home > bioproject > PRJDB2460
identifier PRJDB2460
type bioproject
sra-study  DRP000633
organism Gnathopogon caerulescens x Gnathopogon elongatus
title A RAD-based linkage map for QTL analysis and comparative genomics in the gudgeons (genus Gnathopogon, Cyprinidae)
description The construction of linkage maps is a first step to explore genetic basis for adaptive phenotypic divergence in closely related species by quantitative trait locus (QTL) analysis, and useful for the comparative genomics in non-model organisms. Advances in genomics technologies make it more feasible than ever to study genetics of adaptation in natural populations. Restriction-site associated DNA (RAD) sequencing on next-generation sequencers facilitates a development of a large number of genetic markers and genotyping. To elucidate the genetic architecture underlying phenotypic diversification in relation to the use of the limnetic niches of the gudgeons of the genus Gnathopogon (Cyprinidae), we aimed at constructing a linkage map of these freshwater fishes for QTL analysis and comparative genomics with the zebrafish Danio rerio belonging to the same family as gudgeons.
data type DDBJ SRA Study
external link
sra-run  DRR002372DRR002373DRR002374DRR002375DRR002376DRR002377DRR002378DRR002379
sra-submission  DRA000602
biosample  SAMD00011965SAMD00011949SAMD00012086SAMD00011975
sra-study  DRP000633
sra-sample  DRS001670DRS001721DRS001772DRS001823
sra-experiment  DRX001781DRX001782DRX001783DRX001784DRX001785DRX001786DRX001787DRX001788
distribution JSONJSON-LD
status public
visibility unrestricted-access
dateCreated 2014-05-12T00:46:27+0000
dateModified 2014-05-12T00:46:27+0000
datePublished 2014-05-12T00:46:27+0000