: region:49237470-49237669:1
BFO_0000051: feature:49237470-49237669:1:region
SIO_000974: b90ed901-88ee-4577-97e1-0f0c128231da

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reference: sequence
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SIO_000300: 1
SIO_000628: feature:49237470-49237669:1:region

assembly_gap
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subclass of: SO_0000730
RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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location: region:49929778-49929977:1
BFO_0000051: feature:49929778-49929977:1:region
SIO_000974: fe83f826-b427-44de-b6fc-5ab28ad169ba

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reference: sequence
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reference: sequence
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SIO_000300: 1
SIO_000628: feature:49929778-49929977:1:region

assembly_gap
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subclass of: SO_0000730
RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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location: region:49970577-49970776:1
BFO_0000051: feature:49970577-49970776:1:region
SIO_000974: 97a86744-c37b-4805-b248-8d1dc326c7aa

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reference: sequence
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SIO_000300: 1
SIO_000628: feature:49970577-49970776:1:region

assembly_gap
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RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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location: region:50043834-50044033:1
BFO_0000051: feature:50043834-50044033:1:region
SIO_000974: b6d9f950-b4ae-4f15-b98a-5041f3aec165

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reference: sequence
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SIO_000300: 1
SIO_000628: feature:50043834-50044033:1:region

assembly_gap
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subclass of: SO_0000730
RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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location: region:50284696-50284895:1
BFO_0000051: feature:50284696-50284895:1:region
SIO_000974: 548b5798-e84b-41cb-8ffa-58d2aebc03b7

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reference: sequence
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SIO_000300: 1
SIO_000628: feature:50284696-50284895:1:region

assembly_gap
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subclass of: SO_0000730
RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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location: region:50856608-50856807:1
BFO_0000051: feature:50856608-50856807:1:region
SIO_000974: 9288fc62-cdf7-4b89-a70b-9d021a0c0469

position:50856608:1
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reference: sequence
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SIO_000300: 1
SIO_000628: feature:50856608-50856807:1:region

assembly_gap
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subclass of: SO_0000730
RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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location: region:50946742-50946941:1
BFO_0000051: feature:50946742-50946941:1:region
SIO_000974: 52b3baf0-4cd6-4c7f-970b-599f67881977

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reference: sequence
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reference: sequence
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SIO_000300: 1
SIO_000628: feature:50946742-50946941:1:region

assembly_gap
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subclass of: SO_0000730
RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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location: region:51191419-51191618:1
BFO_0000051: feature:51191419-51191618:1:region
SIO_000974: 7e2358db-9773-4f64-91d0-543aa23effc7

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reference: sequence
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SIO_000300: 1
SIO_000628: feature:51191419-51191618:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 51246522..51246721
location: region:51246522-51246721:1
BFO_0000051: feature:51246522-51246721:1:region
SIO_000974: 15bb307e-fbe9-4781-81b9-a242e86ffcaf

position:51246522:1
position: 51246522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:51246721:1
position: 51246721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

15bb307e-fbe9-4781-81b9-a242e86ffcaf
SIO_000300: 1
SIO_000628: feature:51246522-51246721:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 52270779..52270978
location: region:52270779-52270978:1
BFO_0000051: feature:52270779-52270978:1:region
SIO_000974: f0e2f95c-ba75-482d-8bff-9ac3d1cf3415

position:52270779:1
position: 52270779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:52270978:1
position: 52270978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

f0e2f95c-ba75-482d-8bff-9ac3d1cf3415
SIO_000300: 1
SIO_000628: feature:52270779-52270978:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 52492787..52492986
location: region:52492787-52492986:1
BFO_0000051: feature:52492787-52492986:1:region
SIO_000974: 185a125e-292d-4652-8ebf-0209d227e8c5

position:52492787:1
position: 52492787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:52492986:1
position: 52492986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

185a125e-292d-4652-8ebf-0209d227e8c5
SIO_000300: 1
SIO_000628: feature:52492787-52492986:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 52522518..52522717
location: region:52522518-52522717:1
BFO_0000051: feature:52522518-52522717:1:region
SIO_000974: 0af6afdf-fddb-4f41-ad3e-c3f14493383c

position:52522518:1
position: 52522518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:52522717:1
position: 52522717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

0af6afdf-fddb-4f41-ad3e-c3f14493383c
SIO_000300: 1
SIO_000628: feature:52522518-52522717:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 52694273..52694472
location: region:52694273-52694472:1
BFO_0000051: feature:52694273-52694472:1:region
SIO_000974: c477eb08-3f02-4fc4-b06e-9ec5f7d8cc53

position:52694273:1
position: 52694273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:52694472:1
position: 52694472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

c477eb08-3f02-4fc4-b06e-9ec5f7d8cc53
SIO_000300: 1
SIO_000628: feature:52694273-52694472:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 53152956..53153155
location: region:53152956-53153155:1
BFO_0000051: feature:53152956-53153155:1:region
SIO_000974: b6f9fd38-41b7-4721-b4d0-92158bce8b0b

position:53152956:1
position: 53152956
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:53153155:1
position: 53153155
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

b6f9fd38-41b7-4721-b4d0-92158bce8b0b
SIO_000300: 1
SIO_000628: feature:53152956-53153155:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 53232412..53232611
location: region:53232412-53232611:1
BFO_0000051: feature:53232412-53232611:1:region
SIO_000974: b084bb23-0d4b-42ef-8c5f-ccc61df9d03e

position:53232412:1
position: 53232412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:53232611:1
position: 53232611
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

b084bb23-0d4b-42ef-8c5f-ccc61df9d03e
SIO_000300: 1
SIO_000628: feature:53232412-53232611:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 53307522..53307721
location: region:53307522-53307721:1
BFO_0000051: feature:53307522-53307721:1:region
SIO_000974: fd6b4c7b-62e2-4d84-ab20-582e39fd949c

position:53307522:1
position: 53307522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:53307721:1
position: 53307721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

fd6b4c7b-62e2-4d84-ab20-582e39fd949c
SIO_000300: 1
SIO_000628: feature:53307522-53307721:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 53445341..53445540
location: region:53445341-53445540:1
BFO_0000051: feature:53445341-53445540:1:region
SIO_000974: 879d3909-14d1-480a-8083-51e8978c4723

position:53445341:1
position: 53445341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:53445540:1
position: 53445540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

879d3909-14d1-480a-8083-51e8978c4723
SIO_000300: 1
SIO_000628: feature:53445341-53445540:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 53644549..53644748
location: region:53644549-53644748:1
BFO_0000051: feature:53644549-53644748:1:region
SIO_000974: b2175cbb-6ac1-4ed2-8362-78be68e27cce

position:53644549:1
position: 53644549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:53644748:1
position: 53644748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

b2175cbb-6ac1-4ed2-8362-78be68e27cce
SIO_000300: 1
SIO_000628: feature:53644549-53644748:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 53791998..53792197
location: region:53791998-53792197:1
BFO_0000051: feature:53791998-53792197:1:region
SIO_000974: 34cafa13-c9f2-442e-a1e1-a27d14791157

position:53791998:1
position: 53791998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:53792197:1
position: 53792197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

34cafa13-c9f2-442e-a1e1-a27d14791157
SIO_000300: 1
SIO_000628: feature:53791998-53792197:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 53888491..53888690
location: region:53888491-53888690:1
BFO_0000051: feature:53888491-53888690:1:region
SIO_000974: f39d4f89-ddb4-450f-926f-af0afe602a4e

position:53888491:1
position: 53888491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:53888690:1
position: 53888690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

f39d4f89-ddb4-450f-926f-af0afe602a4e
SIO_000300: 1
SIO_000628: feature:53888491-53888690:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 54085519..54085718
location: region:54085519-54085718:1
BFO_0000051: feature:54085519-54085718:1:region
SIO_000974: a3097366-6b80-4417-a2be-c767121cc432

position:54085519:1
position: 54085519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:54085718:1
position: 54085718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

a3097366-6b80-4417-a2be-c767121cc432
SIO_000300: 1
SIO_000628: feature:54085519-54085718:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 55050116..55050315
location: region:55050116-55050315:1
BFO_0000051: feature:55050116-55050315:1:region
SIO_000974: 20ef6077-fc1b-4dbc-8ea9-27d08ae0ab7c

position:55050116:1
position: 55050116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:55050315:1
position: 55050315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

20ef6077-fc1b-4dbc-8ea9-27d08ae0ab7c
SIO_000300: 1
SIO_000628: feature:55050116-55050315:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 55558851..55559050
location: region:55558851-55559050:1
BFO_0000051: feature:55558851-55559050:1:region
SIO_000974: 5c561fb7-dc21-43bc-9302-f683e9ec9877

position:55558851:1
position: 55558851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:55559050:1
position: 55559050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

5c561fb7-dc21-43bc-9302-f683e9ec9877
SIO_000300: 1
SIO_000628: feature:55558851-55559050:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 56300787..56300986
location: region:56300787-56300986:1
BFO_0000051: feature:56300787-56300986:1:region
SIO_000974: 8d3b056b-0055-4e10-bc98-6d70b8e62a51

position:56300787:1
position: 56300787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:56300986:1
position: 56300986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

8d3b056b-0055-4e10-bc98-6d70b8e62a51
SIO_000300: 1
SIO_000628: feature:56300787-56300986:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 56825617..56825816
location: region:56825617-56825816:1
BFO_0000051: feature:56825617-56825816:1:region
SIO_000974: e21e70c4-d444-427d-a1a3-a70be8afe023

position:56825617:1
position: 56825617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:56825816:1
position: 56825816
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

e21e70c4-d444-427d-a1a3-a70be8afe023
SIO_000300: 1
SIO_000628: feature:56825617-56825816:1:region

Leuctra nigra genome assembly, chromosome: X.
type: Entry
definition: Leuctra nigra genome assembly, chromosome: X.
sequence version: OW203763.1
sequence date: 2022-03-26
sequence: sequence
division: INV
source: Leuctra nigra
organism: Leuctra nigra
taxonomy: Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Polyneoptera; Plecoptera; Nemouroidea; Leuctridae; Leuctrinae; Leuctra.
reference: 1
comment: The assembly ipLeuNigr2.1 is based on 32x PacBio data and Arima2\nHi-C data\ngenerated by the Darwin Tree of Life Project\n(https://www.darwintreeoflife.org/). The assembly process included\nthe\nfollowing sequence of steps: initial PacBio assembly generation\nwith\nHifiasm, retained haplotig separation with purge_dups, and Hi-C\nbased\nscaffolding with YaHS. The mitochondrial genome was assembled using\nMitoHifi. Finally, the assembly was analysed and manually improved\nusing\nrapid curation. Chromosome-scale scaffolds confirmed by the Hi-C\ndata have\nbeen named in order of size. chromosome X found at half coverage.\nNo Y\nchromosome found.

sequence
subclass of: SO_0000001
sequence length: 51711488
topology: linear
RO_0000086: SO_0000987
location: 1..51711488
location: region:1-51711488:1
RO_0002162: 143735

1
journal: Submitted (19-MAR-2022) to the INSDC. WELLCOME SANGER INSTITUTE, Tree of Life, Wellcome Genome Campus, Hinxton CB10 1SA, United Kingdom

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:51711488:1
position: 51711488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-51711488:1:source
BFO_0000050: sequence
organism: Leuctra nigra
chromosome: X
mol type: genomic DNA

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 179339..179538
location: region:179339-179538:1
BFO_0000051: feature:179339-179538:1:region
SIO_000974: 0fa8f758-93e8-4638-ad79-698f59a2d53b

position:179339:1
position: 179339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:179538:1
position: 179538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

0fa8f758-93e8-4638-ad79-698f59a2d53b
SIO_000300: 1
SIO_000628: feature:179339-179538:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 563539..563738
location: region:563539-563738:1
BFO_0000051: feature:563539-563738:1:region
SIO_000974: 19ec69a6-1f89-4be2-8a89-7d99b6e4a846

position:563539:1
position: 563539
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:563738:1
position: 563738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

19ec69a6-1f89-4be2-8a89-7d99b6e4a846
SIO_000300: 1
SIO_000628: feature:563539-563738:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 683997..684196
location: region:683997-684196:1
BFO_0000051: feature:683997-684196:1:region
SIO_000974: 5cf3f185-fe3e-42bb-9173-2d93fd34adb1

position:683997:1
position: 683997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:684196:1
position: 684196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

5cf3f185-fe3e-42bb-9173-2d93fd34adb1
SIO_000300: 1
SIO_000628: feature:683997-684196:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 760559..760758
location: region:760559-760758:1
BFO_0000051: feature:760559-760758:1:region
SIO_000974: 1e68bdfa-258b-42e4-873b-be304707237f

position:760559:1
position: 760559
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:760758:1
position: 760758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

1e68bdfa-258b-42e4-873b-be304707237f
SIO_000300: 1
SIO_000628: feature:760559-760758:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 799167..799366
location: region:799167-799366:1
BFO_0000051: feature:799167-799366:1:region
SIO_000974: 5f68de28-19ec-4cff-8110-f966233cdf30

position:799167:1
position: 799167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:799366:1
position: 799366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

5f68de28-19ec-4cff-8110-f966233cdf30
SIO_000300: 1
SIO_000628: feature:799167-799366:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 843444..843643
location: region:843444-843643:1
BFO_0000051: feature:843444-843643:1:region
SIO_000974: 3ec5a0a4-d656-4b37-bfb4-0781d983fdb6

position:843444:1
position: 843444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:843643:1
position: 843643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

3ec5a0a4-d656-4b37-bfb4-0781d983fdb6
SIO_000300: 1
SIO_000628: feature:843444-843643:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 962238..962437
location: region:962238-962437:1
BFO_0000051: feature:962238-962437:1:region
SIO_000974: 75ef4d8f-959d-46f7-b0dd-76589a8e6267

position:962238:1
position: 962238
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:962437:1
position: 962437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

75ef4d8f-959d-46f7-b0dd-76589a8e6267
SIO_000300: 1
SIO_000628: feature:962238-962437:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 1082541..1082740
location: region:1082541-1082740:1
BFO_0000051: feature:1082541-1082740:1:region
SIO_000974: 965539d7-9a27-4347-aa45-3fed41bbce8e

position:1082541:1
position: 1082541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1082740:1
position: 1082740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

965539d7-9a27-4347-aa45-3fed41bbce8e
SIO_000300: 1
SIO_000628: feature:1082541-1082740:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 1106320..1106519
location: region:1106320-1106519:1
BFO_0000051: feature:1106320-1106519:1:region
SIO_000974: fc0243dc-4805-4891-af4f-f136261cb78c

position:1106320:1
position: 1106320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1106519:1
position: 1106519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

fc0243dc-4805-4891-af4f-f136261cb78c
SIO_000300: 1
SIO_000628: feature:1106320-1106519:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 1142704..1142903
location: region:1142704-1142903:1
BFO_0000051: feature:1142704-1142903:1:region
SIO_000974: dcf53e7c-75ba-4ec9-9115-b7f55fcd3653

position:1142704:1
position: 1142704
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1142903:1
position: 1142903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

dcf53e7c-75ba-4ec9-9115-b7f55fcd3653
SIO_000300: 1
SIO_000628: feature:1142704-1142903:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 1178197..1178396
location: region:1178197-1178396:1
BFO_0000051: feature:1178197-1178396:1:region
SIO_000974: beea4222-76d1-4de0-9e27-73d363684a34

position:1178197:1
position: 1178197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1178396:1
position: 1178396
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

beea4222-76d1-4de0-9e27-73d363684a34
SIO_000300: 1
SIO_000628: feature:1178197-1178396:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 1225870..1226069
location: region:1225870-1226069:1
BFO_0000051: feature:1225870-1226069:1:region
SIO_000974: 9324934b-624c-4459-9228-05a4a78c62a8

position:1225870:1
position: 1225870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1226069:1
position: 1226069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

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SIO_000300: 1
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BFO_0000050: sequence
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BFO_0000050: sequence
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BFO_0000050: sequence
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BFO_0000050: sequence
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SIO_000974: 99c1b946-aacc-43e0-b58e-368f9646ed9a

position:4815687:1
position: 4815687
reference: sequence
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reference: sequence
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99c1b946-aacc-43e0-b58e-368f9646ed9a
SIO_000300: 1
SIO_000628: feature:4815687-4815886:1:region

assembly_gap
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subclass of: SO_0000730
RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:5112363-5112562:1:region
SIO_000974: 22fb51d9-05fc-44ac-aed2-cdc5271f87a0

position:5112363:1
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SIO_000300: 1
SIO_000628: feature:5112363-5112562:1:region

assembly_gap
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RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:5192090-5192289:1:region
SIO_000974: fc8f35dc-a112-4ee0-a754-94ebf7059bbc

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SIO_000300: 1
SIO_000628: feature:5192090-5192289:1:region

assembly_gap
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RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:5239964-5240163:1:region
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SIO_000300: 1
SIO_000628: feature:5239964-5240163:1:region

assembly_gap
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RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:5384988-5385187:1:region
SIO_000974: 721f632f-7299-44cb-8a3f-4c7f6a01b1d1

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SIO_000300: 1
SIO_000628: feature:5384988-5385187:1:region

assembly_gap
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RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:5553684-5553883:1:region
SIO_000974: 6b6c72b5-f20f-4159-b894-3e9f25bddb68

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SIO_000300: 1
SIO_000628: feature:5553684-5553883:1:region

assembly_gap
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RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:5695177-5695376:1:region
SIO_000974: 6954aef2-a2f7-45f1-bfac-1cfaf4eb1eec

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SIO_000300: 1
SIO_000628: feature:5695177-5695376:1:region

assembly_gap
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RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:5959582-5959781:1:region
SIO_000974: 949848f7-0c56-4b57-94eb-d45e239daf67

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SIO_000300: 1
SIO_000628: feature:5959582-5959781:1:region

assembly_gap
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subclass of: SO_0000730
RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:6202135-6202334:1:region
SIO_000974: 6123360b-4900-4850-b6c8-5cf7b513f337

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SIO_000300: 1
SIO_000628: feature:6202135-6202334:1:region

assembly_gap
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subclass of: SO_0000730
RO_0002162: 143735
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:6369568-6369767:1:region
SIO_000974: 123f682f-3bb2-480d-9ccd-2c23c9132594