home > bioproject > PRJDB1903
identifier PRJDB1903
type bioproject
sra-study  DRP000442
organism Homo sapiens
title Whole exome analysis of myelodysplastic syndromes
description Whole exome analysis was performed for 29 MDS (myelodysplastic syndromes) samples, where entire exon sequences were enriched by using SureSelect Human All Exon kit (Agilent Technologies) and were subjected to resequencing analysis using Genome Analizer IIx (Illumina). More than 60% of mapped reads contained exon sequences. > 80% of exons were sequenced at the depth of >20 with average fold-coverage of >50 times. Given that the constitutive genomic DNA was difficult to obtain in MDS patients, paired CD3-positive T cells were used as a normal control. none provided
data type DDBJ SRA Study
external link
sra-run  DRR001242DRR001243DRR001244DRR001245DRR001246DRR001247DRR001248DRR001249DRR001250DRR001251 More
sra-submission  DRA000433
biosample  SAMD00003436SAMD00003414SAMD00003434SAMD00003428SAMD00003415SAMD00003422SAMD00003409SAMD00003427SAMD00003435SAMD00003429 More
sra-study  DRP000442
sra-sample  DRS000810DRS000821DRS000814DRS000798DRS000822DRS000799DRS000815DRS000800DRS000819DRS000816 More
sra-experiment  DRX000867DRX000868DRX000913DRX000914DRX000889DRX000890DRX000875DRX000876DRX000843DRX000844 More
distribution JSONJSON-LD
status public
visibility unrestricted-access
dateCreated 2014-05-12T00:46:27+0000
dateModified 2014-05-12T00:46:27+0000
datePublished 2014-05-12T00:46:27+0000