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identifier PRJDB2846
type bioproject
sra-study  DRP000424
organism Pseudomonas fluorescens Pf0-1
title DNA rearrangement occurred on the carbazole degradative plasmid pCAR1 and the chromosome of its inappropriate host Pseudomonas fluorescens Pf0-1
description pCAR1 is a carbazole(nitrogen-containing aromatic compound)-degradative plasmid. In our previous study, DNA rearrangements on pCAR1 were frequently detected in the host Pseudomonas fluorescens Pf0-1 in the presence of carbazole. Several Pf0-1 mutants harbouring pCAR1 were isolated. Here, we compared genome sequences of the parent strain Pf0-1L(pCAR1::rfp_Pf) and one of its mutants, 5EP83, to assess whether other DNA rearrangements occurred in either the plasmid or the host chromosome. none provided
data type DDBJ SRA Study
external link
sra-run  DRR001171DRR001172
sra-submission  DRA000416
biosample  SAMD00016706SAMD00016707
sra-study  DRP000424
sra-sample  DRS000728DRS000729
sra-experiment  DRX000768DRX000769
distribution JSONJSON-LD
status public
visibility unrestricted-access
dateCreated 2014-05-12T00:46:27+0000
dateModified 2014-05-12T00:46:27+0000
datePublished 2014-05-12T00:46:27+0000