Phyto melanocephala genome assembly, chromosome: 3.
type: Entry
definition: Phyto melanocephala genome assembly, chromosome: 3.
sequence version: OW799235.1
sequence date: 2022-05-17
sequence: sequence
division: INV
source: Phyto melanocephala
organism: Phyto melanocephala
taxonomy: Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Oestroidea; Rhinophoridae; Phyto.
reference: 1
comment: The assembly idPhyMeln1.1 is based on 24x PacBio data, 10X Genomics\nChromium data, and Arima2 Hi-C data generated by the Darwin Tree of\nLife\nProject (https://www.darwintreeoflife.org/). The assembly process\nincluded\nthe following sequence of steps: initial PacBio assembly generation\nwith\nHifiasm, retained haplotig separation with purge_dups, and Hi-C\nbased\nscaffolding with YaHS. The mitochondrial genome was assembled using\nMitoHiFi. Finally, the primary assembly was analysed and manually\nimproved\nusing rapid curation. Chromosome-scale scaffolds confirmed by the\nHi-C data\nhave been named in order of size. Order and orientation uncertain\nchromosome X 0-1.29mb and 2.78-4.50mb

sequence
subclass of: SO_0000001
sequence length: 136775264
topology: linear
RO_0000086: SO_0000987
location: 1..136775264
location: region:1-136775264:1
RO_0002162: 1262321

1
journal: Submitted (06-MAY-2022) to the INSDC. WELLCOME SANGER INSTITUTE, Tree of Life, Wellcome Genome Campus, Hinxton CB10 1SA, United Kingdom

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:136775264:1
position: 136775264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-136775264:1:source
BFO_0000050: sequence
organism: Phyto melanocephala
chromosome: 3
mol type: genomic DNA

1262321
type: Taxonomy
SIO_000068: taxonomy

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1262321
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 6161001..6161200
location: region:6161001-6161200:1
BFO_0000051: feature:6161001-6161200:1:region
SIO_000974: 89ca3b09-faac-49c8-b943-8f85feb0fa0c

position:6161001:1
position: 6161001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6161200:1
position: 6161200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

89ca3b09-faac-49c8-b943-8f85feb0fa0c
SIO_000300: 1
SIO_000628: feature:6161001-6161200:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1262321
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 46538791..46538990
location: region:46538791-46538990:1
BFO_0000051: feature:46538791-46538990:1:region
SIO_000974: 7db3e970-1c51-4453-9ce1-84a74ddb410d

position:46538791:1
position: 46538791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:46538990:1
position: 46538990
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

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SIO_000300: 1
SIO_000628: feature:46538791-46538990:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1262321
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 50480189..50480388
location: region:50480189-50480388:1
BFO_0000051: feature:50480189-50480388:1:region
SIO_000974: 61172a43-411f-464e-8ad8-a93477230ba8

position:50480189:1
position: 50480189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:50480388:1
position: 50480388
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

61172a43-411f-464e-8ad8-a93477230ba8
SIO_000300: 1
SIO_000628: feature:50480189-50480388:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1262321
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 50559182..50559381
location: region:50559182-50559381:1
BFO_0000051: feature:50559182-50559381:1:region
SIO_000974: 9044a999-7eac-4165-8b63-5c52e017aa1d

position:50559182:1
position: 50559182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:50559381:1
position: 50559381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

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SIO_000300: 1
SIO_000628: feature:50559182-50559381:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1262321
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 51039834..51040033
location: region:51039834-51040033:1
BFO_0000051: feature:51039834-51040033:1:region
SIO_000974: 24bff60a-489c-4bef-a2f9-7044f4b32e9b

position:51039834:1
position: 51039834
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:51040033:1
position: 51040033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

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SIO_000300: 1
SIO_000628: feature:51039834-51040033:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1262321
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 52253130..52253329
location: region:52253130-52253329:1
BFO_0000051: feature:52253130-52253329:1:region
SIO_000974: e2f80c3d-36f1-4268-9a5c-9b430d5187ca

position:52253130:1
position: 52253130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:52253329:1
position: 52253329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

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SIO_000300: 1
SIO_000628: feature:52253130-52253329:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1262321
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 52463392..52463591
location: region:52463392-52463591:1
BFO_0000051: feature:52463392-52463591:1:region
SIO_000974: 1c85e1fb-a5ba-4582-93fe-9cc9d53c00a2

position:52463392:1
position: 52463392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:52463591:1
position: 52463591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

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SIO_000300: 1
SIO_000628: feature:52463392-52463591:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1262321
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 52914152..52914351
location: region:52914152-52914351:1
BFO_0000051: feature:52914152-52914351:1:region
SIO_000974: f5316bfe-ee79-4878-aa78-518ad5cf7de5

position:52914152:1
position: 52914152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:52914351:1
position: 52914351
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

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SIO_000300: 1
SIO_000628: feature:52914152-52914351:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1262321
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 55499617..55499816
location: region:55499617-55499816:1
BFO_0000051: feature:55499617-55499816:1:region
SIO_000974: 0ba41d58-fa12-4fee-972c-2fd6fbff0e3d

position:55499617:1
position: 55499617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:55499816:1
position: 55499816
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

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SIO_000300: 1
SIO_000628: feature:55499617-55499816:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1262321
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 56703680..56703879
location: region:56703680-56703879:1
BFO_0000051: feature:56703680-56703879:1:region
SIO_000974: e09e113b-28a9-435a-8937-ad965863fbcf

position:56703680:1
position: 56703680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:56703879:1
position: 56703879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

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SIO_000300: 1
SIO_000628: feature:56703680-56703879:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1262321
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 60320994..60321193
location: region:60320994-60321193:1
BFO_0000051: feature:60320994-60321193:1:region
SIO_000974: 8e0381b1-dc1b-4a55-9e04-88d15d6e0843

position:60320994:1
position: 60320994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

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position: 60321193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

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SIO_000300: 1
SIO_000628: feature:60320994-60321193:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1262321
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 69091801..69092000
location: region:69091801-69092000:1
BFO_0000051: feature:69091801-69092000:1:region
SIO_000974: 974c89a8-be4e-44b4-837a-c00261ac2f5a

position:69091801:1
position: 69091801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:69092000:1
position: 69092000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

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SIO_000300: 1
SIO_000628: feature:69091801-69092000:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1262321
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 74742534..74742733
location: region:74742534-74742733:1
BFO_0000051: feature:74742534-74742733:1:region
SIO_000974: 897c10b4-ff51-4e0e-901f-57fa8000f441

position:74742534:1
position: 74742534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:74742733:1
position: 74742733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

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SIO_000300: 1
SIO_000628: feature:74742534-74742733:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1262321
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 76216734..76216933
location: region:76216734-76216933:1
BFO_0000051: feature:76216734-76216933:1:region
SIO_000974: ff0c426c-91d4-466b-b0ee-39ee194a3f1a

position:76216734:1
position: 76216734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:76216933:1
position: 76216933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

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SIO_000300: 1
SIO_000628: feature:76216734-76216933:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1262321
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 76280374..76280573
location: region:76280374-76280573:1
BFO_0000051: feature:76280374-76280573:1:region
SIO_000974: 8f34fda6-97bc-427f-85c4-cc205b03162d

position:76280374:1
position: 76280374
reference: sequence
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type: ExactPosition

position:76280573:1
position: 76280573
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

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SIO_000300: 1
SIO_000628: feature:76280374-76280573:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1262321
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 83086417..83086616
location: region:83086417-83086616:1
BFO_0000051: feature:83086417-83086616:1:region
SIO_000974: c856e9cf-28fa-45e3-9d14-b139115d38cf

position:83086417:1
position: 83086417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:83086616:1
position: 83086616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

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SIO_000300: 1
SIO_000628: feature:83086417-83086616:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1262321
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 85237458..85237657
location: region:85237458-85237657:1
BFO_0000051: feature:85237458-85237657:1:region
SIO_000974: caff782c-1c27-418a-91f9-19545caff38a

position:85237458:1
position: 85237458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:85237657:1
position: 85237657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

caff782c-1c27-418a-91f9-19545caff38a
SIO_000300: 1
SIO_000628: feature:85237458-85237657:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1262321
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 92902420..92902619
location: region:92902420-92902619:1
BFO_0000051: feature:92902420-92902619:1:region
SIO_000974: 6cf63a71-66fa-45f8-936f-ff65fcc7b6f4

position:92902420:1
position: 92902420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:92902619:1
position: 92902619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

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SIO_000300: 1
SIO_000628: feature:92902420-92902619:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1262321
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 100919747..100919946
location: region:100919747-100919946:1
BFO_0000051: feature:100919747-100919946:1:region
SIO_000974: 732ebbc1-c002-48ec-8bea-2f017ec578c5

position:100919747:1
position: 100919747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:100919946:1
position: 100919946
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

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SIO_000300: 1
SIO_000628: feature:100919747-100919946:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1262321
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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location: region:106289876-106290075:1
BFO_0000051: feature:106289876-106290075:1:region
SIO_000974: e23807ef-497b-40a8-b240-8ec66328b7b8

position:106289876:1
position: 106289876
reference: sequence
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position:106290075:1
position: 106290075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

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SIO_000300: 1
SIO_000628: feature:106289876-106290075:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1262321
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 110047012..110047211
location: region:110047012-110047211:1
BFO_0000051: feature:110047012-110047211:1:region
SIO_000974: 6be9387c-978c-4297-9bc3-eb2c985fd5d8

position:110047012:1
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reference: sequence
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type: ExactPosition

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reference: sequence
type: ForwardStrandPosition
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SIO_000300: 1
SIO_000628: feature:110047012-110047211:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1262321
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 111732637..111732836
location: region:111732637-111732836:1
BFO_0000051: feature:111732637-111732836:1:region
SIO_000974: 49745920-cddc-49b7-ac2a-869ae28f7aa7

position:111732637:1
position: 111732637
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:111732836:1
position: 111732836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

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SIO_000300: 1
SIO_000628: feature:111732637-111732836:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1262321
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 136723065..136723264
location: region:136723065-136723264:1
BFO_0000051: feature:136723065-136723264:1:region
SIO_000974: 85b7ee0e-7f7a-45cf-8b5a-da47b06b768e

position:136723065:1
position: 136723065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:136723264:1
position: 136723264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

85b7ee0e-7f7a-45cf-8b5a-da47b06b768e
SIO_000300: 1
SIO_000628: feature:136723065-136723264:1:region

Phyto melanocephala genome assembly, chromosome: 4.
type: Entry
definition: Phyto melanocephala genome assembly, chromosome: 4.
sequence version: OW799236.1
sequence date: 2022-05-17
sequence: sequence
division: INV
source: Phyto melanocephala
organism: Phyto melanocephala
taxonomy: Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Oestroidea; Rhinophoridae; Phyto.
reference: 1
comment: The assembly idPhyMeln1.1 is based on 24x PacBio data, 10X Genomics\nChromium data, and Arima2 Hi-C data generated by the Darwin Tree of\nLife\nProject (https://www.darwintreeoflife.org/). The assembly process\nincluded\nthe following sequence of steps: initial PacBio assembly generation\nwith\nHifiasm, retained haplotig separation with purge_dups, and Hi-C\nbased\nscaffolding with YaHS. The mitochondrial genome was assembled using\nMitoHiFi. Finally, the primary assembly was analysed and manually\nimproved\nusing rapid curation. Chromosome-scale scaffolds confirmed by the\nHi-C data\nhave been named in order of size. Order and orientation uncertain\nchromosome X 0-1.29mb and 2.78-4.50mb

sequence
subclass of: SO_0000001
sequence length: 133596152
topology: linear
RO_0000086: SO_0000987
location: 1..133596152
location: region:1-133596152:1
RO_0002162: 1262321

1
journal: Submitted (06-MAY-2022) to the INSDC. WELLCOME SANGER INSTITUTE, Tree of Life, Wellcome Genome Campus, Hinxton CB10 1SA, United Kingdom

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:133596152:1
position: 133596152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-133596152:1:source
BFO_0000050: sequence
organism: Phyto melanocephala
chromosome: 4
mol type: genomic DNA

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1262321
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 10391774..10391973
location: region:10391774-10391973:1
BFO_0000051: feature:10391774-10391973:1:region
SIO_000974: 89c6105a-3ead-4c03-adac-22ecc3fdcbb1

position:10391774:1
position: 10391774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10391973:1
position: 10391973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

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SIO_000300: 1
SIO_000628: feature:10391774-10391973:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1262321
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 23920853..23921052
location: region:23920853-23921052:1
BFO_0000051: feature:23920853-23921052:1:region
SIO_000974: 915d79c4-37ff-405f-ba82-863d9fab3a19

position:23920853:1
position: 23920853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:23921052:1
position: 23921052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

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SIO_000300: 1
SIO_000628: feature:23920853-23921052:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1262321
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 41753665..41753864
location: region:41753665-41753864:1
BFO_0000051: feature:41753665-41753864:1:region
SIO_000974: 16e307c6-989e-437d-a445-f4799202db47

position:41753665:1
position: 41753665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:41753864:1
position: 41753864
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

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SIO_000300: 1
SIO_000628: feature:41753665-41753864:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1262321
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 43823938..43824137
location: region:43823938-43824137:1
BFO_0000051: feature:43823938-43824137:1:region
SIO_000974: e7d45944-2789-4ef0-bfdb-bd036b388992

position:43823938:1
position: 43823938
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:43824137:1
position: 43824137
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

e7d45944-2789-4ef0-bfdb-bd036b388992
SIO_000300: 1
SIO_000628: feature:43823938-43824137:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1262321
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 50058091..50058290
location: region:50058091-50058290:1
BFO_0000051: feature:50058091-50058290:1:region
SIO_000974: 8c94267f-52d4-40b7-8579-2a74165d2322

position:50058091:1
position: 50058091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:50058290:1
position: 50058290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

8c94267f-52d4-40b7-8579-2a74165d2322
SIO_000300: 1
SIO_000628: feature:50058091-50058290:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1262321
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 51654956..51655155
location: region:51654956-51655155:1
BFO_0000051: feature:51654956-51655155:1:region
SIO_000974: 7eeac279-3217-41f9-93a1-268fdade3aa6

position:51654956:1
position: 51654956
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:51655155:1
position: 51655155
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

7eeac279-3217-41f9-93a1-268fdade3aa6
SIO_000300: 1
SIO_000628: feature:51654956-51655155:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1262321
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 52951156..52951355
location: region:52951156-52951355:1
BFO_0000051: feature:52951156-52951355:1:region
SIO_000974: b2e4030d-7488-459b-ac94-b76354d9edde

position:52951156:1
position: 52951156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:52951355:1
position: 52951355
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

b2e4030d-7488-459b-ac94-b76354d9edde
SIO_000300: 1
SIO_000628: feature:52951156-52951355:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1262321
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 55292356..55292555
location: region:55292356-55292555:1
BFO_0000051: feature:55292356-55292555:1:region
SIO_000974: 9067caab-b304-4c96-a87e-5d56a5df1461

position:55292356:1
position: 55292356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:55292555:1
position: 55292555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

9067caab-b304-4c96-a87e-5d56a5df1461
SIO_000300: 1
SIO_000628: feature:55292356-55292555:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1262321
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 56583161..56583360
location: region:56583161-56583360:1
BFO_0000051: feature:56583161-56583360:1:region
SIO_000974: 26db8c77-dc96-4377-adcf-e25674f59d6c

position:56583161:1
position: 56583161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:56583360:1
position: 56583360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

26db8c77-dc96-4377-adcf-e25674f59d6c
SIO_000300: 1
SIO_000628: feature:56583161-56583360:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1262321
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 56715353..56715552
location: region:56715353-56715552:1
BFO_0000051: feature:56715353-56715552:1:region
SIO_000974: cb1e6fe1-e95a-4ef4-ad10-7df9dac8677f

position:56715353:1
position: 56715353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:56715552:1
position: 56715552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

cb1e6fe1-e95a-4ef4-ad10-7df9dac8677f
SIO_000300: 1
SIO_000628: feature:56715353-56715552:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1262321
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 58060131..58060330
location: region:58060131-58060330:1
BFO_0000051: feature:58060131-58060330:1:region
SIO_000974: e429bd2d-f06c-4742-bfb5-168774e91dba

position:58060131:1
position: 58060131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:58060330:1
position: 58060330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

e429bd2d-f06c-4742-bfb5-168774e91dba
SIO_000300: 1
SIO_000628: feature:58060131-58060330:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1262321
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 58269416..58269615
location: region:58269416-58269615:1
BFO_0000051: feature:58269416-58269615:1:region
SIO_000974: 8e475d8f-c954-4d17-83d3-47d9e0f10272

position:58269416:1
position: 58269416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:58269615:1
position: 58269615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

8e475d8f-c954-4d17-83d3-47d9e0f10272
SIO_000300: 1
SIO_000628: feature:58269416-58269615:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1262321
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 60656085..60656284
location: region:60656085-60656284:1
BFO_0000051: feature:60656085-60656284:1:region
SIO_000974: f391ebc2-9800-42d3-818f-3066c15cc276

position:60656085:1
position: 60656085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:60656284:1
position: 60656284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

f391ebc2-9800-42d3-818f-3066c15cc276
SIO_000300: 1
SIO_000628: feature:60656085-60656284:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1262321
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 62862285..62862484
location: region:62862285-62862484:1
BFO_0000051: feature:62862285-62862484:1:region
SIO_000974: d1c11756-3d66-4ceb-9379-36934c736488

position:62862285:1
position: 62862285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:62862484:1
position: 62862484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

d1c11756-3d66-4ceb-9379-36934c736488
SIO_000300: 1
SIO_000628: feature:62862285-62862484:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1262321
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 63023485..63023684
location: region:63023485-63023684:1
BFO_0000051: feature:63023485-63023684:1:region
SIO_000974: e47ebed7-7aa5-4286-821b-9ac5352690ee

position:63023485:1
position: 63023485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:63023684:1
position: 63023684
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

e47ebed7-7aa5-4286-821b-9ac5352690ee
SIO_000300: 1
SIO_000628: feature:63023485-63023684:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1262321
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 66281765..66281964
location: region:66281765-66281964:1
BFO_0000051: feature:66281765-66281964:1:region
SIO_000974: 82e61a91-2957-43a7-9ae8-575a9ecb5a77

position:66281765:1
position: 66281765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:66281964:1
position: 66281964
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

82e61a91-2957-43a7-9ae8-575a9ecb5a77
SIO_000300: 1
SIO_000628: feature:66281765-66281964:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1262321
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 72632513..72632712
location: region:72632513-72632712:1
BFO_0000051: feature:72632513-72632712:1:region
SIO_000974: c685e6d2-66c6-4202-90ff-4929ebd3381d

position:72632513:1
position: 72632513
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:72632712:1
position: 72632712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

c685e6d2-66c6-4202-90ff-4929ebd3381d
SIO_000300: 1
SIO_000628: feature:72632513-72632712:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1262321
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 84285516..84285715
location: region:84285516-84285715:1
BFO_0000051: feature:84285516-84285715:1:region
SIO_000974: e74f60ef-8e83-4431-82ca-afb729e29616

position:84285516:1
position: 84285516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:84285715:1
position: 84285715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

e74f60ef-8e83-4431-82ca-afb729e29616
SIO_000300: 1
SIO_000628: feature:84285516-84285715:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1262321
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 90350187..90350386
location: region:90350187-90350386:1
BFO_0000051: feature:90350187-90350386:1:region
SIO_000974: 418d8c05-5014-4947-87a1-49af88a4f1fc

position:90350187:1
position: 90350187
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:90350386:1
position: 90350386
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

418d8c05-5014-4947-87a1-49af88a4f1fc
SIO_000300: 1
SIO_000628: feature:90350187-90350386:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1262321
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 98224362..98224561
location: region:98224362-98224561:1
BFO_0000051: feature:98224362-98224561:1:region
SIO_000974: 4d8daff3-b8d5-4345-8f32-f8dcfb831006

position:98224362:1
position: 98224362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:98224561:1
position: 98224561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

4d8daff3-b8d5-4345-8f32-f8dcfb831006
SIO_000300: 1
SIO_000628: feature:98224362-98224561:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1262321
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 120011660..120011859
location: region:120011660-120011859:1
BFO_0000051: feature:120011660-120011859:1:region
SIO_000974: 4764209c-2f70-43ad-9aa7-104e0886bf51

position:120011660:1
position: 120011660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:120011859:1
position: 120011859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

4764209c-2f70-43ad-9aa7-104e0886bf51
SIO_000300: 1
SIO_000628: feature:120011660-120011859:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1262321
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 125051413..125051612
location: region:125051413-125051612:1
BFO_0000051: feature:125051413-125051612:1:region
SIO_000974: 20736c7f-c8a8-4830-b7d3-5646c13afbaa

position:125051413:1
position: 125051413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:125051612:1
position: 125051612
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

20736c7f-c8a8-4830-b7d3-5646c13afbaa
SIO_000300: 1
SIO_000628: feature:125051413-125051612:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1262321
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 133034663..133034862
location: region:133034663-133034862:1
BFO_0000051: feature:133034663-133034862:1:region
SIO_000974: 2735c999-68bf-456a-ba5f-cc87cd7f30b2

position:133034663:1
position: 133034663
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:133034862:1
position: 133034862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

2735c999-68bf-456a-ba5f-cc87cd7f30b2
SIO_000300: 1
SIO_000628: feature:133034663-133034862:1:region

Phyto melanocephala genome assembly, chromosome: 5.
type: Entry
definition: Phyto melanocephala genome assembly, chromosome: 5.
sequence version: OW799237.1
sequence date: 2022-05-17
sequence: sequence
division: INV
source: Phyto melanocephala
organism: Phyto melanocephala
taxonomy: Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Oestroidea; Rhinophoridae; Phyto.
reference: 1
comment: The assembly idPhyMeln1.1 is based on 24x PacBio data, 10X Genomics\nChromium data, and Arima2 Hi-C data generated by the Darwin Tree of\nLife\nProject (https://www.darwintreeoflife.org/). The assembly process\nincluded\nthe following sequence of steps: initial PacBio assembly generation\nwith\nHifiasm, retained haplotig separation with purge_dups, and Hi-C\nbased\nscaffolding with YaHS. The mitochondrial genome was assembled using\nMitoHiFi. Finally, the primary assembly was analysed and manually\nimproved\nusing rapid curation. Chromosome-scale scaffolds confirmed by the\nHi-C data\nhave been named in order of size. Order and orientation uncertain\nchromosome X 0-1.29mb and 2.78-4.50mb

sequence
subclass of: SO_0000001
sequence length: 119657673
topology: linear
RO_0000086: SO_0000987
location: 1..119657673
location: region:1-119657673:1
RO_0002162: 1262321

1
journal: Submitted (06-MAY-2022) to the INSDC. WELLCOME SANGER INSTITUTE, Tree of Life, Wellcome Genome Campus, Hinxton CB10 1SA, United Kingdom

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:119657673:1
position: 119657673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-119657673:1:source
BFO_0000050: sequence
organism: Phyto melanocephala
chromosome: 5
mol type: genomic DNA

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1262321
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 61001..61200
location: region:61001-61200:1
BFO_0000051: feature:61001-61200:1:region
SIO_000974: e43b221e-10eb-436d-9abc-fd0a303f8bd9

position:61001:1
position: 61001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:61200:1
position: 61200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

e43b221e-10eb-436d-9abc-fd0a303f8bd9
SIO_000300: 1
SIO_000628: feature:61001-61200:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1262321
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 21134163..21134362
location: region:21134163-21134362:1
BFO_0000051: feature:21134163-21134362:1:region
SIO_000974: 53b4ddec-caed-4f43-9401-eaddc44d5b47

position:21134163:1
position: 21134163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21134362:1
position: 21134362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

53b4ddec-caed-4f43-9401-eaddc44d5b47
SIO_000300: 1
SIO_000628: feature:21134163-21134362:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1262321
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 21363877..21364076
location: region:21363877-21364076:1
BFO_0000051: feature:21363877-21364076:1:region
SIO_000974: 88432bdc-acc0-4409-813e-c5cce4e16464

position:21363877:1
position: 21363877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21364076:1
position: 21364076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

88432bdc-acc0-4409-813e-c5cce4e16464
SIO_000300: 1
SIO_000628: feature:21363877-21364076:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1262321
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 43898809..43899008
location: region:43898809-43899008:1
BFO_0000051: feature:43898809-43899008:1:region
SIO_000974: 3677dfcc-e4f7-4cfa-b728-26837cb33787

position:43898809:1
position: 43898809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:43899008:1
position: 43899008
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

3677dfcc-e4f7-4cfa-b728-26837cb33787
SIO_000300: 1
SIO_000628: feature:43898809-43899008:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1262321
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 45697187..45697386
location: region:45697187-45697386:1
BFO_0000051: feature:45697187-45697386:1:region
SIO_000974: 25ef4e2d-e071-4720-9565-ed19764ad945

position:45697187:1
position: 45697187
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:45697386:1
position: 45697386
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

25ef4e2d-e071-4720-9565-ed19764ad945
SIO_000300: 1
SIO_000628: feature:45697187-45697386:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1262321
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 46848964..46849163
location: region:46848964-46849163:1
BFO_0000051: feature:46848964-46849163:1:region
SIO_000974: ad6ecc0d-0f00-4f52-9410-a71ee974fc77

position:46848964:1
position: 46848964
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:46849163:1
position: 46849163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ad6ecc0d-0f00-4f52-9410-a71ee974fc77
SIO_000300: 1
SIO_000628: feature:46848964-46849163:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1262321
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 47125198..47125397
location: region:47125198-47125397:1
BFO_0000051: feature:47125198-47125397:1:region
SIO_000974: e3a688dd-f909-422c-8217-d6f69ce5318b

position:47125198:1
position: 47125198
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:47125397:1
position: 47125397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

e3a688dd-f909-422c-8217-d6f69ce5318b
SIO_000300: 1
SIO_000628: feature:47125198-47125397:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1262321
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 48258398..48258597
location: region:48258398-48258597:1
BFO_0000051: feature:48258398-48258597:1:region
SIO_000974: fdecda14-4911-4a12-9a4e-903b1ebd3c51

position:48258398:1
position: 48258398
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:48258597:1
position: 48258597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

fdecda14-4911-4a12-9a4e-903b1ebd3c51
SIO_000300: 1
SIO_000628: feature:48258398-48258597:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1262321
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 49068663..49068862
location: region:49068663-49068862:1
BFO_0000051: feature:49068663-49068862:1:region
SIO_000974: 0e639d35-eac2-4f94-875a-c4895345cc56

position:49068663:1
position: 49068663
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:49068862:1
position: 49068862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

0e639d35-eac2-4f94-875a-c4895345cc56
SIO_000300: 1
SIO_000628: feature:49068663-49068862:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1262321
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 49226649..49226848
location: region:49226649-49226848:1
BFO_0000051: feature:49226649-49226848:1:region
SIO_000974: 34ac3591-42cd-45d5-8be2-cad6aad53261

position:49226649:1
position: 49226649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:49226848:1
position: 49226848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

34ac3591-42cd-45d5-8be2-cad6aad53261
SIO_000300: 1
SIO_000628: feature:49226649-49226848:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1262321
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 49527133..49527332
location: region:49527133-49527332:1
BFO_0000051: feature:49527133-49527332:1:region
SIO_000974: ecb7c2ad-eedf-4a09-97d3-c3baae1107d9

position:49527133:1
position: 49527133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:49527332:1
position: 49527332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ecb7c2ad-eedf-4a09-97d3-c3baae1107d9
SIO_000300: 1
SIO_000628: feature:49527133-49527332:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1262321
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 51696797..51696996
location: region:51696797-51696996:1
BFO_0000051: feature:51696797-51696996:1:region
SIO_000974: c0ea70f7-18e8-47b4-adde-681f1b02114a

position:51696797:1
position: 51696797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:51696996:1
position: 51696996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

c0ea70f7-18e8-47b4-adde-681f1b02114a
SIO_000300: 1
SIO_000628: feature:51696797-51696996:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1262321
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 59535997..59536196
location: region:59535997-59536196:1
BFO_0000051: feature:59535997-59536196:1:region
SIO_000974: 980a443c-80a0-435a-8c3c-36e39fe03550

position:59535997:1
position: 59535997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:59536196:1
position: 59536196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

980a443c-80a0-435a-8c3c-36e39fe03550
SIO_000300: 1
SIO_000628: feature:59535997-59536196:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1262321
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 59634926..59635125
location: region:59634926-59635125:1
BFO_0000051: feature:59634926-59635125:1:region
SIO_000974: c1d685fe-2456-4f69-a03c-45ede2ecde42

position:59634926:1
position: 59634926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:59635125:1
position: 59635125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

c1d685fe-2456-4f69-a03c-45ede2ecde42
SIO_000300: 1
SIO_000628: feature:59634926-59635125:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1262321
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 72802815..72803014
location: region:72802815-72803014:1
BFO_0000051: feature:72802815-72803014:1:region
SIO_000974: 43cd1fcb-61c6-4803-9335-6d820f64c486

position:72802815:1
position: 72802815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:72803014:1
position: 72803014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

43cd1fcb-61c6-4803-9335-6d820f64c486
SIO_000300: 1
SIO_000628: feature:72802815-72803014:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1262321
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 114537577..114537776
location: region:114537577-114537776:1
BFO_0000051: feature:114537577-114537776:1:region
SIO_000974: bb576d2d-cd37-4ad6-99cf-2b58d1f378cc

position:114537577:1
position: 114537577
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:114537776:1
position: 114537776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

bb576d2d-cd37-4ad6-99cf-2b58d1f378cc
SIO_000300: 1
SIO_000628: feature:114537577-114537776:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1262321
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 119297844..119298043
location: region:119297844-119298043:1
BFO_0000051: feature:119297844-119298043:1:region
SIO_000974: 051803df-7d1a-4938-8ddd-e1f765ac4b24

position:119297844:1
position: 119297844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:119298043:1
position: 119298043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

051803df-7d1a-4938-8ddd-e1f765ac4b24
SIO_000300: 1
SIO_000628: feature:119297844-119298043:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1262321
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 119497044..119497243
location: region:119497044-119497243:1
BFO_0000051: feature:119497044-119497243:1:region
SIO_000974: 8bcb2edf-bfeb-4088-8515-aa88946bafc8

position:119497044:1
position: 119497044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:119497243:1
position: 119497243
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

8bcb2edf-bfeb-4088-8515-aa88946bafc8
SIO_000300: 1
SIO_000628: feature:119497044-119497243:1:region

Phyto melanocephala genome assembly, chromosome: X.
type: Entry
definition: Phyto melanocephala genome assembly, chromosome: X.
sequence version: OW799238.1
sequence date: 2022-05-17
sequence: sequence
division: INV
source: Phyto melanocephala
organism: Phyto melanocephala
taxonomy: Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Oestroidea; Rhinophoridae; Phyto.
reference: 1
comment: The assembly idPhyMeln1.1 is based on 24x PacBio data, 10X Genomics\nChromium data, and Arima2 Hi-C data generated by the Darwin Tree of\nLife\nProject (https://www.darwintreeoflife.org/). The assembly process\nincluded\nthe following sequence of steps: initial PacBio assembly generation\nwith\nHifiasm, retained haplotig separation with purge_dups, and Hi-C\nbased\nscaffolding with YaHS. The mitochondrial genome was assembled using\nMitoHiFi. Finally, the primary assembly was analysed and manually\nimproved\nusing rapid curation. Chromosome-scale scaffolds confirmed by the\nHi-C data\nhave been named in order of size. Order and orientation uncertain\nchromosome X 0-1.29mb and 2.78-4.50mb

sequence
subclass of: SO_0000001
sequence length: 26898888
topology: linear
RO_0000086: SO_0000987
location: 1..26898888
location: region:1-26898888:1
RO_0002162: 1262321

1
journal: Submitted (06-MAY-2022) to the INSDC. WELLCOME SANGER INSTITUTE, Tree of Life, Wellcome Genome Campus, Hinxton CB10 1SA, United Kingdom

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:26898888:1
position: 26898888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-26898888:1:source
BFO_0000050: sequence
organism: Phyto melanocephala
chromosome: X
mol type: genomic DNA

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1262321
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 356747..356946
location: region:356747-356946:1
BFO_0000051: feature:356747-356946:1:region
SIO_000974: a091f80d-5724-4d7f-af4b-c6b93d8e0b57

position:356747:1
position: 356747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:356946:1
position: 356946
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

a091f80d-5724-4d7f-af4b-c6b93d8e0b57
SIO_000300: 1
SIO_000628: feature:356747-356946:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1262321
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 698369..698568
location: region:698369-698568:1
BFO_0000051: feature:698369-698568:1:region
SIO_000974: 316c4ec8-280c-4647-9e09-5d726f880087

position:698369:1
position: 698369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:698568:1
position: 698568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

316c4ec8-280c-4647-9e09-5d726f880087
SIO_000300: 1
SIO_000628: feature:698369-698568:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1262321
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 943873..944072
location: region:943873-944072:1
BFO_0000051: feature:943873-944072:1:region
SIO_000974: 56bdd007-2a3f-4df6-990c-8960f58a717f

position:943873:1
position: 943873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:944072:1
position: 944072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

56bdd007-2a3f-4df6-990c-8960f58a717f
SIO_000300: 1
SIO_000628: feature:943873-944072:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1262321
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 1111990..1112189
location: region:1111990-1112189:1
BFO_0000051: feature:1111990-1112189:1:region
SIO_000974: 75ed4600-04d9-4651-b686-6d6c209de40f

position:1111990:1
position: 1111990
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1112189:1
position: 1112189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

75ed4600-04d9-4651-b686-6d6c209de40f
SIO_000300: 1
SIO_000628: feature:1111990-1112189:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1262321
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 1171710..1171909
location: region:1171710-1171909:1
BFO_0000051: feature:1171710-1171909:1:region
SIO_000974: ec06519d-2c20-4ef2-a6c0-72cdc95366ad

position:1171710:1
position: 1171710
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1171909:1
position: 1171909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ec06519d-2c20-4ef2-a6c0-72cdc95366ad
SIO_000300: 1
SIO_000628: feature:1171710-1171909:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1262321
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 1229265..1229464
location: region:1229265-1229464:1
BFO_0000051: feature:1229265-1229464:1:region
SIO_000974: 4ca951a0-746d-40f1-bf8c-1cc44406a5df

position:1229265:1
position: 1229265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1229464:1
position: 1229464
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

4ca951a0-746d-40f1-bf8c-1cc44406a5df
SIO_000300: 1
SIO_000628: feature:1229265-1229464:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1262321
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 1292679..1292878
location: region:1292679-1292878:1
BFO_0000051: feature:1292679-1292878:1:region
SIO_000974: 7a346944-bcd2-4f0b-a5b8-6572867d0aa1

position:1292679:1
position: 1292679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1292878:1
position: 1292878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

7a346944-bcd2-4f0b-a5b8-6572867d0aa1
SIO_000300: 1
SIO_000628: feature:1292679-1292878:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1262321
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 2655787..2655986
location: region:2655787-2655986:1
BFO_0000051: feature:2655787-2655986:1:region
SIO_000974: e8f2118c-e3c4-4db9-ba98-7ce730b71933

position:2655787:1
position: 2655787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2655986:1
position: 2655986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

e8f2118c-e3c4-4db9-ba98-7ce730b71933
SIO_000300: 1
SIO_000628: feature:2655787-2655986:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1262321
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 2698387..2698586
location: region:2698387-2698586:1
BFO_0000051: feature:2698387-2698586:1:region
SIO_000974: 4204e4c4-fe6e-4634-93b2-3c5733eb0a66

position:2698387:1
position: 2698387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2698586:1
position: 2698586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

4204e4c4-fe6e-4634-93b2-3c5733eb0a66
SIO_000300: 1
SIO_000628: feature:2698387-2698586:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1262321
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 2784120..2784319
location: region:2784120-2784319:1
BFO_0000051: feature:2784120-2784319:1:region
SIO_000974: a4f857f5-208c-4ea7-a300-4e278d07aec0

position:2784120:1
position: 2784120
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2784319:1
position: 2784319
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

a4f857f5-208c-4ea7-a300-4e278d07aec0
SIO_000300: 1
SIO_000628: feature:2784120-2784319:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1262321
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 2824545..2824744
location: region:2824545-2824744:1
BFO_0000051: feature:2824545-2824744:1:region
SIO_000974: b6bcd5e7-5c08-42ee-be3a-55c8a60497dd

position:2824545:1
position: 2824545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2824744:1
position: 2824744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

b6bcd5e7-5c08-42ee-be3a-55c8a60497dd
SIO_000300: 1
SIO_000628: feature:2824545-2824744:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1262321
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 2883669..2883868
location: region:2883669-2883868:1
BFO_0000051: feature:2883669-2883868:1:region
SIO_000974: fd9e1e5d-001e-49de-9e27-f47261e24f24

position:2883669:1
position: 2883669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2883868:1
position: 2883868
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

fd9e1e5d-001e-49de-9e27-f47261e24f24
SIO_000300: 1
SIO_000628: feature:2883669-2883868:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1262321
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 2942927..2943126
location: region:2942927-2943126:1
BFO_0000051: feature:2942927-2943126:1:region
SIO_000974: b78a6d13-8680-4687-a032-0a2cd720331c

position:2942927:1
position: 2942927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2943126:1
position: 2943126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

b78a6d13-8680-4687-a032-0a2cd720331c
SIO_000300: 1
SIO_000628: feature:2942927-2943126:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1262321
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 2968503..2968702
location: region:2968503-2968702:1
BFO_0000051: feature:2968503-2968702:1:region
SIO_000974: f48022f4-a5a0-4bd7-b57c-fb17dc59f85a

position:2968503:1
position: 2968503
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2968702:1
position: 2968702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

f48022f4-a5a0-4bd7-b57c-fb17dc59f85a
SIO_000300: 1
SIO_000628: feature:2968503-2968702:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1262321
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 2995287..2995486
location: region:2995287-2995486:1
BFO_0000051: feature:2995287-2995486:1:region
SIO_000974: 41b8302b-c62a-4035-8e8f-e250678cb234

position:2995287:1
position: 2995287
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2995486:1
position: 2995486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

41b8302b-c62a-4035-8e8f-e250678cb234
SIO_000300: 1
SIO_000628: feature:2995287-2995486:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1262321
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 3074258..3074457
location: region:3074258-3074457:1
BFO_0000051: feature:3074258-3074457:1:region
SIO_000974: 87f31949-a79e-49a8-bc83-21f75987d282

position:3074258:1
position: 3074258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3074457:1
position: 3074457
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

87f31949-a79e-49a8-bc83-21f75987d282
SIO_000300: 1
SIO_000628: feature:3074258-3074457:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1262321
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 3114614..3114813
location: region:3114614-3114813:1
BFO_0000051: feature:3114614-3114813:1:region
SIO_000974: bcaad8d9-3f88-4588-b74d-9bde5ad2a87f

position:3114614:1
position: 3114614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3114813:1
position: 3114813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

bcaad8d9-3f88-4588-b74d-9bde5ad2a87f
SIO_000300: 1
SIO_000628: feature:3114614-3114813:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1262321
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 3148213..3148412
location: region:3148213-3148412:1
BFO_0000051: feature:3148213-3148412:1:region
SIO_000974: b27281f8-f1ef-4a2f-a476-9ed93e9103dc

position:3148213:1
position: 3148213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3148412:1
position: 3148412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

b27281f8-f1ef-4a2f-a476-9ed93e9103dc
SIO_000300: 1
SIO_000628: feature:3148213-3148412:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1262321
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 3199289..3199488
location: region:3199289-3199488:1
BFO_0000051: feature:3199289-3199488:1:region
SIO_000974: 74f507b6-dab6-494a-b260-be4847feecf8

position:3199289:1
position: 3199289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3199488:1
position: 3199488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

74f507b6-dab6-494a-b260-be4847feecf8
SIO_000300: 1
SIO_000628: feature:3199289-3199488:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1262321
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 3250328..3250527
location: region:3250328-3250527:1
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type: ForwardStrandPosition
type: ExactPosition

position:5478387:1
position: 5478387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

93825fe4-3cc5-4460-b853-c56307da17c5
SIO_000300: 1
SIO_000628: feature:5478188-5478387:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1262321
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 7092038..7092237
location: region:7092038-7092237:1
BFO_0000051: feature:7092038-7092237:1:region
SIO_000974: 1e8f5030-5e1f-4013-aa05-43929f984350

position:7092038:1
position: 7092038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7092237:1
position: 7092237
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

1e8f5030-5e1f-4013-aa05-43929f984350
SIO_000300: 1
SIO_000628: feature:7092038-7092237:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1262321
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 10237688..10237887
location: region:10237688-10237887:1
BFO_0000051: feature:10237688-10237887:1:region
SIO_000974: 213b7526-4aae-4954-b7af-9129f85ecb10

position:10237688:1
position: 10237688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10237887:1
position: 10237887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

213b7526-4aae-4954-b7af-9129f85ecb10
SIO_000300: 1
SIO_000628: feature:10237688-10237887:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1262321
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 17106539..17106738
location: region:17106539-17106738:1
BFO_0000051: feature:17106539-17106738:1:region
SIO_000974: 6ee20ebb-c641-4ab6-a6b1-33d4d01db4a5

position:17106539:1
position: 17106539
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17106738:1
position: 17106738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

6ee20ebb-c641-4ab6-a6b1-33d4d01db4a5
SIO_000300: 1
SIO_000628: feature:17106539-17106738:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1262321
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 23268953..23269152
location: region:23268953-23269152:1
BFO_0000051: feature:23268953-23269152:1:region
SIO_000974: 5711d7b7-62c8-4051-8f79-3853386c567b

position:23268953:1
position: 23268953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:23269152:1
position: 23269152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

5711d7b7-62c8-4051-8f79-3853386c567b
SIO_000300: 1
SIO_000628: feature:23268953-23269152:1:region

Phyto melanocephala genome assembly, organelle: mitochondrion.
type: Entry
definition: Phyto melanocephala genome assembly, organelle: mitochondrion.
sequence version: OW799239.1
sequence date: 2022-05-17
sequence: sequence
division: INV
source: mitochondrion Phyto melanocephala
organism: Phyto melanocephala
taxonomy: Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Oestroidea; Rhinophoridae; Phyto.
reference: 1
comment: The assembly idPhyMeln1.1 is based on 24x PacBio data, 10X Genomics\nChromium data, and Arima2 Hi-C data generated by the Darwin Tree of\nLife\nProject (https://www.darwintreeoflife.org/). The assembly process\nincluded\nthe following sequence of steps: initial PacBio assembly generation\nwith\nHifiasm, retained haplotig separation with purge_dups, and Hi-C\nbased\nscaffolding with YaHS. The mitochondrial genome was assembled using\nMitoHiFi. Finally, the primary assembly was analysed and manually\nimproved\nusing rapid curation. Chromosome-scale scaffolds confirmed by the\nHi-C data\nhave been named in order of size. Order and orientation uncertain\nchromosome X 0-1.29mb and 2.78-4.50mb

sequence
subclass of: SO_0000001
sequence length: 16280
topology: linear
RO_0000086: SO_0000987
location: 1..16280
location: region:1-16280:1
RO_0002162: 1262321

1
journal: Submitted (06-MAY-2022) to the INSDC. WELLCOME SANGER INSTITUTE, Tree of Life, Wellcome Genome Campus, Hinxton CB10 1SA, United Kingdom

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16280:1
position: 16280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-16280:1:source
BFO_0000050: sequence
organism: Phyto melanocephala
organelle: mitochondrion
mol type: genomic DNA

Sthenelais limicola genome assembly, chromosome: 1.
type: Entry
definition: Sthenelais limicola genome assembly, chromosome: 1.
sequence version: OW804094.1
sequence date: 2022-05-17
sequence: sequence
division: INV
source: Sthenelais limicola
organism: Sthenelais limicola
taxonomy: Eukaryota; Metazoa; Spiralia; Lophotrochozoa; Annelida; Polychaeta; Errantia; Phyllodocida; Sigalionidae; Sthenelais.
reference: 1
comment: The assembly wpSthLimi1.1 is based on 45x PacBio data, 10X Genomics\nChromium data, and Arima2 Hi-C data generated by the Darwin Tree of\nLife\nProject (https://www.darwintreeoflife.org/). The assembly process\nincluded\nthe following sequence of steps: initial PacBio assembly generation\nwith\nHifiasm, retained haplotig separation with purge_dups, and Hi-C\nbased\nscaffolding with YaHS. The mitochondrial genome was assembled using\nMitoHiFi. Finally, the primary assembly was analysed and manually\nimproved\nusing gEVAL. Chromosome-scale scaffolds confirmed by the Hi-C data\nhave\nbeen named in order of size. Scaffold order and orientation is\nuncertain\nchromosome 6 0.39-8.86mb. Heterozygous inversion chromosome 7\n76.84-95.76mb.

sequence
subclass of: SO_0000001
sequence length: 161876864
topology: linear
RO_0000086: SO_0000987
location: 1..161876864
location: region:1-161876864:1
RO_0002162: 1210413

1
journal: Submitted (07-MAY-2022) to the INSDC. WELLCOME SANGER INSTITUTE, Tree of Life, Wellcome Genome Campus, Hinxton CB10 1SA, United Kingdom

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:161876864:1
position: 161876864
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-161876864:1:source
BFO_0000050: sequence
organism: Sthenelais limicola
chromosome: 1
mol type: genomic DNA

1210413
type: Taxonomy
SIO_000068: taxonomy

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 63572..63771
location: region:63572-63771:1
BFO_0000051: feature:63572-63771:1:region
SIO_000974: 53007b97-a5a9-444f-b026-83771428a892

position:63572:1
position: 63572
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:63771:1
position: 63771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

53007b97-a5a9-444f-b026-83771428a892
SIO_000300: 1
SIO_000628: feature:63572-63771:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 208971..209170
location: region:208971-209170:1
BFO_0000051: feature:208971-209170:1:region
SIO_000974: 0df88edd-1aa6-443a-9089-c8cab1ddce1d

position:208971:1
position: 208971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:209170:1
position: 209170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

0df88edd-1aa6-443a-9089-c8cab1ddce1d
SIO_000300: 1
SIO_000628: feature:208971-209170:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 353799..353998
location: region:353799-353998:1
BFO_0000051: feature:353799-353998:1:region
SIO_000974: c19710b2-4712-4c69-9e7a-956188d3780a

position:353799:1
position: 353799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:353998:1
position: 353998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

c19710b2-4712-4c69-9e7a-956188d3780a
SIO_000300: 1
SIO_000628: feature:353799-353998:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 433999..434198
location: region:433999-434198:1
BFO_0000051: feature:433999-434198:1:region
SIO_000974: 4298f9be-940f-453f-bd8e-13ed8c655ab7

position:433999:1
position: 433999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:434198:1
position: 434198
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

4298f9be-940f-453f-bd8e-13ed8c655ab7
SIO_000300: 1
SIO_000628: feature:433999-434198:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 459924..460123
location: region:459924-460123:1
BFO_0000051: feature:459924-460123:1:region
SIO_000974: c4660357-77ec-4b90-8dd1-dc0cc294196a

position:459924:1
position: 459924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:460123:1
position: 460123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

c4660357-77ec-4b90-8dd1-dc0cc294196a
SIO_000300: 1
SIO_000628: feature:459924-460123:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 484556..484755
location: region:484556-484755:1
BFO_0000051: feature:484556-484755:1:region
SIO_000974: 5b407790-b5ba-4926-bf0f-c7c339dae8c9

position:484556:1
position: 484556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:484755:1
position: 484755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

5b407790-b5ba-4926-bf0f-c7c339dae8c9
SIO_000300: 1
SIO_000628: feature:484556-484755:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 520302..520501
location: region:520302-520501:1
BFO_0000051: feature:520302-520501:1:region
SIO_000974: ea648142-589a-4620-aeb9-56a9ae4fc1ee

position:520302:1
position: 520302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:520501:1
position: 520501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ea648142-589a-4620-aeb9-56a9ae4fc1ee
SIO_000300: 1
SIO_000628: feature:520302-520501:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 614498..614697
location: region:614498-614697:1
BFO_0000051: feature:614498-614697:1:region
SIO_000974: 873611a5-7b56-42de-91f0-4edb9ca2159b

position:614498:1
position: 614498
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:614697:1
position: 614697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

873611a5-7b56-42de-91f0-4edb9ca2159b
SIO_000300: 1
SIO_000628: feature:614498-614697:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 950816..951015
location: region:950816-951015:1
BFO_0000051: feature:950816-951015:1:region
SIO_000974: 0261c11a-db6b-4aba-9811-cabd6b5142ca

position:950816:1
position: 950816
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:951015:1
position: 951015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

0261c11a-db6b-4aba-9811-cabd6b5142ca
SIO_000300: 1
SIO_000628: feature:950816-951015:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 975491..975690
location: region:975491-975690:1
BFO_0000051: feature:975491-975690:1:region
SIO_000974: 36229ea7-9dc3-458d-8468-5862b9a2761b

position:975491:1
position: 975491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:975690:1
position: 975690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

36229ea7-9dc3-458d-8468-5862b9a2761b
SIO_000300: 1
SIO_000628: feature:975491-975690:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 997862..998061
location: region:997862-998061:1
BFO_0000051: feature:997862-998061:1:region
SIO_000974: 8a3cdf1a-1254-4830-9b6b-57f3673bb500

position:997862:1
position: 997862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:998061:1
position: 998061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

8a3cdf1a-1254-4830-9b6b-57f3673bb500
SIO_000300: 1
SIO_000628: feature:997862-998061:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 1039085..1039284
location: region:1039085-1039284:1
BFO_0000051: feature:1039085-1039284:1:region
SIO_000974: 6cdb0544-f55d-46d9-aad8-51e91fac117f

position:1039085:1
position: 1039085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1039284:1
position: 1039284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

6cdb0544-f55d-46d9-aad8-51e91fac117f
SIO_000300: 1
SIO_000628: feature:1039085-1039284:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 1319025..1319224
location: region:1319025-1319224:1
BFO_0000051: feature:1319025-1319224:1:region
SIO_000974: a756aea5-cfe0-4eaf-a5b4-9aab1ded892e

position:1319025:1
position: 1319025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1319224:1
position: 1319224
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

a756aea5-cfe0-4eaf-a5b4-9aab1ded892e
SIO_000300: 1
SIO_000628: feature:1319025-1319224:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 1348781..1348980
location: region:1348781-1348980:1
BFO_0000051: feature:1348781-1348980:1:region
SIO_000974: 08ee8192-8f3d-495f-bf7f-abef91cfbe24

position:1348781:1
position: 1348781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1348980:1
position: 1348980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

08ee8192-8f3d-495f-bf7f-abef91cfbe24
SIO_000300: 1
SIO_000628: feature:1348781-1348980:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 3411242..3411441
location: region:3411242-3411441:1
BFO_0000051: feature:3411242-3411441:1:region
SIO_000974: 688690ba-0262-411f-be19-368349ccb9e8

position:3411242:1
position: 3411242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3411441:1
position: 3411441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

688690ba-0262-411f-be19-368349ccb9e8
SIO_000300: 1
SIO_000628: feature:3411242-3411441:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 3963302..3963501
location: region:3963302-3963501:1
BFO_0000051: feature:3963302-3963501:1:region
SIO_000974: f603477c-49a9-4240-a79e-ffaf6dc7c2dc

position:3963302:1
position: 3963302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3963501:1
position: 3963501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

f603477c-49a9-4240-a79e-ffaf6dc7c2dc
SIO_000300: 1
SIO_000628: feature:3963302-3963501:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 4306603..4306802
location: region:4306603-4306802:1
BFO_0000051: feature:4306603-4306802:1:region
SIO_000974: a76d555a-5735-4f5b-bd56-515958369fa6

position:4306603:1
position: 4306603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4306802:1
position: 4306802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

a76d555a-5735-4f5b-bd56-515958369fa6
SIO_000300: 1
SIO_000628: feature:4306603-4306802:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 4610967..4611166
location: region:4610967-4611166:1
BFO_0000051: feature:4610967-4611166:1:region
SIO_000974: 1180cc94-4e27-4b71-ae63-0f91f3a830ad

position:4610967:1
position: 4610967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4611166:1
position: 4611166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

1180cc94-4e27-4b71-ae63-0f91f3a830ad
SIO_000300: 1
SIO_000628: feature:4610967-4611166:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 4834529..4834728
location: region:4834529-4834728:1
BFO_0000051: feature:4834529-4834728:1:region
SIO_000974: abd55cf3-23a1-4401-9d95-357fe1ea7718

position:4834529:1
position: 4834529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4834728:1
position: 4834728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

abd55cf3-23a1-4401-9d95-357fe1ea7718
SIO_000300: 1
SIO_000628: feature:4834529-4834728:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 4897717..4897916
location: region:4897717-4897916:1
BFO_0000051: feature:4897717-4897916:1:region
SIO_000974: eefa721d-2106-4f24-8347-d5da1327c781

position:4897717:1
position: 4897717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4897916:1
position: 4897916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

eefa721d-2106-4f24-8347-d5da1327c781
SIO_000300: 1
SIO_000628: feature:4897717-4897916:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 5190300..5190499
location: region:5190300-5190499:1
BFO_0000051: feature:5190300-5190499:1:region
SIO_000974: d5af4b81-aafa-43e9-b7bc-9242ef7a7573

position:5190300:1
position: 5190300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5190499:1
position: 5190499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

d5af4b81-aafa-43e9-b7bc-9242ef7a7573
SIO_000300: 1
SIO_000628: feature:5190300-5190499:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 5236928..5237127
location: region:5236928-5237127:1
BFO_0000051: feature:5236928-5237127:1:region
SIO_000974: 149d8bcb-bce5-4ada-af05-31419368c686

position:5236928:1
position: 5236928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5237127:1
position: 5237127
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

149d8bcb-bce5-4ada-af05-31419368c686
SIO_000300: 1
SIO_000628: feature:5236928-5237127:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 6412736..6412935
location: region:6412736-6412935:1
BFO_0000051: feature:6412736-6412935:1:region
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position:6412736:1
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7bcca643-6901-4016-aa41-0a0eeac192ff
SIO_000300: 1
SIO_000628: feature:6412736-6412935:1:region

assembly_gap
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RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:7943355-7943554:1:region
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SIO_000300: 1
SIO_000628: feature:7943355-7943554:1:region

assembly_gap
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RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:11006686-11006885:1:region
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SIO_000300: 1
SIO_000628: feature:11006686-11006885:1:region

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RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:11090562-11090761:1:region
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SIO_000300: 1
SIO_000628: feature:11090562-11090761:1:region

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RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:12061225-12061424:1:region
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SIO_000300: 1
SIO_000628: feature:12061225-12061424:1:region

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RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:12327171-12327370:1:region
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SIO_000300: 1
SIO_000628: feature:12327171-12327370:1:region

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RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:12349392-12349591:1:region
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SIO_000300: 1
SIO_000628: feature:12349392-12349591:1:region

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RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:12615932-12616131:1:region
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SIO_000300: 1
SIO_000628: feature:12615932-12616131:1:region

assembly_gap
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RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:12887065-12887264:1:region
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SIO_000300: 1
SIO_000628: feature:12887065-12887264:1:region

assembly_gap
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RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:13349582-13349781:1:region
SIO_000974: b2839433-d858-4ea1-ab04-fec92c37df5b

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SIO_000300: 1
SIO_000628: feature:13349582-13349781:1:region

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RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:14185511-14185710:1:region
SIO_000974: 3e12d6b4-1998-40d9-bdff-64864a46d8f4

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reference: sequence
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SIO_000300: 1
SIO_000628: feature:14185511-14185710:1:region

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RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:14528973-14529172:1:region
SIO_000974: 4f5088cd-e590-44ff-b10e-100b48a404c3

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reference: sequence
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SIO_000300: 1
SIO_000628: feature:14528973-14529172:1:region

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RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:14584008-14584207:1:region
SIO_000974: cce1b3d3-d5c6-498c-b378-92bebd3d48d3

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SIO_000300: 1
SIO_000628: feature:14584008-14584207:1:region

assembly_gap
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RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:16555367-16555566:1:region
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SIO_000300: 1
SIO_000628: feature:16555367-16555566:1:region

assembly_gap
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RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:18094803-18095002:1:region
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SIO_000300: 1
SIO_000628: feature:18094803-18095002:1:region

assembly_gap
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RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:18323913-18324112:1:region
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SIO_000300: 1
SIO_000628: feature:18323913-18324112:1:region

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RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:18461975-18462174:1:region
SIO_000974: 04a879c9-7c7c-4175-8a30-40246cee88af

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SIO_000300: 1
SIO_000628: feature:18461975-18462174:1:region

assembly_gap
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RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:20417732-20417931:1:region
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reference: sequence
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SIO_000300: 1
SIO_000628: feature:20417732-20417931:1:region

assembly_gap
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RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:20946904-20947103:1:region
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SIO_000300: 1
SIO_000628: feature:20946904-20947103:1:region

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RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:21007623-21007822:1:region
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SIO_000300: 1
SIO_000628: feature:21007623-21007822:1:region

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RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:22921166-22921365:1:region
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reference: sequence
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SIO_000300: 1
SIO_000628: feature:22921166-22921365:1:region

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RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:23365092-23365291:1:region
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SIO_000300: 1
SIO_000628: feature:23365092-23365291:1:region

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RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:24410935-24411134:1:region
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SIO_000300: 1
SIO_000628: feature:24410935-24411134:1:region

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RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:25111483-25111682:1:region
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SIO_000300: 1
SIO_000628: feature:25111483-25111682:1:region

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estimated length: 200
gap type: unknown
BFO_0000050: sequence
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SIO_000300: 1
SIO_000628: feature:42489395-42489594:1:region

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gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:45194766-45194965:1:region
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SIO_000300: 1
SIO_000628: feature:45194766-45194965:1:region

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RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:56262802-56263001:1:region
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SIO_000300: 1
SIO_000628: feature:56262802-56263001:1:region

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RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:59183945-59184144:1:region
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SIO_000300: 1
SIO_000628: feature:59183945-59184144:1:region

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RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:61086130-61086329:1:region
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SIO_000300: 1
SIO_000628: feature:61086130-61086329:1:region

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gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:82797168-82797367:1:region
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SIO_000300: 1
SIO_000628: feature:82797168-82797367:1:region

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RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:105961677-105961876:1:region
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SIO_000300: 1
SIO_000628: feature:105961677-105961876:1:region

assembly_gap
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RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 105998419..105998618
location: region:105998419-105998618:1
BFO_0000051: feature:105998419-105998618:1:region
SIO_000974: 4c0439f1-f26d-40b3-a12c-96381e559035

position:105998419:1
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position:105998618:1
position: 105998618
reference: sequence
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4c0439f1-f26d-40b3-a12c-96381e559035
SIO_000300: 1
SIO_000628: feature:105998419-105998618:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 106094555..106094754
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BFO_0000051: feature:106094555-106094754:1:region
SIO_000974: 66dc208c-3520-421e-a6f8-276b43ed5a8b

position:106094555:1
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position:106094754:1
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SIO_000300: 1
SIO_000628: feature:106094555-106094754:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:136074439-136074638:1:region
SIO_000974: 2e11a90f-d055-46e5-8e09-f486969b9518

position:136074439:1
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SIO_000300: 1
SIO_000628: feature:136074439-136074638:1:region

assembly_gap
type: Assembly Gap
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RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:137074658-137074857:1:region
SIO_000974: fc174397-5f46-4fbe-b2a5-6c7e16a74417

position:137074658:1
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position:137074857:1
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reference: sequence
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SIO_000300: 1
SIO_000628: feature:137074658-137074857:1:region

assembly_gap
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subclass of: SO_0000730
RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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location: region:137200015-137200214:1
BFO_0000051: feature:137200015-137200214:1:region
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SIO_000300: 1
SIO_000628: feature:137200015-137200214:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:137434912-137435111:1:region
SIO_000974: 97957402-e54c-42b3-bcb5-cd05e075ed56

position:137434912:1
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position:137435111:1
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reference: sequence
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SIO_000300: 1
SIO_000628: feature:137434912-137435111:1:region

assembly_gap
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subclass of: SO_0000730
RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:137720969-137721168:1:region
SIO_000974: f48137ce-bbc8-46cf-8be6-b9ddb8d8b9e3

position:137720969:1
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position:137721168:1
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SIO_000300: 1
SIO_000628: feature:137720969-137721168:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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location: region:137792559-137792758:1
BFO_0000051: feature:137792559-137792758:1:region
SIO_000974: 956219d4-4e8f-4d9b-aef9-45bdf7555900

position:137792559:1
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position:137792758:1
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SIO_000300: 1
SIO_000628: feature:137792559-137792758:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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location: region:137857872-137858071:1
BFO_0000051: feature:137857872-137858071:1:region
SIO_000974: 6ee3af69-b23f-4286-b00e-aa23647ad272

position:137857872:1
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position:137858071:1
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reference: sequence
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SIO_000300: 1
SIO_000628: feature:137857872-137858071:1:region

assembly_gap
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subclass of: SO_0000730
RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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location: region:138463588-138463787:1
BFO_0000051: feature:138463588-138463787:1:region
SIO_000974: c72ad6de-ced1-4390-8bec-0220c220653c

position:138463588:1
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position:138463787:1
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reference: sequence
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c72ad6de-ced1-4390-8bec-0220c220653c
SIO_000300: 1
SIO_000628: feature:138463588-138463787:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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location: region:140325164-140325363:1
BFO_0000051: feature:140325164-140325363:1:region
SIO_000974: 8d631ae8-8c25-4071-9903-0ad876d163a6

position:140325164:1
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position:140325363:1
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reference: sequence
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8d631ae8-8c25-4071-9903-0ad876d163a6
SIO_000300: 1
SIO_000628: feature:140325164-140325363:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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location: region:142778364-142778563:1
BFO_0000051: feature:142778364-142778563:1:region
SIO_000974: 108e16ec-a1c5-423e-a927-c0f1d87f0e74

position:142778364:1
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position:142778563:1
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108e16ec-a1c5-423e-a927-c0f1d87f0e74
SIO_000300: 1
SIO_000628: feature:142778364-142778563:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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location: region:142908082-142908281:1
BFO_0000051: feature:142908082-142908281:1:region
SIO_000974: 276ce96e-9277-4ca6-a700-36e90702a6ef

position:142908082:1
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reference: sequence
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position:142908281:1
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reference: sequence
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SIO_000300: 1
SIO_000628: feature:142908082-142908281:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:144131702-144131901:1:region
SIO_000974: 2d9ad5a7-9a75-40ad-88d9-f304e09463fa

position:144131702:1
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position:144131901:1
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2d9ad5a7-9a75-40ad-88d9-f304e09463fa
SIO_000300: 1
SIO_000628: feature:144131702-144131901:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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location: region:145019687-145019886:1
BFO_0000051: feature:145019687-145019886:1:region
SIO_000974: 537546fb-e678-4383-8997-ba59cbbaadd9

position:145019687:1
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reference: sequence
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reference: sequence
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537546fb-e678-4383-8997-ba59cbbaadd9
SIO_000300: 1
SIO_000628: feature:145019687-145019886:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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location: region:145173798-145173997:1
BFO_0000051: feature:145173798-145173997:1:region
SIO_000974: 1a1481d6-9c50-48ec-9b58-52d14210f552

position:145173798:1
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position:145173997:1
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reference: sequence
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SIO_000300: 1
SIO_000628: feature:145173798-145173997:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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location: region:146142887-146143086:1
BFO_0000051: feature:146142887-146143086:1:region
SIO_000974: 76b7f078-dac8-42e7-8672-5df15f86b762

position:146142887:1
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position:146143086:1
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reference: sequence
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SIO_000300: 1
SIO_000628: feature:146142887-146143086:1:region

assembly_gap
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subclass of: SO_0000730
RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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location: region:146143756-146143955:1
BFO_0000051: feature:146143756-146143955:1:region
SIO_000974: 9b2250a1-75c5-4db3-a0b6-3a40a6d79f91

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position:146143955:1
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reference: sequence
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9b2250a1-75c5-4db3-a0b6-3a40a6d79f91
SIO_000300: 1
SIO_000628: feature:146143756-146143955:1:region

assembly_gap
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subclass of: SO_0000730
RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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location: region:146329371-146329570:1
BFO_0000051: feature:146329371-146329570:1:region
SIO_000974: 9c8b9e0d-2e4b-4369-a0f3-a68c02f8241e

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position:146329570:1
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reference: sequence
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SIO_000300: 1
SIO_000628: feature:146329371-146329570:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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location: region:147028796-147028995:1
BFO_0000051: feature:147028796-147028995:1:region
SIO_000974: 8c315607-6f17-4d15-9675-d19b710458d2

position:147028796:1
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SIO_000300: 1
SIO_000628: feature:147028796-147028995:1:region

assembly_gap
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subclass of: SO_0000730
RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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location: region:148566704-148566903:1
BFO_0000051: feature:148566704-148566903:1:region
SIO_000974: cf8f1c1b-eba6-4985-adc4-be33dea9fa7c

position:148566704:1
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position:148566903:1
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SIO_000300: 1
SIO_000628: feature:148566704-148566903:1:region

assembly_gap
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subclass of: SO_0000730
RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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location: region:149406249-149406448:1
BFO_0000051: feature:149406249-149406448:1:region
SIO_000974: a9339124-d4f8-4ca0-8358-dc3f39d71f83

position:149406249:1
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reference: sequence
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SIO_000300: 1
SIO_000628: feature:149406249-149406448:1:region

assembly_gap
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subclass of: SO_0000730
RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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location: region:150986700-150986899:1
BFO_0000051: feature:150986700-150986899:1:region
SIO_000974: 8293fa92-5ffa-4414-a667-1c7ab46132d3

position:150986700:1
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reference: sequence
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SIO_000300: 1
SIO_000628: feature:150986700-150986899:1:region

assembly_gap
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subclass of: SO_0000730
RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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location: region:151070990-151071189:1
BFO_0000051: feature:151070990-151071189:1:region
SIO_000974: 6d8b776f-a40a-4cea-92c5-aa485407e63f

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position:151071189:1
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SIO_000300: 1
SIO_000628: feature:151070990-151071189:1:region

assembly_gap
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subclass of: SO_0000730
RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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location: region:151465976-151466175:1
BFO_0000051: feature:151465976-151466175:1:region
SIO_000974: f7dd0cfa-61d4-4543-972e-3c7306107856

position:151465976:1
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position:151466175:1
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reference: sequence
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SIO_000300: 1
SIO_000628: feature:151465976-151466175:1:region

assembly_gap
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RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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location: region:151513857-151514056:1
BFO_0000051: feature:151513857-151514056:1:region
SIO_000974: c9ebcc25-4cf1-4446-9669-7fc6fc7f637e

position:151513857:1
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reference: sequence
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SIO_000300: 1
SIO_000628: feature:151513857-151514056:1:region

assembly_gap
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subclass of: SO_0000730
RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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location: region:151949792-151949991:1
BFO_0000051: feature:151949792-151949991:1:region
SIO_000974: 8c2f35c6-c4db-483a-ab28-8dd3aa4e6e2e

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SIO_000300: 1
SIO_000628: feature:151949792-151949991:1:region

assembly_gap
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subclass of: SO_0000730
RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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location: region:152131972-152132171:1
BFO_0000051: feature:152131972-152132171:1:region
SIO_000974: f7029627-e0d1-4f6b-817c-853e043251e5

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reference: sequence
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SIO_000300: 1
SIO_000628: feature:152131972-152132171:1:region

assembly_gap
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subclass of: SO_0000730
RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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location: region:153767506-153767705:1
BFO_0000051: feature:153767506-153767705:1:region
SIO_000974: 5ef8bb1a-ceee-495c-848e-8837af7e2b80

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SIO_000300: 1
SIO_000628: feature:153767506-153767705:1:region

assembly_gap
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subclass of: SO_0000730
RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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location: region:154081587-154081786:1
BFO_0000051: feature:154081587-154081786:1:region
SIO_000974: dcefc2d1-25cb-4497-961e-bb76933b362a

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reference: sequence
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SIO_000300: 1
SIO_000628: feature:154081587-154081786:1:region

assembly_gap
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subclass of: SO_0000730
RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 154184225..154184424
location: region:154184225-154184424:1
BFO_0000051: feature:154184225-154184424:1:region
SIO_000974: 994fa462-76da-4002-87f9-ad7101953424

position:154184225:1
position: 154184225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:154184424:1
position: 154184424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

994fa462-76da-4002-87f9-ad7101953424
SIO_000300: 1
SIO_000628: feature:154184225-154184424:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 154207973..154208172
location: region:154207973-154208172:1
BFO_0000051: feature:154207973-154208172:1:region
SIO_000974: acb6ef66-7fa8-4539-bd11-814560ea2697

position:154207973:1
position: 154207973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:154208172:1
position: 154208172
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

acb6ef66-7fa8-4539-bd11-814560ea2697
SIO_000300: 1
SIO_000628: feature:154207973-154208172:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 154436735..154436934
location: region:154436735-154436934:1
BFO_0000051: feature:154436735-154436934:1:region
SIO_000974: e6738db0-4514-48ea-b54e-375d303c81f7

position:154436735:1
position: 154436735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:154436934:1
position: 154436934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

e6738db0-4514-48ea-b54e-375d303c81f7
SIO_000300: 1
SIO_000628: feature:154436735-154436934:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 154522840..154523039
location: region:154522840-154523039:1
BFO_0000051: feature:154522840-154523039:1:region
SIO_000974: 5a2904e8-a341-47c2-8a2b-bf864cc60a83

position:154522840:1
position: 154522840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:154523039:1
position: 154523039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

5a2904e8-a341-47c2-8a2b-bf864cc60a83
SIO_000300: 1
SIO_000628: feature:154522840-154523039:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 154555000..154555199
location: region:154555000-154555199:1
BFO_0000051: feature:154555000-154555199:1:region
SIO_000974: 69519560-501e-42f2-b975-fb2663f5c1a3

position:154555000:1
position: 154555000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:154555199:1
position: 154555199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

69519560-501e-42f2-b975-fb2663f5c1a3
SIO_000300: 1
SIO_000628: feature:154555000-154555199:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 154987766..154987965
location: region:154987766-154987965:1
BFO_0000051: feature:154987766-154987965:1:region
SIO_000974: 8eb4f39f-aea2-4799-8c4f-4a0a521e222e

position:154987766:1
position: 154987766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:154987965:1
position: 154987965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

8eb4f39f-aea2-4799-8c4f-4a0a521e222e
SIO_000300: 1
SIO_000628: feature:154987766-154987965:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 155039635..155039834
location: region:155039635-155039834:1
BFO_0000051: feature:155039635-155039834:1:region
SIO_000974: 77e5c740-9a10-4220-bb5c-eb3ff5f8f510

position:155039635:1
position: 155039635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:155039834:1
position: 155039834
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

77e5c740-9a10-4220-bb5c-eb3ff5f8f510
SIO_000300: 1
SIO_000628: feature:155039635-155039834:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 155124300..155124499
location: region:155124300-155124499:1
BFO_0000051: feature:155124300-155124499:1:region
SIO_000974: ebfba785-ca72-4e6c-b8ae-86cc9514a8e7

position:155124300:1
position: 155124300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:155124499:1
position: 155124499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ebfba785-ca72-4e6c-b8ae-86cc9514a8e7
SIO_000300: 1
SIO_000628: feature:155124300-155124499:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 155229041..155229240
location: region:155229041-155229240:1
BFO_0000051: feature:155229041-155229240:1:region
SIO_000974: 25c43bd6-ac86-47d0-a8b6-f267e6e5db29

position:155229041:1
position: 155229041
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:155229240:1
position: 155229240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

25c43bd6-ac86-47d0-a8b6-f267e6e5db29
SIO_000300: 1
SIO_000628: feature:155229041-155229240:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 155315243..155315442
location: region:155315243-155315442:1
BFO_0000051: feature:155315243-155315442:1:region
SIO_000974: 278fbbf4-af0b-4857-955f-07a41ff438f2

position:155315243:1
position: 155315243
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:155315442:1
position: 155315442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

278fbbf4-af0b-4857-955f-07a41ff438f2
SIO_000300: 1
SIO_000628: feature:155315243-155315442:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 155828222..155828421
location: region:155828222-155828421:1
BFO_0000051: feature:155828222-155828421:1:region
SIO_000974: 5944b196-f583-48b3-b85a-77a232054c1d

position:155828222:1
position: 155828222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:155828421:1
position: 155828421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

5944b196-f583-48b3-b85a-77a232054c1d
SIO_000300: 1
SIO_000628: feature:155828222-155828421:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 156024689..156024888
location: region:156024689-156024888:1
BFO_0000051: feature:156024689-156024888:1:region
SIO_000974: 34da815a-6599-4492-97ae-5c1f4e08d206

position:156024689:1
position: 156024689
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:156024888:1
position: 156024888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

34da815a-6599-4492-97ae-5c1f4e08d206
SIO_000300: 1
SIO_000628: feature:156024689-156024888:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 157385421..157385620
location: region:157385421-157385620:1
BFO_0000051: feature:157385421-157385620:1:region
SIO_000974: cf1445b5-213f-4645-a9ca-cae63e1da101

position:157385421:1
position: 157385421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:157385620:1
position: 157385620
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

cf1445b5-213f-4645-a9ca-cae63e1da101
SIO_000300: 1
SIO_000628: feature:157385421-157385620:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 158269516..158269715
location: region:158269516-158269715:1
BFO_0000051: feature:158269516-158269715:1:region
SIO_000974: 66d06def-b232-4330-8075-fff0300cfb30

position:158269516:1
position: 158269516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:158269715:1
position: 158269715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

66d06def-b232-4330-8075-fff0300cfb30
SIO_000300: 1
SIO_000628: feature:158269516-158269715:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 158587377..158587576
location: region:158587377-158587576:1
BFO_0000051: feature:158587377-158587576:1:region
SIO_000974: 85fb2c1f-4d8a-4481-be30-c3d6999f874c

position:158587377:1
position: 158587377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:158587576:1
position: 158587576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

85fb2c1f-4d8a-4481-be30-c3d6999f874c
SIO_000300: 1
SIO_000628: feature:158587377-158587576:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 159085586..159085785
location: region:159085586-159085785:1
BFO_0000051: feature:159085586-159085785:1:region
SIO_000974: 11c8b9b8-6d3f-4e10-b2d6-b75be0bb920e

position:159085586:1
position: 159085586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:159085785:1
position: 159085785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

11c8b9b8-6d3f-4e10-b2d6-b75be0bb920e
SIO_000300: 1
SIO_000628: feature:159085586-159085785:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 159325179..159325378
location: region:159325179-159325378:1
BFO_0000051: feature:159325179-159325378:1:region
SIO_000974: 7a07c89b-90b7-49d3-af3a-8c771b424729

position:159325179:1
position: 159325179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:159325378:1
position: 159325378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

7a07c89b-90b7-49d3-af3a-8c771b424729
SIO_000300: 1
SIO_000628: feature:159325179-159325378:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 159358007..159358206
location: region:159358007-159358206:1
BFO_0000051: feature:159358007-159358206:1:region
SIO_000974: 43be8e6a-c35b-45f9-a84b-4c7fdeb6fa60

position:159358007:1
position: 159358007
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:159358206:1
position: 159358206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

43be8e6a-c35b-45f9-a84b-4c7fdeb6fa60
SIO_000300: 1
SIO_000628: feature:159358007-159358206:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 159571819..159572018
location: region:159571819-159572018:1
BFO_0000051: feature:159571819-159572018:1:region
SIO_000974: a16ba098-a727-4a02-8d22-0de8b96c3d65

position:159571819:1
position: 159571819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:159572018:1
position: 159572018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

a16ba098-a727-4a02-8d22-0de8b96c3d65
SIO_000300: 1
SIO_000628: feature:159571819-159572018:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 159677963..159678162
location: region:159677963-159678162:1
BFO_0000051: feature:159677963-159678162:1:region
SIO_000974: eb45d95f-7909-45ec-9492-635f1e608ed4

position:159677963:1
position: 159677963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:159678162:1
position: 159678162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

eb45d95f-7909-45ec-9492-635f1e608ed4
SIO_000300: 1
SIO_000628: feature:159677963-159678162:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 159897946..159898145
location: region:159897946-159898145:1
BFO_0000051: feature:159897946-159898145:1:region
SIO_000974: 5f49f7f8-50ea-47a3-b00e-8880fadf6902

position:159897946:1
position: 159897946
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:159898145:1
position: 159898145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

5f49f7f8-50ea-47a3-b00e-8880fadf6902
SIO_000300: 1
SIO_000628: feature:159897946-159898145:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 159955853..159956052
location: region:159955853-159956052:1
BFO_0000051: feature:159955853-159956052:1:region
SIO_000974: 6a38687b-f260-4d57-b040-cb0056325ad4

position:159955853:1
position: 159955853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:159956052:1
position: 159956052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

6a38687b-f260-4d57-b040-cb0056325ad4
SIO_000300: 1
SIO_000628: feature:159955853-159956052:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 160049879..160050078
location: region:160049879-160050078:1
BFO_0000051: feature:160049879-160050078:1:region
SIO_000974: 57cd999a-0e63-4300-a296-9ae8b0b8a2e2

position:160049879:1
position: 160049879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:160050078:1
position: 160050078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

57cd999a-0e63-4300-a296-9ae8b0b8a2e2
SIO_000300: 1
SIO_000628: feature:160049879-160050078:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 160075085..160075284
location: region:160075085-160075284:1
BFO_0000051: feature:160075085-160075284:1:region
SIO_000974: 2a911abd-d248-4260-99a1-6ce5724f8d98

position:160075085:1
position: 160075085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:160075284:1
position: 160075284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

2a911abd-d248-4260-99a1-6ce5724f8d98
SIO_000300: 1
SIO_000628: feature:160075085-160075284:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 160294380..160294579
location: region:160294380-160294579:1
BFO_0000051: feature:160294380-160294579:1:region
SIO_000974: 0c45e362-72c8-407c-a776-bcb6972df8b4

position:160294380:1
position: 160294380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:160294579:1
position: 160294579
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

0c45e362-72c8-407c-a776-bcb6972df8b4
SIO_000300: 1
SIO_000628: feature:160294380-160294579:1:region

Sthenelais limicola genome assembly, chromosome: 2.
type: Entry
definition: Sthenelais limicola genome assembly, chromosome: 2.
sequence version: OW804095.1
sequence date: 2022-05-17
sequence: sequence
division: INV
source: Sthenelais limicola
organism: Sthenelais limicola
taxonomy: Eukaryota; Metazoa; Spiralia; Lophotrochozoa; Annelida; Polychaeta; Errantia; Phyllodocida; Sigalionidae; Sthenelais.
reference: 1
comment: The assembly wpSthLimi1.1 is based on 45x PacBio data, 10X Genomics\nChromium data, and Arima2 Hi-C data generated by the Darwin Tree of\nLife\nProject (https://www.darwintreeoflife.org/). The assembly process\nincluded\nthe following sequence of steps: initial PacBio assembly generation\nwith\nHifiasm, retained haplotig separation with purge_dups, and Hi-C\nbased\nscaffolding with YaHS. The mitochondrial genome was assembled using\nMitoHiFi. Finally, the primary assembly was analysed and manually\nimproved\nusing gEVAL. Chromosome-scale scaffolds confirmed by the Hi-C data\nhave\nbeen named in order of size. Scaffold order and orientation is\nuncertain\nchromosome 6 0.39-8.86mb. Heterozygous inversion chromosome 7\n76.84-95.76mb.

sequence
subclass of: SO_0000001
sequence length: 156731404
topology: linear
RO_0000086: SO_0000987
location: 1..156731404
location: region:1-156731404:1
RO_0002162: 1210413

1
journal: Submitted (07-MAY-2022) to the INSDC. WELLCOME SANGER INSTITUTE, Tree of Life, Wellcome Genome Campus, Hinxton CB10 1SA, United Kingdom

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:156731404:1
position: 156731404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-156731404:1:source
BFO_0000050: sequence
organism: Sthenelais limicola
chromosome: 2
mol type: genomic DNA

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 335813..336012
location: region:335813-336012:1
BFO_0000051: feature:335813-336012:1:region
SIO_000974: 673a5ad0-fd15-40ed-a94e-d05bfba2752b

position:335813:1
position: 335813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:336012:1
position: 336012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

673a5ad0-fd15-40ed-a94e-d05bfba2752b
SIO_000300: 1
SIO_000628: feature:335813-336012:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 392744..392943
location: region:392744-392943:1
BFO_0000051: feature:392744-392943:1:region
SIO_000974: e3ddef07-5af8-4615-a258-1e2fec5e5390

position:392744:1
position: 392744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:392943:1
position: 392943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

e3ddef07-5af8-4615-a258-1e2fec5e5390
SIO_000300: 1
SIO_000628: feature:392744-392943:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 517911..518110
location: region:517911-518110:1
BFO_0000051: feature:517911-518110:1:region
SIO_000974: d532d2fc-f14c-4733-9d62-88f8060eb9a7

position:517911:1
position: 517911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:518110:1
position: 518110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

d532d2fc-f14c-4733-9d62-88f8060eb9a7
SIO_000300: 1
SIO_000628: feature:517911-518110:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 872061..872260
location: region:872061-872260:1
BFO_0000051: feature:872061-872260:1:region
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BFO_0000050: sequence
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SIO_000300: 1
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BFO_0000050: sequence
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SIO_000300: 1
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SIO_000300: 1
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SIO_000300: 1
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BFO_0000050: sequence
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SIO_000300: 1
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BFO_0000050: sequence
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SIO_000300: 1
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BFO_0000050: sequence
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SIO_000300: 1
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BFO_0000050: sequence
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SIO_000300: 1
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BFO_0000050: sequence
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SIO_000300: 1
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BFO_0000050: sequence
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BFO_0000050: sequence
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SIO_000300: 1
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BFO_0000050: sequence
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BFO_0000051: feature:10630407-10630606:1:region
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SIO_000300: 1
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BFO_0000050: sequence
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SIO_000300: 1
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BFO_0000050: sequence
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BFO_0000050: sequence
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SIO_000300: 1
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BFO_0000050: sequence
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SIO_000300: 1
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BFO_0000050: sequence
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SIO_000300: 1
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BFO_0000050: sequence
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SIO_000300: 1
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BFO_0000050: sequence
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BFO_0000050: sequence
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BFO_0000050: sequence
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BFO_0000050: sequence
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BFO_0000050: sequence
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SIO_000300: 1
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BFO_0000050: sequence
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SIO_000300: 1
SIO_000628: feature:17369028-17369227:1:region

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gap type: unknown
BFO_0000050: sequence
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SIO_000300: 1
SIO_000628: feature:17401154-17401353:1:region

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RO_0002162: 1210413
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gap type: unknown
BFO_0000050: sequence
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BFO_0000050: sequence
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SIO_000300: 1
SIO_000628: feature:37252009-37252208:1:region

assembly_gap
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RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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SIO_000628: feature:37403343-37403542:1:region

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BFO_0000050: sequence
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SIO_000628: feature:37632563-37632762:1:region

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BFO_0000050: sequence
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SIO_000300: 1
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BFO_0000050: sequence
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SIO_000628: feature:38988445-38988644:1:region

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SIO_000628: feature:39368021-39368220:1:region

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RO_0002162: 1210413
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BFO_0000050: sequence
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estimated length: 200
gap type: unknown
BFO_0000050: sequence
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SIO_000300: 1
SIO_000628: feature:39866073-39866272:1:region

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BFO_0000050: sequence
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SIO_000300: 1
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estimated length: 200
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BFO_0000050: sequence
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SIO_000628: feature:77832040-77832239:1:region

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BFO_0000050: sequence
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BFO_0000051: feature:146053166-146053365:1:region
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SIO_000300: 1
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RO_0002162: 1210413
estimated length: 200
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BFO_0000050: sequence
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BFO_0000051: feature:146114114-146114313:1:region
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SIO_000300: 1
SIO_000628: feature:146114114-146114313:1:region

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RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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SIO_000628: feature:146734972-146735171:1:region

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BFO_0000050: sequence
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BFO_0000051: feature:147709108-147709307:1:region
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SIO_000300: 1
SIO_000628: feature:147709108-147709307:1:region

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RO_0002162: 1210413
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BFO_0000050: sequence
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BFO_0000051: feature:147766872-147767071:1:region
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SIO_000628: feature:147766872-147767071:1:region

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BFO_0000050: sequence
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SIO_000300: 1
SIO_000628: feature:147917767-147917966:1:region

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RO_0002162: 1210413
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BFO_0000050: sequence
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BFO_0000051: feature:148226651-148226850:1:region
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SIO_000300: 1
SIO_000628: feature:148226651-148226850:1:region

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RO_0002162: 1210413
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gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:148325406-148325605:1:region
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SIO_000300: 1
SIO_000628: feature:148325406-148325605:1:region

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RO_0002162: 1210413
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BFO_0000050: sequence
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BFO_0000051: feature:149025507-149025706:1:region
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SIO_000300: 1
SIO_000628: feature:149025507-149025706:1:region

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BFO_0000050: sequence
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BFO_0000051: feature:149299281-149299480:1:region
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SIO_000300: 1
SIO_000628: feature:149299281-149299480:1:region

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estimated length: 200
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BFO_0000050: sequence
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SIO_000300: 1
SIO_000628: feature:150016600-150016799:1:region

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RO_0002162: 1210413
estimated length: 200
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BFO_0000050: sequence
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BFO_0000051: feature:153158639-153158838:1:region
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SIO_000300: 1
SIO_000628: feature:153158639-153158838:1:region

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estimated length: 200
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BFO_0000050: sequence
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BFO_0000051: feature:153216378-153216577:1:region
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SIO_000300: 1
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RO_0002162: 1210413
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BFO_0000050: sequence
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BFO_0000051: feature:153280317-153280516:1:region
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SIO_000300: 1
SIO_000628: feature:153280317-153280516:1:region

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BFO_0000050: sequence
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BFO_0000051: feature:153929065-153929264:1:region
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SIO_000300: 1
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BFO_0000050: sequence
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SIO_000300: 1
SIO_000628: feature:153983963-153984162:1:region

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RO_0002162: 1210413
estimated length: 200
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BFO_0000050: sequence
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gap type: unknown
BFO_0000050: sequence
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BFO_0000050: sequence
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SIO_000300: 1
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BFO_0000050: sequence
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BFO_0000051: feature:154319688-154319887:1:region
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reference: sequence
type: ForwardStrandPosition
type: ExactPosition

0eeee4c5-5b62-48db-aa54-5cec98bcfa7a
SIO_000300: 1
SIO_000628: feature:154319688-154319887:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 154438420..154438619
location: region:154438420-154438619:1
BFO_0000051: feature:154438420-154438619:1:region
SIO_000974: f0265f87-92f1-47d5-9b34-2289cc1bb752

position:154438420:1
position: 154438420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:154438619:1
position: 154438619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

f0265f87-92f1-47d5-9b34-2289cc1bb752
SIO_000300: 1
SIO_000628: feature:154438420-154438619:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 154528465..154528664
location: region:154528465-154528664:1
BFO_0000051: feature:154528465-154528664:1:region
SIO_000974: 65dd85c4-f750-414f-b76c-395471641b01

position:154528465:1
position: 154528465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:154528664:1
position: 154528664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

65dd85c4-f750-414f-b76c-395471641b01
SIO_000300: 1
SIO_000628: feature:154528465-154528664:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 154618336..154618535
location: region:154618336-154618535:1
BFO_0000051: feature:154618336-154618535:1:region
SIO_000974: 72351eaf-b3b1-43e1-bfae-587ae1f97b62

position:154618336:1
position: 154618336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:154618535:1
position: 154618535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

72351eaf-b3b1-43e1-bfae-587ae1f97b62
SIO_000300: 1
SIO_000628: feature:154618336-154618535:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 154778086..154778285
location: region:154778086-154778285:1
BFO_0000051: feature:154778086-154778285:1:region
SIO_000974: f872d4ae-14a7-420c-8fa1-bf3b4d54edfd

position:154778086:1
position: 154778086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:154778285:1
position: 154778285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

f872d4ae-14a7-420c-8fa1-bf3b4d54edfd
SIO_000300: 1
SIO_000628: feature:154778086-154778285:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 154809698..154809897
location: region:154809698-154809897:1
BFO_0000051: feature:154809698-154809897:1:region
SIO_000974: 85d97ab3-3505-4350-b245-b4efdea9c581

position:154809698:1
position: 154809698
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:154809897:1
position: 154809897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

85d97ab3-3505-4350-b245-b4efdea9c581
SIO_000300: 1
SIO_000628: feature:154809698-154809897:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 154833267..154833466
location: region:154833267-154833466:1
BFO_0000051: feature:154833267-154833466:1:region
SIO_000974: 3a6ad1b3-e48c-4c48-a57c-9a20fa47b75d

position:154833267:1
position: 154833267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:154833466:1
position: 154833466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

3a6ad1b3-e48c-4c48-a57c-9a20fa47b75d
SIO_000300: 1
SIO_000628: feature:154833267-154833466:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 154857303..154857502
location: region:154857303-154857502:1
BFO_0000051: feature:154857303-154857502:1:region
SIO_000974: ef086d88-9963-45bd-8d1f-8de53d3d8871

position:154857303:1
position: 154857303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:154857502:1
position: 154857502
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ef086d88-9963-45bd-8d1f-8de53d3d8871
SIO_000300: 1
SIO_000628: feature:154857303-154857502:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 154885847..154886046
location: region:154885847-154886046:1
BFO_0000051: feature:154885847-154886046:1:region
SIO_000974: c4e228ac-d109-4774-b39d-663030c08158

position:154885847:1
position: 154885847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:154886046:1
position: 154886046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

c4e228ac-d109-4774-b39d-663030c08158
SIO_000300: 1
SIO_000628: feature:154885847-154886046:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 154910034..154910233
location: region:154910034-154910233:1
BFO_0000051: feature:154910034-154910233:1:region
SIO_000974: 76784fdb-0b57-46fd-a2b1-8aa615d1499c

position:154910034:1
position: 154910034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:154910233:1
position: 154910233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

76784fdb-0b57-46fd-a2b1-8aa615d1499c
SIO_000300: 1
SIO_000628: feature:154910034-154910233:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 154932025..154932224
location: region:154932025-154932224:1
BFO_0000051: feature:154932025-154932224:1:region
SIO_000974: e3d7ef69-740e-4b91-aee4-396dfa2469ac

position:154932025:1
position: 154932025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:154932224:1
position: 154932224
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

e3d7ef69-740e-4b91-aee4-396dfa2469ac
SIO_000300: 1
SIO_000628: feature:154932025-154932224:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 154954468..154954667
location: region:154954468-154954667:1
BFO_0000051: feature:154954468-154954667:1:region
SIO_000974: 28a47d76-c8b5-486b-96a0-52fe68088181

position:154954468:1
position: 154954468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:154954667:1
position: 154954667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

28a47d76-c8b5-486b-96a0-52fe68088181
SIO_000300: 1
SIO_000628: feature:154954468-154954667:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 155252678..155252877
location: region:155252678-155252877:1
BFO_0000051: feature:155252678-155252877:1:region
SIO_000974: 478bbb57-7bc3-474a-aa8d-22432ce40e74

position:155252678:1
position: 155252678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:155252877:1
position: 155252877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

478bbb57-7bc3-474a-aa8d-22432ce40e74
SIO_000300: 1
SIO_000628: feature:155252678-155252877:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 155436718..155436917
location: region:155436718-155436917:1
BFO_0000051: feature:155436718-155436917:1:region
SIO_000974: 481c4fe8-f737-4139-83c6-f2561dc8d288

position:155436718:1
position: 155436718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:155436917:1
position: 155436917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

481c4fe8-f737-4139-83c6-f2561dc8d288
SIO_000300: 1
SIO_000628: feature:155436718-155436917:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 155458081..155458280
location: region:155458081-155458280:1
BFO_0000051: feature:155458081-155458280:1:region
SIO_000974: f482d5ce-7f04-4ec5-82b9-9481d0d3b718

position:155458081:1
position: 155458081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:155458280:1
position: 155458280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

f482d5ce-7f04-4ec5-82b9-9481d0d3b718
SIO_000300: 1
SIO_000628: feature:155458081-155458280:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 155495208..155495407
location: region:155495208-155495407:1
BFO_0000051: feature:155495208-155495407:1:region
SIO_000974: 1876e5c4-1f89-4764-87fd-ccfc44b6d20d

position:155495208:1
position: 155495208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:155495407:1
position: 155495407
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

1876e5c4-1f89-4764-87fd-ccfc44b6d20d
SIO_000300: 1
SIO_000628: feature:155495208-155495407:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 155524184..155524383
location: region:155524184-155524383:1
BFO_0000051: feature:155524184-155524383:1:region
SIO_000974: a3a29739-3f7a-4d2e-ad7b-a236afb37cdf

position:155524184:1
position: 155524184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:155524383:1
position: 155524383
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

a3a29739-3f7a-4d2e-ad7b-a236afb37cdf
SIO_000300: 1
SIO_000628: feature:155524184-155524383:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 155547701..155547900
location: region:155547701-155547900:1
BFO_0000051: feature:155547701-155547900:1:region
SIO_000974: 0f4d1b24-5a06-40bb-a24d-6e9dc9e3639b

position:155547701:1
position: 155547701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:155547900:1
position: 155547900
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

0f4d1b24-5a06-40bb-a24d-6e9dc9e3639b
SIO_000300: 1
SIO_000628: feature:155547701-155547900:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 155570527..155570726
location: region:155570527-155570726:1
BFO_0000051: feature:155570527-155570726:1:region
SIO_000974: f15732ce-cb56-48ea-b472-c2301aa98d53

position:155570527:1
position: 155570527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:155570726:1
position: 155570726
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

f15732ce-cb56-48ea-b472-c2301aa98d53
SIO_000300: 1
SIO_000628: feature:155570527-155570726:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 155595964..155596163
location: region:155595964-155596163:1
BFO_0000051: feature:155595964-155596163:1:region
SIO_000974: a94bd3af-44c2-435d-8357-f3720c9b1d15

position:155595964:1
position: 155595964
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:155596163:1
position: 155596163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

a94bd3af-44c2-435d-8357-f3720c9b1d15
SIO_000300: 1
SIO_000628: feature:155595964-155596163:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 156102788..156102987
location: region:156102788-156102987:1
BFO_0000051: feature:156102788-156102987:1:region
SIO_000974: 11b73ae3-7994-408d-b3da-ba879fc5a2c0

position:156102788:1
position: 156102788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:156102987:1
position: 156102987
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

11b73ae3-7994-408d-b3da-ba879fc5a2c0
SIO_000300: 1
SIO_000628: feature:156102788-156102987:1:region

Sthenelais limicola genome assembly, chromosome: 3.
type: Entry
definition: Sthenelais limicola genome assembly, chromosome: 3.
sequence version: OW804096.1
sequence date: 2022-05-17
sequence: sequence
division: INV
source: Sthenelais limicola
organism: Sthenelais limicola
taxonomy: Eukaryota; Metazoa; Spiralia; Lophotrochozoa; Annelida; Polychaeta; Errantia; Phyllodocida; Sigalionidae; Sthenelais.
reference: 1
comment: The assembly wpSthLimi1.1 is based on 45x PacBio data, 10X Genomics\nChromium data, and Arima2 Hi-C data generated by the Darwin Tree of\nLife\nProject (https://www.darwintreeoflife.org/). The assembly process\nincluded\nthe following sequence of steps: initial PacBio assembly generation\nwith\nHifiasm, retained haplotig separation with purge_dups, and Hi-C\nbased\nscaffolding with YaHS. The mitochondrial genome was assembled using\nMitoHiFi. Finally, the primary assembly was analysed and manually\nimproved\nusing gEVAL. Chromosome-scale scaffolds confirmed by the Hi-C data\nhave\nbeen named in order of size. Scaffold order and orientation is\nuncertain\nchromosome 6 0.39-8.86mb. Heterozygous inversion chromosome 7\n76.84-95.76mb.

sequence
subclass of: SO_0000001
sequence length: 150502382
topology: linear
RO_0000086: SO_0000987
location: 1..150502382
location: region:1-150502382:1
RO_0002162: 1210413

1
journal: Submitted (07-MAY-2022) to the INSDC. WELLCOME SANGER INSTITUTE, Tree of Life, Wellcome Genome Campus, Hinxton CB10 1SA, United Kingdom

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:150502382:1
position: 150502382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-150502382:1:source
BFO_0000050: sequence
organism: Sthenelais limicola
chromosome: 3
mol type: genomic DNA

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 986741..986940
location: region:986741-986940:1
BFO_0000051: feature:986741-986940:1:region
SIO_000974: 1907e612-d381-4657-806f-b3ee0f38e7bb

position:986741:1
position: 986741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:986940:1
position: 986940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

1907e612-d381-4657-806f-b3ee0f38e7bb
SIO_000300: 1
SIO_000628: feature:986741-986940:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 1426943..1427142
location: region:1426943-1427142:1
BFO_0000051: feature:1426943-1427142:1:region
SIO_000974: 588e6b87-c5ca-47c7-8c91-accf08d84749

position:1426943:1
position: 1426943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1427142:1
position: 1427142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

588e6b87-c5ca-47c7-8c91-accf08d84749
SIO_000300: 1
SIO_000628: feature:1426943-1427142:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 1801755..1801954
location: region:1801755-1801954:1
BFO_0000051: feature:1801755-1801954:1:region
SIO_000974: a1398fa7-da48-4d66-9650-5bd4105c5b95

position:1801755:1
position: 1801755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1801954:1
position: 1801954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

a1398fa7-da48-4d66-9650-5bd4105c5b95
SIO_000300: 1
SIO_000628: feature:1801755-1801954:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 1896138..1896337
location: region:1896138-1896337:1
BFO_0000051: feature:1896138-1896337:1:region
SIO_000974: 8955f0fb-0207-4897-9987-fc0787edecdf

position:1896138:1
position: 1896138
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1896337:1
position: 1896337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

8955f0fb-0207-4897-9987-fc0787edecdf
SIO_000300: 1
SIO_000628: feature:1896138-1896337:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 2199295..2199494
location: region:2199295-2199494:1
BFO_0000051: feature:2199295-2199494:1:region
SIO_000974: 08a25532-f329-430d-b53f-47328528a045

position:2199295:1
position: 2199295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2199494:1
position: 2199494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

08a25532-f329-430d-b53f-47328528a045
SIO_000300: 1
SIO_000628: feature:2199295-2199494:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 2327133..2327332
location: region:2327133-2327332:1
BFO_0000051: feature:2327133-2327332:1:region
SIO_000974: ea15f53a-db42-4504-b395-9ac1ed32649f

position:2327133:1
position: 2327133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2327332:1
position: 2327332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ea15f53a-db42-4504-b395-9ac1ed32649f
SIO_000300: 1
SIO_000628: feature:2327133-2327332:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 2974867..2975066
location: region:2974867-2975066:1
BFO_0000051: feature:2974867-2975066:1:region
SIO_000974: 899d7211-3f52-42e4-bb89-8c04cb7de653

position:2974867:1
position: 2974867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2975066:1
position: 2975066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

899d7211-3f52-42e4-bb89-8c04cb7de653
SIO_000300: 1
SIO_000628: feature:2974867-2975066:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 3029013..3029212
location: region:3029013-3029212:1
BFO_0000051: feature:3029013-3029212:1:region
SIO_000974: 7b3f926d-5db1-4ffc-92bc-0460573f45f9

position:3029013:1
position: 3029013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3029212:1
position: 3029212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

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SIO_000300: 1
SIO_000628: feature:3029013-3029212:1:region

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RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:3193273-3193472:1:region
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SIO_000300: 1
SIO_000628: feature:3193273-3193472:1:region

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RO_0002162: 1210413
estimated length: 200
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BFO_0000050: sequence
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BFO_0000051: feature:3674645-3674844:1:region
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SIO_000300: 1
SIO_000628: feature:3674645-3674844:1:region

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RO_0002162: 1210413
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BFO_0000050: sequence
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BFO_0000051: feature:3902609-3902808:1:region
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SIO_000300: 1
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gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:4281125-4281324:1:region
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SIO_000300: 1
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RO_0002162: 1210413
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BFO_0000050: sequence
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BFO_0000051: feature:4766576-4766775:1:region
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SIO_000300: 1
SIO_000628: feature:4766576-4766775:1:region

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BFO_0000050: sequence
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BFO_0000051: feature:5054173-5054372:1:region
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SIO_000300: 1
SIO_000628: feature:5054173-5054372:1:region

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estimated length: 200
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BFO_0000050: sequence
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BFO_0000051: feature:5179737-5179936:1:region
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SIO_000300: 1
SIO_000628: feature:5179737-5179936:1:region

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RO_0002162: 1210413
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BFO_0000050: sequence
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BFO_0000051: feature:5202452-5202651:1:region
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SIO_000300: 1
SIO_000628: feature:5202452-5202651:1:region

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estimated length: 200
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BFO_0000050: sequence
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BFO_0000051: feature:5232687-5232886:1:region
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SIO_000300: 1
SIO_000628: feature:5232687-5232886:1:region

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estimated length: 200
gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:5272168-5272367:1:region
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SIO_000300: 1
SIO_000628: feature:5272168-5272367:1:region

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RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:5409965-5410164:1:region
SIO_000974: dd3371c0-23c8-4300-8fb2-a846280d07c6

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SIO_000300: 1
SIO_000628: feature:5409965-5410164:1:region

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RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:5433346-5433545:1:region
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SIO_000300: 1
SIO_000628: feature:5433346-5433545:1:region

assembly_gap
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RO_0002162: 1210413
estimated length: 200
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BFO_0000050: sequence
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BFO_0000051: feature:5503264-5503463:1:region
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SIO_000300: 1
SIO_000628: feature:5503264-5503463:1:region

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BFO_0000050: sequence
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BFO_0000051: feature:5590073-5590272:1:region
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SIO_000300: 1
SIO_000628: feature:5590073-5590272:1:region

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RO_0002162: 1210413
estimated length: 200
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BFO_0000050: sequence
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BFO_0000051: feature:7569386-7569585:1:region
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SIO_000300: 1
SIO_000628: feature:7569386-7569585:1:region

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RO_0002162: 1210413
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gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:8360587-8360786:1:region
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SIO_000300: 1
SIO_000628: feature:8360587-8360786:1:region

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RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:9057279-9057478:1:region
SIO_000974: d63b32c3-b7c9-4f8d-ab72-418a083fe3c1

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SIO_000300: 1
SIO_000628: feature:9057279-9057478:1:region

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RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:9203865-9204064:1:region
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SIO_000300: 1
SIO_000628: feature:9203865-9204064:1:region

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RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:9417636-9417835:1:region
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SIO_000300: 1
SIO_000628: feature:9417636-9417835:1:region

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RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:9466683-9466882:1:region
SIO_000974: 6913c42e-8a48-4479-89f4-35c591ba7fd2

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reference: sequence
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SIO_000300: 1
SIO_000628: feature:9466683-9466882:1:region

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RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:9814171-9814370:1:region
SIO_000974: 82c06a96-cbf2-4139-84d6-4216cd112a6a

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reference: sequence
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SIO_000300: 1
SIO_000628: feature:9814171-9814370:1:region

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RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:10757388-10757587:1:region
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SIO_000300: 1
SIO_000628: feature:10757388-10757587:1:region

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RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:12210588-12210787:1:region
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SIO_000300: 1
SIO_000628: feature:12210588-12210787:1:region

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RO_0002162: 1210413
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BFO_0000050: sequence
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SIO_000300: 1
SIO_000628: feature:12861029-12861228:1:region

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RO_0002162: 1210413
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BFO_0000050: sequence
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BFO_0000051: feature:12948186-12948385:1:region
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SIO_000300: 1
SIO_000628: feature:12948186-12948385:1:region

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gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:13686506-13686705:1:region
SIO_000974: 41ed5694-ae78-48ab-8e48-570c902f2125

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SIO_000300: 1
SIO_000628: feature:13686506-13686705:1:region

assembly_gap
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gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:15209706-15209905:1:region
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SIO_000300: 1
SIO_000628: feature:15209706-15209905:1:region

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estimated length: 200
gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:15370585-15370784:1:region
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SIO_000300: 1
SIO_000628: feature:15370585-15370784:1:region

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RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:15392285-15392484:1:region
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SIO_000300: 1
SIO_000628: feature:15392285-15392484:1:region

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RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:15677462-15677661:1:region
SIO_000974: 0d7b2b00-cfec-4b56-af87-2fe3ecb4c322

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SIO_000300: 1
SIO_000628: feature:15677462-15677661:1:region

assembly_gap
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RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:16469766-16469965:1:region
SIO_000974: b91522f3-eba6-417d-90c6-3b5edcfc7f5e

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SIO_000300: 1
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assembly_gap
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RO_0002162: 1210413
estimated length: 200
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BFO_0000050: sequence
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SIO_000300: 1
SIO_000628: feature:16570398-16570597:1:region

assembly_gap
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BFO_0000050: sequence
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SIO_000300: 1
SIO_000628: feature:18121025-18121224:1:region

assembly_gap
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BFO_0000050: sequence
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BFO_0000051: feature:18214993-18215192:1:region
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SIO_000300: 1
SIO_000628: feature:18214993-18215192:1:region

assembly_gap
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BFO_0000050: sequence
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SIO_000300: 1
SIO_000628: feature:18285817-18286016:1:region

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gap type: unknown
BFO_0000050: sequence
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SIO_000628: feature:18318896-18319095:1:region

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estimated length: 200
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BFO_0000050: sequence
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BFO_0000051: feature:18353984-18354183:1:region
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SIO_000300: 1
SIO_000628: feature:18353984-18354183:1:region

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estimated length: 200
gap type: unknown
BFO_0000050: sequence
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SIO_000300: 1
SIO_000628: feature:18396815-18397014:1:region

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RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:19054359-19054558:1:region
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SIO_000300: 1
SIO_000628: feature:19054359-19054558:1:region

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RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:19314712-19314911:1:region
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SIO_000300: 1
SIO_000628: feature:19314712-19314911:1:region

assembly_gap
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RO_0002162: 1210413
estimated length: 200
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BFO_0000050: sequence
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BFO_0000051: feature:20309104-20309303:1:region
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SIO_000300: 1
SIO_000628: feature:20309104-20309303:1:region

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BFO_0000050: sequence
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BFO_0000051: feature:20656151-20656350:1:region
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SIO_000300: 1
SIO_000628: feature:20656151-20656350:1:region

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estimated length: 200
gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:20724473-20724672:1:region
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SIO_000300: 1
SIO_000628: feature:20724473-20724672:1:region

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gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:20897673-20897872:1:region
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SIO_000300: 1
SIO_000628: feature:20897673-20897872:1:region

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RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:20947314-20947513:1:region
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SIO_000300: 1
SIO_000628: feature:20947314-20947513:1:region

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estimated length: 200
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BFO_0000050: sequence
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BFO_0000051: feature:20972564-20972763:1:region
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reference: sequence
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SIO_000300: 1
SIO_000628: feature:20972564-20972763:1:region

assembly_gap
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RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:21191052-21191251:1:region
SIO_000974: f085c0d3-1d32-47a1-b60e-f0b31586e607

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SIO_000300: 1
SIO_000628: feature:21191052-21191251:1:region

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RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:21338345-21338544:1:region
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SIO_000300: 1
SIO_000628: feature:21338345-21338544:1:region

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RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:22090426-22090625:1:region
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SIO_000300: 1
SIO_000628: feature:22090426-22090625:1:region

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RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:24536822-24537021:1:region
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reference: sequence
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SIO_000300: 1
SIO_000628: feature:24536822-24537021:1:region

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RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:24823502-24823701:1:region
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SIO_000300: 1
SIO_000628: feature:24823502-24823701:1:region

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estimated length: 200
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BFO_0000050: sequence
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BFO_0000051: feature:27087645-27087844:1:region
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SIO_000300: 1
SIO_000628: feature:27087645-27087844:1:region

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BFO_0000050: sequence
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BFO_0000051: feature:31705808-31706007:1:region
SIO_000974: 9f977d0d-1c34-42c3-9d98-02715f5fa850

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SIO_000300: 1
SIO_000628: feature:31705808-31706007:1:region

assembly_gap
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RO_0002162: 1210413
estimated length: 200
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BFO_0000050: sequence
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BFO_0000051: feature:35940813-35941012:1:region
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SIO_000300: 1
SIO_000628: feature:35940813-35941012:1:region

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BFO_0000050: sequence
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BFO_0000051: feature:36207544-36207743:1:region
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SIO_000300: 1
SIO_000628: feature:36207544-36207743:1:region

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RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:50385692-50385891:1:region
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SIO_000300: 1
SIO_000628: feature:50385692-50385891:1:region

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BFO_0000050: sequence
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BFO_0000051: feature:65007414-65007613:1:region
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SIO_000300: 1
SIO_000628: feature:65007414-65007613:1:region

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BFO_0000050: sequence
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BFO_0000051: feature:78390503-78390702:1:region
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SIO_000300: 1
SIO_000628: feature:78390503-78390702:1:region

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RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:80745231-80745430:1:region
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SIO_000300: 1
SIO_000628: feature:80745231-80745430:1:region

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RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:85231268-85231467:1:region
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SIO_000300: 1
SIO_000628: feature:85231268-85231467:1:region

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RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:86903584-86903783:1:region
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SIO_000300: 1
SIO_000628: feature:86903584-86903783:1:region

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RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:91237792-91237991:1:region
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position:141317069:1
position: 141317069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

4312cba5-e7d1-4267-a0e1-7cc35e77f9b2
SIO_000300: 1
SIO_000628: feature:141316870-141317069:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 141573397..141573596
location: region:141573397-141573596:1
BFO_0000051: feature:141573397-141573596:1:region
SIO_000974: 6750b311-7720-476e-9fff-3c17aae82da1

position:141573397:1
position: 141573397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:141573596:1
position: 141573596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

6750b311-7720-476e-9fff-3c17aae82da1
SIO_000300: 1
SIO_000628: feature:141573397-141573596:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 141824751..141824950
location: region:141824751-141824950:1
BFO_0000051: feature:141824751-141824950:1:region
SIO_000974: 36bc9e26-4420-405f-b4ff-63206119b022

position:141824751:1
position: 141824751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:141824950:1
position: 141824950
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

36bc9e26-4420-405f-b4ff-63206119b022
SIO_000300: 1
SIO_000628: feature:141824751-141824950:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 142153145..142153344
location: region:142153145-142153344:1
BFO_0000051: feature:142153145-142153344:1:region
SIO_000974: a100f3d1-6975-48da-a549-068c9ebeb67c

position:142153145:1
position: 142153145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:142153344:1
position: 142153344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

a100f3d1-6975-48da-a549-068c9ebeb67c
SIO_000300: 1
SIO_000628: feature:142153145-142153344:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 142197421..142197620
location: region:142197421-142197620:1
BFO_0000051: feature:142197421-142197620:1:region
SIO_000974: 35fa8908-5450-4b62-a3f4-db883661f164

position:142197421:1
position: 142197421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:142197620:1
position: 142197620
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

35fa8908-5450-4b62-a3f4-db883661f164
SIO_000300: 1
SIO_000628: feature:142197421-142197620:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 142786224..142786423
location: region:142786224-142786423:1
BFO_0000051: feature:142786224-142786423:1:region
SIO_000974: 56c186da-c555-49ca-a68a-00ccf5b4f587

position:142786224:1
position: 142786224
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:142786423:1
position: 142786423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

56c186da-c555-49ca-a68a-00ccf5b4f587
SIO_000300: 1
SIO_000628: feature:142786224-142786423:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 143225840..143226039
location: region:143225840-143226039:1
BFO_0000051: feature:143225840-143226039:1:region
SIO_000974: 79ff9cee-d03e-42a5-bd56-6eea9f7e3bd8

position:143225840:1
position: 143225840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:143226039:1
position: 143226039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

79ff9cee-d03e-42a5-bd56-6eea9f7e3bd8
SIO_000300: 1
SIO_000628: feature:143225840-143226039:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 144903139..144903338
location: region:144903139-144903338:1
BFO_0000051: feature:144903139-144903338:1:region
SIO_000974: b3e71ac7-24f0-4937-9278-f16719323c43

position:144903139:1
position: 144903139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:144903338:1
position: 144903338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

b3e71ac7-24f0-4937-9278-f16719323c43
SIO_000300: 1
SIO_000628: feature:144903139-144903338:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 146862894..146863093
location: region:146862894-146863093:1
BFO_0000051: feature:146862894-146863093:1:region
SIO_000974: 37df9cda-58f4-4c84-b517-1630e4d31f25

position:146862894:1
position: 146862894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:146863093:1
position: 146863093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

37df9cda-58f4-4c84-b517-1630e4d31f25
SIO_000300: 1
SIO_000628: feature:146862894-146863093:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 146939989..146940188
location: region:146939989-146940188:1
BFO_0000051: feature:146939989-146940188:1:region
SIO_000974: 655075b4-e2d9-4de8-bec3-8649e65c2bc6

position:146939989:1
position: 146939989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:146940188:1
position: 146940188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

655075b4-e2d9-4de8-bec3-8649e65c2bc6
SIO_000300: 1
SIO_000628: feature:146939989-146940188:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 146960758..146960957
location: region:146960758-146960957:1
BFO_0000051: feature:146960758-146960957:1:region
SIO_000974: 195b0cbf-9de0-4907-a239-94490983a925

position:146960758:1
position: 146960758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:146960957:1
position: 146960957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

195b0cbf-9de0-4907-a239-94490983a925
SIO_000300: 1
SIO_000628: feature:146960758-146960957:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 147061873..147062072
location: region:147061873-147062072:1
BFO_0000051: feature:147061873-147062072:1:region
SIO_000974: e7c4e3fa-a0c7-4fc6-8530-b65f61091440

position:147061873:1
position: 147061873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:147062072:1
position: 147062072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

e7c4e3fa-a0c7-4fc6-8530-b65f61091440
SIO_000300: 1
SIO_000628: feature:147061873-147062072:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 147940651..147940850
location: region:147940651-147940850:1
BFO_0000051: feature:147940651-147940850:1:region
SIO_000974: c09ae861-13e3-48db-ba36-43da7f159b32

position:147940651:1
position: 147940651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:147940850:1
position: 147940850
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

c09ae861-13e3-48db-ba36-43da7f159b32
SIO_000300: 1
SIO_000628: feature:147940651-147940850:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 148172435..148172634
location: region:148172435-148172634:1
BFO_0000051: feature:148172435-148172634:1:region
SIO_000974: 530a13b4-bda5-4b36-a7cb-48f550604a58

position:148172435:1
position: 148172435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:148172634:1
position: 148172634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

530a13b4-bda5-4b36-a7cb-48f550604a58
SIO_000300: 1
SIO_000628: feature:148172435-148172634:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 148208388..148208587
location: region:148208388-148208587:1
BFO_0000051: feature:148208388-148208587:1:region
SIO_000974: f1437a38-e302-4602-80ae-b3baefc462c2

position:148208388:1
position: 148208388
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:148208587:1
position: 148208587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

f1437a38-e302-4602-80ae-b3baefc462c2
SIO_000300: 1
SIO_000628: feature:148208388-148208587:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 148255886..148256085
location: region:148255886-148256085:1
BFO_0000051: feature:148255886-148256085:1:region
SIO_000974: 800c6785-54e9-4561-837a-6135c2fb2be5

position:148255886:1
position: 148255886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:148256085:1
position: 148256085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

800c6785-54e9-4561-837a-6135c2fb2be5
SIO_000300: 1
SIO_000628: feature:148255886-148256085:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 148319131..148319330
location: region:148319131-148319330:1
BFO_0000051: feature:148319131-148319330:1:region
SIO_000974: 0179f3dd-a5dc-43a9-a650-80a11fc29ff6

position:148319131:1
position: 148319131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:148319330:1
position: 148319330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

0179f3dd-a5dc-43a9-a650-80a11fc29ff6
SIO_000300: 1
SIO_000628: feature:148319131-148319330:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 148648351..148648550
location: region:148648351-148648550:1
BFO_0000051: feature:148648351-148648550:1:region
SIO_000974: a6469dd6-2c11-415f-aa0e-65211ea0ef4b

position:148648351:1
position: 148648351
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:148648550:1
position: 148648550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

a6469dd6-2c11-415f-aa0e-65211ea0ef4b
SIO_000300: 1
SIO_000628: feature:148648351-148648550:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 148724356..148724555
location: region:148724356-148724555:1
BFO_0000051: feature:148724356-148724555:1:region
SIO_000974: b8d616a4-c9ac-4afd-8483-7d496edd6bff

position:148724356:1
position: 148724356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:148724555:1
position: 148724555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

b8d616a4-c9ac-4afd-8483-7d496edd6bff
SIO_000300: 1
SIO_000628: feature:148724356-148724555:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 148858677..148858876
location: region:148858677-148858876:1
BFO_0000051: feature:148858677-148858876:1:region
SIO_000974: 13e4e1b8-832e-4476-ba55-7784664bbcd2

position:148858677:1
position: 148858677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:148858876:1
position: 148858876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

13e4e1b8-832e-4476-ba55-7784664bbcd2
SIO_000300: 1
SIO_000628: feature:148858677-148858876:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 148918115..148918314
location: region:148918115-148918314:1
BFO_0000051: feature:148918115-148918314:1:region
SIO_000974: 3b9dfcd8-2ea5-4706-85e6-576c37e82d80

position:148918115:1
position: 148918115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:148918314:1
position: 148918314
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

3b9dfcd8-2ea5-4706-85e6-576c37e82d80
SIO_000300: 1
SIO_000628: feature:148918115-148918314:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 149106238..149106437
location: region:149106238-149106437:1
BFO_0000051: feature:149106238-149106437:1:region
SIO_000974: 747525de-217d-4287-97c4-7fd1138048b5

position:149106238:1
position: 149106238
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:149106437:1
position: 149106437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

747525de-217d-4287-97c4-7fd1138048b5
SIO_000300: 1
SIO_000628: feature:149106238-149106437:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 149353438..149353637
location: region:149353438-149353637:1
BFO_0000051: feature:149353438-149353637:1:region
SIO_000974: d1330bb3-54f7-45cb-804b-3ecfd467a3c7

position:149353438:1
position: 149353438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:149353637:1
position: 149353637
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

d1330bb3-54f7-45cb-804b-3ecfd467a3c7
SIO_000300: 1
SIO_000628: feature:149353438-149353637:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 149598881..149599080
location: region:149598881-149599080:1
BFO_0000051: feature:149598881-149599080:1:region
SIO_000974: 89712c13-0b3d-4148-a3de-5befaaec1146

position:149598881:1
position: 149598881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:149599080:1
position: 149599080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

89712c13-0b3d-4148-a3de-5befaaec1146
SIO_000300: 1
SIO_000628: feature:149598881-149599080:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 149723570..149723769
location: region:149723570-149723769:1
BFO_0000051: feature:149723570-149723769:1:region
SIO_000974: 22216d08-eeaf-4d80-a340-af271eab53be

position:149723570:1
position: 149723570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:149723769:1
position: 149723769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

22216d08-eeaf-4d80-a340-af271eab53be
SIO_000300: 1
SIO_000628: feature:149723570-149723769:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 149837319..149837518
location: region:149837319-149837518:1
BFO_0000051: feature:149837319-149837518:1:region
SIO_000974: 09bf43af-7b51-484f-a09c-e68deb0e368d

position:149837319:1
position: 149837319
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:149837518:1
position: 149837518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

09bf43af-7b51-484f-a09c-e68deb0e368d
SIO_000300: 1
SIO_000628: feature:149837319-149837518:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 150073911..150074110
location: region:150073911-150074110:1
BFO_0000051: feature:150073911-150074110:1:region
SIO_000974: 0110f71a-bf86-47d3-9dd8-cd6d5bc89034

position:150073911:1
position: 150073911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:150074110:1
position: 150074110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

0110f71a-bf86-47d3-9dd8-cd6d5bc89034
SIO_000300: 1
SIO_000628: feature:150073911-150074110:1:region

Sthenelais limicola genome assembly, chromosome: 4.
type: Entry
definition: Sthenelais limicola genome assembly, chromosome: 4.
sequence version: OW804097.1
sequence date: 2022-05-17
sequence: sequence
division: INV
source: Sthenelais limicola
organism: Sthenelais limicola
taxonomy: Eukaryota; Metazoa; Spiralia; Lophotrochozoa; Annelida; Polychaeta; Errantia; Phyllodocida; Sigalionidae; Sthenelais.
reference: 1
comment: The assembly wpSthLimi1.1 is based on 45x PacBio data, 10X Genomics\nChromium data, and Arima2 Hi-C data generated by the Darwin Tree of\nLife\nProject (https://www.darwintreeoflife.org/). The assembly process\nincluded\nthe following sequence of steps: initial PacBio assembly generation\nwith\nHifiasm, retained haplotig separation with purge_dups, and Hi-C\nbased\nscaffolding with YaHS. The mitochondrial genome was assembled using\nMitoHiFi. Finally, the primary assembly was analysed and manually\nimproved\nusing gEVAL. Chromosome-scale scaffolds confirmed by the Hi-C data\nhave\nbeen named in order of size. Scaffold order and orientation is\nuncertain\nchromosome 6 0.39-8.86mb. Heterozygous inversion chromosome 7\n76.84-95.76mb.

sequence
subclass of: SO_0000001
sequence length: 136979486
topology: linear
RO_0000086: SO_0000987
location: 1..136979486
location: region:1-136979486:1
RO_0002162: 1210413

1
journal: Submitted (07-MAY-2022) to the INSDC. WELLCOME SANGER INSTITUTE, Tree of Life, Wellcome Genome Campus, Hinxton CB10 1SA, United Kingdom

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:136979486:1
position: 136979486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-136979486:1:source
BFO_0000050: sequence
organism: Sthenelais limicola
chromosome: 4
mol type: genomic DNA

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 51784..51983
location: region:51784-51983:1
BFO_0000051: feature:51784-51983:1:region
SIO_000974: a61858da-34cc-4f77-84e3-8840baf2a016

position:51784:1
position: 51784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:51983:1
position: 51983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

a61858da-34cc-4f77-84e3-8840baf2a016
SIO_000300: 1
SIO_000628: feature:51784-51983:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 112780..112979
location: region:112780-112979:1
BFO_0000051: feature:112780-112979:1:region
SIO_000974: cf376b06-25b1-454e-b5e5-334c24036adf

position:112780:1
position: 112780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:112979:1
position: 112979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

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SIO_000300: 1
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SIO_000300: 1
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RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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SIO_000300: 1
SIO_000628: feature:28324935-28325134:1:region

assembly_gap
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RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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SIO_000628: feature:29943295-29943494:1:region

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RO_0002162: 1210413
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BFO_0000050: sequence
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BFO_0000050: sequence
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BFO_0000050: sequence
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BFO_0000050: sequence
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BFO_0000050: sequence
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RO_0002162: 1210413
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BFO_0000050: sequence
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RO_0002162: 1210413
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BFO_0000050: sequence
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BFO_0000050: sequence
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SIO_000628: feature:99930219-99930418:1:region

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RO_0002162: 1210413
estimated length: 200
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BFO_0000050: sequence
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SIO_000300: 1
SIO_000628: feature:109120382-109120581:1:region

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RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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BFO_0000051: feature:113552469-113552668:1:region
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SIO_000300: 1
SIO_000628: feature:113552469-113552668:1:region

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RO_0002162: 1210413
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BFO_0000050: sequence
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BFO_0000051: feature:114740065-114740264:1:region
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SIO_000300: 1
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RO_0002162: 1210413
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BFO_0000050: sequence
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SIO_000300: 1
SIO_000628: feature:115785286-115785485:1:region

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RO_0002162: 1210413
estimated length: 200
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BFO_0000050: sequence
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SIO_000628: feature:116217089-116217288:1:region

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RO_0002162: 1210413
estimated length: 200
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BFO_0000050: sequence
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BFO_0000051: feature:116323834-116324033:1:region
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SIO_000300: 1
SIO_000628: feature:116323834-116324033:1:region

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RO_0002162: 1210413
estimated length: 200
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BFO_0000050: sequence
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BFO_0000051: feature:117673813-117674012:1:region
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SIO_000300: 1
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BFO_0000050: sequence
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SIO_000300: 1
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RO_0002162: 1210413
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BFO_0000050: sequence
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SIO_000300: 1
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RO_0002162: 1210413
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BFO_0000050: sequence
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BFO_0000051: feature:124436393-124436592:1:region
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SIO_000300: 1
SIO_000628: feature:124436393-124436592:1:region

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RO_0002162: 1210413
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BFO_0000050: sequence
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BFO_0000051: feature:124458199-124458398:1:region
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SIO_000300: 1
SIO_000628: feature:124458199-124458398:1:region

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BFO_0000050: sequence
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BFO_0000050: sequence
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SIO_000300: 1
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BFO_0000050: sequence
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SIO_000300: 1
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BFO_0000050: sequence
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BFO_0000050: sequence
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BFO_0000050: sequence
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BFO_0000050: sequence
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gap type: unknown
BFO_0000050: sequence
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estimated length: 200
gap type: unknown
BFO_0000050: sequence
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SIO_000300: 1
SIO_000628: feature:132394963-132395162:1:region

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gap type: unknown
BFO_0000050: sequence
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location: region:132689840-132690039:1
BFO_0000051: feature:132689840-132690039:1:region
SIO_000974: e6e0bd1b-91cf-43fb-8a23-e74ff9eea18e

position:132689840:1
position: 132689840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:132690039:1
position: 132690039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

e6e0bd1b-91cf-43fb-8a23-e74ff9eea18e
SIO_000300: 1
SIO_000628: feature:132689840-132690039:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 132852749..132852948
location: region:132852749-132852948:1
BFO_0000051: feature:132852749-132852948:1:region
SIO_000974: c0f20642-1b71-48ac-8704-a921a2f83389

position:132852749:1
position: 132852749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:132852948:1
position: 132852948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

c0f20642-1b71-48ac-8704-a921a2f83389
SIO_000300: 1
SIO_000628: feature:132852749-132852948:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 132953028..132953227
location: region:132953028-132953227:1
BFO_0000051: feature:132953028-132953227:1:region
SIO_000974: 8d6d7b7c-42fa-49b6-92fd-cc6594a22507

position:132953028:1
position: 132953028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:132953227:1
position: 132953227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

8d6d7b7c-42fa-49b6-92fd-cc6594a22507
SIO_000300: 1
SIO_000628: feature:132953028-132953227:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 133149809..133150008
location: region:133149809-133150008:1
BFO_0000051: feature:133149809-133150008:1:region
SIO_000974: 9e72d373-495b-4d50-8ca4-550c4e6e7482

position:133149809:1
position: 133149809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:133150008:1
position: 133150008
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

9e72d373-495b-4d50-8ca4-550c4e6e7482
SIO_000300: 1
SIO_000628: feature:133149809-133150008:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 133397219..133397418
location: region:133397219-133397418:1
BFO_0000051: feature:133397219-133397418:1:region
SIO_000974: f4f5dd86-1b6f-449a-a5b7-f97e01e12fb5

position:133397219:1
position: 133397219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:133397418:1
position: 133397418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

f4f5dd86-1b6f-449a-a5b7-f97e01e12fb5
SIO_000300: 1
SIO_000628: feature:133397219-133397418:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 133529204..133529403
location: region:133529204-133529403:1
BFO_0000051: feature:133529204-133529403:1:region
SIO_000974: 9a5344e0-0427-4ff1-8a5d-e9e76aad6dbf

position:133529204:1
position: 133529204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:133529403:1
position: 133529403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

9a5344e0-0427-4ff1-8a5d-e9e76aad6dbf
SIO_000300: 1
SIO_000628: feature:133529204-133529403:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 133705379..133705578
location: region:133705379-133705578:1
BFO_0000051: feature:133705379-133705578:1:region
SIO_000974: dbdf7c41-d8f1-44b2-8f5d-7e109bba11d4

position:133705379:1
position: 133705379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:133705578:1
position: 133705578
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

dbdf7c41-d8f1-44b2-8f5d-7e109bba11d4
SIO_000300: 1
SIO_000628: feature:133705379-133705578:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 133854756..133854955
location: region:133854756-133854955:1
BFO_0000051: feature:133854756-133854955:1:region
SIO_000974: 5386a385-c7e7-41c2-b463-174a0b4fd220

position:133854756:1
position: 133854756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:133854955:1
position: 133854955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

5386a385-c7e7-41c2-b463-174a0b4fd220
SIO_000300: 1
SIO_000628: feature:133854756-133854955:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 133949076..133949275
location: region:133949076-133949275:1
BFO_0000051: feature:133949076-133949275:1:region
SIO_000974: 79f7602c-526e-45cb-a3a6-86476501c3f0

position:133949076:1
position: 133949076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:133949275:1
position: 133949275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

79f7602c-526e-45cb-a3a6-86476501c3f0
SIO_000300: 1
SIO_000628: feature:133949076-133949275:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 134528069..134528268
location: region:134528069-134528268:1
BFO_0000051: feature:134528069-134528268:1:region
SIO_000974: 3bd3cca6-54c9-4861-95e3-daf9b2d62e94

position:134528069:1
position: 134528069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:134528268:1
position: 134528268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

3bd3cca6-54c9-4861-95e3-daf9b2d62e94
SIO_000300: 1
SIO_000628: feature:134528069-134528268:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 134872999..134873198
location: region:134872999-134873198:1
BFO_0000051: feature:134872999-134873198:1:region
SIO_000974: 0155f8fe-9463-4596-b073-6855f20ff1d0

position:134872999:1
position: 134872999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:134873198:1
position: 134873198
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

0155f8fe-9463-4596-b073-6855f20ff1d0
SIO_000300: 1
SIO_000628: feature:134872999-134873198:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 135942431..135942630
location: region:135942431-135942630:1
BFO_0000051: feature:135942431-135942630:1:region
SIO_000974: 298133d2-ec0a-4503-807e-e34776e28f5a

position:135942431:1
position: 135942431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:135942630:1
position: 135942630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

298133d2-ec0a-4503-807e-e34776e28f5a
SIO_000300: 1
SIO_000628: feature:135942431-135942630:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 136693102..136693301
location: region:136693102-136693301:1
BFO_0000051: feature:136693102-136693301:1:region
SIO_000974: 130f86ee-14b4-43be-b9b6-dd2f0daf2f1a

position:136693102:1
position: 136693102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:136693301:1
position: 136693301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

130f86ee-14b4-43be-b9b6-dd2f0daf2f1a
SIO_000300: 1
SIO_000628: feature:136693102-136693301:1:region

Sthenelais limicola genome assembly, chromosome: 5.
type: Entry
definition: Sthenelais limicola genome assembly, chromosome: 5.
sequence version: OW804098.1
sequence date: 2022-05-17
sequence: sequence
division: INV
source: Sthenelais limicola
organism: Sthenelais limicola
taxonomy: Eukaryota; Metazoa; Spiralia; Lophotrochozoa; Annelida; Polychaeta; Errantia; Phyllodocida; Sigalionidae; Sthenelais.
reference: 1
comment: The assembly wpSthLimi1.1 is based on 45x PacBio data, 10X Genomics\nChromium data, and Arima2 Hi-C data generated by the Darwin Tree of\nLife\nProject (https://www.darwintreeoflife.org/). The assembly process\nincluded\nthe following sequence of steps: initial PacBio assembly generation\nwith\nHifiasm, retained haplotig separation with purge_dups, and Hi-C\nbased\nscaffolding with YaHS. The mitochondrial genome was assembled using\nMitoHiFi. Finally, the primary assembly was analysed and manually\nimproved\nusing gEVAL. Chromosome-scale scaffolds confirmed by the Hi-C data\nhave\nbeen named in order of size. Scaffold order and orientation is\nuncertain\nchromosome 6 0.39-8.86mb. Heterozygous inversion chromosome 7\n76.84-95.76mb.

sequence
subclass of: SO_0000001
sequence length: 130190318
topology: linear
RO_0000086: SO_0000987
location: 1..130190318
location: region:1-130190318:1
RO_0002162: 1210413

1
journal: Submitted (07-MAY-2022) to the INSDC. WELLCOME SANGER INSTITUTE, Tree of Life, Wellcome Genome Campus, Hinxton CB10 1SA, United Kingdom

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:130190318:1
position: 130190318
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-130190318:1:source
BFO_0000050: sequence
organism: Sthenelais limicola
chromosome: 5
mol type: genomic DNA

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 338224..338423
location: region:338224-338423:1
BFO_0000051: feature:338224-338423:1:region
SIO_000974: 84564335-e047-4f40-90a0-517781487468

position:338224:1
position: 338224
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:338423:1
position: 338423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

84564335-e047-4f40-90a0-517781487468
SIO_000300: 1
SIO_000628: feature:338224-338423:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 398347..398546
location: region:398347-398546:1
BFO_0000051: feature:398347-398546:1:region
SIO_000974: 8b47cb3a-adbe-41f7-9fae-11f7ef441b0a

position:398347:1
position: 398347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:398546:1
position: 398546
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

8b47cb3a-adbe-41f7-9fae-11f7ef441b0a
SIO_000300: 1
SIO_000628: feature:398347-398546:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 473126..473325
location: region:473126-473325:1
BFO_0000051: feature:473126-473325:1:region
SIO_000974: d866f896-be04-4671-a360-1dbcc73b0814

position:473126:1
position: 473126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:473325:1
position: 473325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

d866f896-be04-4671-a360-1dbcc73b0814
SIO_000300: 1
SIO_000628: feature:473126-473325:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 675679..675878
location: region:675679-675878:1
BFO_0000051: feature:675679-675878:1:region
SIO_000974: 5c6a0822-018f-4b4a-aff0-3835b7de9ed8

position:675679:1
position: 675679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:675878:1
position: 675878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

5c6a0822-018f-4b4a-aff0-3835b7de9ed8
SIO_000300: 1
SIO_000628: feature:675679-675878:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 802538..802737
location: region:802538-802737:1
BFO_0000051: feature:802538-802737:1:region
SIO_000974: fa0bc713-6ea8-4f2f-861c-cc6b7f13f6ae

position:802538:1
position: 802538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:802737:1
position: 802737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

fa0bc713-6ea8-4f2f-861c-cc6b7f13f6ae
SIO_000300: 1
SIO_000628: feature:802538-802737:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 905524..905723
location: region:905524-905723:1
BFO_0000051: feature:905524-905723:1:region
SIO_000974: f490686f-ba3e-4500-8a49-f1ed8c61b260

position:905524:1
position: 905524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:905723:1
position: 905723
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

f490686f-ba3e-4500-8a49-f1ed8c61b260
SIO_000300: 1
SIO_000628: feature:905524-905723:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 1012039..1012238
location: region:1012039-1012238:1
BFO_0000051: feature:1012039-1012238:1:region
SIO_000974: df56222a-3643-47cb-880e-88628bf710b3

position:1012039:1
position: 1012039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1012238:1
position: 1012238
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

df56222a-3643-47cb-880e-88628bf710b3
SIO_000300: 1
SIO_000628: feature:1012039-1012238:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 1402183..1402382
location: region:1402183-1402382:1
BFO_0000051: feature:1402183-1402382:1:region
SIO_000974: fc5e51b1-a7c3-4ae0-9abf-05d5b7339651

position:1402183:1
position: 1402183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1402382:1
position: 1402382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

fc5e51b1-a7c3-4ae0-9abf-05d5b7339651
SIO_000300: 1
SIO_000628: feature:1402183-1402382:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 2617992..2618191
location: region:2617992-2618191:1
BFO_0000051: feature:2617992-2618191:1:region
SIO_000974: 64c93061-b39a-4ec5-9a94-d9ab06f7d7b6

position:2617992:1
position: 2617992
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2618191:1
position: 2618191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

64c93061-b39a-4ec5-9a94-d9ab06f7d7b6
SIO_000300: 1
SIO_000628: feature:2617992-2618191:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 2647929..2648128
location: region:2647929-2648128:1
BFO_0000051: feature:2647929-2648128:1:region
SIO_000974: e61734c0-9f86-4e65-8f08-98ad95236d98

position:2647929:1
position: 2647929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2648128:1
position: 2648128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

e61734c0-9f86-4e65-8f08-98ad95236d98
SIO_000300: 1
SIO_000628: feature:2647929-2648128:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 3526033..3526232
location: region:3526033-3526232:1
BFO_0000051: feature:3526033-3526232:1:region
SIO_000974: 3aa49010-632b-442c-83a5-0dc47fed6b7b

position:3526033:1
position: 3526033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3526232:1
position: 3526232
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

3aa49010-632b-442c-83a5-0dc47fed6b7b
SIO_000300: 1
SIO_000628: feature:3526033-3526232:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 3552069..3552268
location: region:3552069-3552268:1
BFO_0000051: feature:3552069-3552268:1:region
SIO_000974: e607eed8-d06c-4503-a0ac-1468de2cda51

position:3552069:1
position: 3552069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3552268:1
position: 3552268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

e607eed8-d06c-4503-a0ac-1468de2cda51
SIO_000300: 1
SIO_000628: feature:3552069-3552268:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 4253805..4254004
location: region:4253805-4254004:1
BFO_0000051: feature:4253805-4254004:1:region
SIO_000974: ba6c0efb-70b5-40ac-a4ce-c66d49ecd3c1

position:4253805:1
position: 4253805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4254004:1
position: 4254004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ba6c0efb-70b5-40ac-a4ce-c66d49ecd3c1
SIO_000300: 1
SIO_000628: feature:4253805-4254004:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 4323083..4323282
location: region:4323083-4323282:1
BFO_0000051: feature:4323083-4323282:1:region
SIO_000974: afb2837b-e3a0-4756-9b20-71345232933b

position:4323083:1
position: 4323083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4323282:1
position: 4323282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

afb2837b-e3a0-4756-9b20-71345232933b
SIO_000300: 1
SIO_000628: feature:4323083-4323282:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 4367072..4367271
location: region:4367072-4367271:1
BFO_0000051: feature:4367072-4367271:1:region
SIO_000974: 8c9c659a-79aa-4ec7-98f5-2e7a59106c8e

position:4367072:1
position: 4367072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4367271:1
position: 4367271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

8c9c659a-79aa-4ec7-98f5-2e7a59106c8e
SIO_000300: 1
SIO_000628: feature:4367072-4367271:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
location: 4391262..4391461
location: region:4391262-4391461:1
BFO_0000051: feature:4391262-4391461:1:region
SIO_000974: 3266df18-dc3f-4a78-9dc0-2d095df11ec0

position:4391262:1
position: 4391262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4391461:1
position: 4391461
reference: sequence
type: ForwardStrandPosition
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SIO_000300: 1
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SIO_000300: 1
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SIO_000300: 1
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BFO_0000050: sequence
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SIO_000300: 1
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SIO_000300: 1
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BFO_0000050: sequence
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SIO_000300: 1
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BFO_0000050: sequence
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SIO_000300: 1
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SIO_000300: 1
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BFO_0000050: sequence
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SIO_000300: 1
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BFO_0000050: sequence
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SIO_000300: 1
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BFO_0000050: sequence
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SIO_000300: 1
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BFO_0000050: sequence
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SIO_000300: 1
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BFO_0000050: sequence
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BFO_0000050: sequence
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BFO_0000050: sequence
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SIO_000300: 1
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BFO_0000050: sequence
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SIO_000300: 1
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BFO_0000050: sequence
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BFO_0000050: sequence
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BFO_0000050: sequence
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SIO_000300: 1
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BFO_0000050: sequence
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BFO_0000050: sequence
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SIO_000300: 1
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BFO_0000050: sequence
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assembly_gap
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RO_0002162: 1210413
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BFO_0000050: sequence
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SIO_000300: 1
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assembly_gap
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BFO_0000050: sequence
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SIO_000300: 1
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assembly_gap
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assembly_gap
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BFO_0000050: sequence
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SIO_000300: 1
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assembly_gap
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BFO_0000050: sequence
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SIO_000300: 1
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BFO_0000050: sequence
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SIO_000300: 1
SIO_000628: feature:126533784-126533983:1:region

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BFO_0000050: sequence
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SIO_000300: 1
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assembly_gap
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RO_0002162: 1210413
estimated length: 200
gap type: unknown
BFO_0000050: sequence
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SIO_000300: 1
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assembly_gap
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estimated length: 200
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BFO_0000050: sequence
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SIO_000300: 1
SIO_000628: feature:127028902-127029101:1:region

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BFO_0000050: sequence
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BFO_0000051: feature:127063579-127063778:1:region
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SIO_000300: 1
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assembly_gap
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RO_0002162: 1210413
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BFO_0000050: sequence
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BFO_0000051: feature:127311099-127311298:1:region
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SIO_000300: 1
SIO_000628: feature:127311099-127311298:1:region

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BFO_0000050: sequence
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BFO_0000051: feature:127377176-127377375:1:region
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BFO_0000050: sequence
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SIO_000300: 1
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gap type: unknown
BFO_0000050: sequence
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gap type: unknown
BFO_0000050: sequence
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SIO_000300: 1
SIO_000628: feature:127566163-127566362:1:region

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BFO_0000050: sequence
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BFO_0000051: feature:127830814-127831013:1:region
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SIO_000300: 1
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BFO_0000050: sequence
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BFO_0000050: sequence
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SIO_000300: 1
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gap type: unknown
BFO_0000050: sequence
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BFO_0000050: sequence
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estimated length: 200
gap type: unknown
BFO_0000050: sequence
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