home > bioproject > PRJDB11962
identifier PRJDB11962
type bioproject
sameAs
organism Oryzias latipes
title Developmental transcriptome of Japanese medaka embryos (inbred and wild strains)
description What nature of embryogenesis underlies the evolutionary conservation of phenotypes still remains elusive. Here, the contribution of developmental canalization to the conservation of body plan establishing period was examined. We quantified the intra-species phenotypic conservation and the strength of developmental canalization using transcriptomic data of medaka (O. latipes) embryos at various developmental stages (st.15, st.23.5, st.28, Hatching). For intra-species phenotypic conservation, differences in gene expression profile among wild strains (Kasasa and Oura strains) were measured. For developmental canalization, differences in gene expression profiles were quantified between twin inbred embryos as an approximation of identical genetic backgrounds. We found that the most conserved developmental period among vertebrates, also known as the body plan establishing period (st.23.5 and st.28, here), exhibited the highest intra-species conservation and the strongest canalization during development. This raised a possibility that developmental canalization may contribute to the evolutionary conservation of body plan establishing developmental process.
data type Transcriptome or Gene Expression
publication
properties 
{...}
dbXrefs
sra-run  DRR308999DRR309000DRR309001DRR309002DRR309003DRR309004DRR309005DRR309006DRR309007DRR309008 More
sra-submission  DRA012427
biosample  SAMD00392355SAMD00392356SAMD00392357SAMD00392358SAMD00392359SAMD00392360SAMD00392361SAMD00392362SAMD00392363SAMD00392364 More
sra-study  DRP008256
sra-sample  DRS229969DRS229970DRS229971DRS229972DRS229973DRS229974DRS229975DRS229976DRS229977DRS229978 More
sra-experiment  DRX298419DRX298420DRX298421DRX298422DRX298423DRX298424DRX298425DRX298426DRX298427DRX298428 More
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status public
visibility unrestricted-access
dateCreated 2021-07-06T07:36:33+09:00
dateModified 2022-03-04T14:14:32+09:00
datePublished 2022-03-04T14:14:26+09:00