Lepidonotus clava genome assembly, chromosome: 12.
Eukaryota; Metazoa; Spiralia; Lophotrochozoa; Annelida; Polychaeta; Errantia; Phyllodocida; Polynoidae; Lepidonotus.

Submitted (02-APR-2022) to the INSDC. WELLCOME SANGER INSTITUTE, Tree of Life, Wellcome Genome Campus, Hinxton CB10 1SA, United Kingdom

The assembly wpLepClav1.1 is based on 48x PacBio data, 10X Genomics\nChromium data, and Arima2 Hi-C data generated by the Darwin Tree of\nLife\nProject (https://www.darwintreeoflife.org/). The assembly process\nincluded\nthe following sequence of steps: initial PacBio assembly generation\nwith\nHifiasm, retained haplotig separation with purge_dups, short-read\npolishing\nusing FreeBayes-called variants from 10X Genomics Chromium reads\naligned\nwith LongRanger, and Hi-C based scaffolding with YaHS. The\nmitochondrial\ngenome was assembled using MitoHiFi. Finally, the assembly was\nanalysed and\nmanually improved using gEVAL. Chromosome-scale scaffolds confirmed\nby the\nHi-C data have been named in order of size. Repetitive scaffolds\ninserted\ninto chromosome 15 (~13.7Mb), order and orientation of these\nscaffolds is\nunclear.

Lepidonotus clava genome assembly, chromosome: 13.

Lepidonotus clava genome assembly, chromosome: 14.

Lepidonotus clava genome assembly, chromosome: 15.

Lepidonotus clava genome assembly, chromosome: 16.

Lepidonotus clava genome assembly, chromosome: 17.

Lepidonotus clava genome assembly, chromosome: 18.

Lepidonotus clava genome assembly, organelle: mitochondrion.

Synanthedon andrenaeformis genome assembly, chromosome: Z.
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Lepidoptera; Glossata; Ditrysia; Sesioidea; Sesiidae; Sesiinae; Synanthedonini; Synanthedon.

Submitted (14-SEP-2022) to the INSDC. WELLCOME SANGER INSTITUTE, Tree of Life, Wellcome Genome Campus, Hinxton CB10 1SA, United Kingdom

The assembly ilSynAndr1.2 is based on 106x PacBio data, 10X\nGenomics\nChromium data, and Arima2 Hi-C data generated by the Darwin Tree of\nLife\nProject (https://www.darwintreeoflife.org/). The assembly process\nincluded\nthe following sequence of steps: initial PacBio assembly generation\nwith\nHifiasm, retained haplotig separation with purge_dups, and Hi-C\nbased\nscaffolding with YaHS. The mitochondrial genome was assembled using\nMitoHiFi. Finally, the primary assembly was analysed and manually\nimproved\nusing rapid curation. Chromosome-scale scaffolds confirmed by the\nHi-C data\nhave been named in order of size.

Synanthedon andrenaeformis genome assembly, chromosome: 1.

Synanthedon andrenaeformis genome assembly, chromosome: 2.

Synanthedon andrenaeformis genome assembly, chromosome: 3.

Synanthedon andrenaeformis genome assembly, chromosome: 4.

Synanthedon andrenaeformis genome assembly, chromosome: 5.

Synanthedon andrenaeformis genome assembly, chromosome: 6.

Synanthedon andrenaeformis genome assembly, chromosome: 7.

Synanthedon andrenaeformis genome assembly, chromosome: 8.

Synanthedon andrenaeformis genome assembly, chromosome: 9.

Synanthedon andrenaeformis genome assembly, chromosome: 10.

Synanthedon andrenaeformis genome assembly, chromosome: 11.

Synanthedon andrenaeformis genome assembly, chromosome: 12.

Synanthedon andrenaeformis genome assembly, chromosome: 13.

Synanthedon andrenaeformis genome assembly, chromosome: 14.

Synanthedon andrenaeformis genome assembly, chromosome: 15.

Synanthedon andrenaeformis genome assembly, chromosome: 16.

Synanthedon andrenaeformis genome assembly, chromosome: 17.

Synanthedon andrenaeformis genome assembly, chromosome: 18.

Synanthedon andrenaeformis genome assembly, chromosome: 19.

Synanthedon andrenaeformis genome assembly, chromosome: 20.

Synanthedon andrenaeformis genome assembly, chromosome: 21.

Synanthedon andrenaeformis genome assembly, chromosome: 22.

Synanthedon andrenaeformis genome assembly, chromosome: 23.

Synanthedon andrenaeformis genome assembly, chromosome: 24.

Synanthedon andrenaeformis genome assembly, chromosome: 25.

Synanthedon andrenaeformis genome assembly, chromosome: 26.

Synanthedon andrenaeformis genome assembly, chromosome: 27.

Synanthedon andrenaeformis genome assembly, chromosome: 28.

Synanthedon andrenaeformis genome assembly, chromosome: 29.

Synanthedon andrenaeformis genome assembly, chromosome: 30.

Synanthedon andrenaeformis genome assembly, organelle: mitochondrion.
mitochondrion Synanthedon andrenaeformis

Sarcophaga subvicina genome assembly, chromosome: 1.
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Oestroidea; Sarcophagidae; Sarcophaga; Sarcophaga.

Submitted (30-SEP-2022) to the INSDC. WELLCOME SANGER INSTITUTE, Tree of Life, Wellcome Genome Campus, Hinxton CB10 1SA, United Kingdom

The assembly idSarSubv1.2 is based on 65x PacBio data, 10X Genomics\nChromium data, and Arima2 Hi-C data generated by the Darwin Tree of\nLife\nProject (https://www.darwintreeoflife.org/). The assembly process\nincluded\nthe following sequence of steps: initial PacBio assembly generation\nwith\nHifiasm, retained haplotig separation with purge_dups, and Hi-C\nbased\nscaffolding with YaHS. The mitochondrial genome was assembled using\nMitoHiFi. Finally, the primary assembly was analysed and manually\nimproved\nusing rapid curation. Chromosome-scale scaffolds confirmed by the\nHi-C data\nhave been named in order of size. Male specimen with known XY sex\ndetermination system, however we have been unable to identify Y\nsequences.\nThe X chromosome is assembled from scaffolds of undetermined order\nand\norientation

Sarcophaga subvicina genome assembly, chromosome: 2.

Sarcophaga subvicina genome assembly, chromosome: 3.