home > bioproject > PRJDB3044
identifier PRJDB3044
type bioproject
sameAs
organism Rattus norvegicus
title IDENTIFICATION OF UNIQUE HISTONE MODIFICATION IN SLOW SKELETAL MUSCLE OF RATS
description Skeletal muscle is classified into fast and slow characteristics. Although numerous studies reported the adaptation and transformation of muscle properties and phenotype in response to various stimuli, such as exercise, unloading and gene mutation models, the differences of the epigenetic background in these muscle types were unclear. Here, we demonstrate the major differences of histone modifications in fast plantaris and slow soleus of adult rats. Genome-wide ChIP-seq analysis revealed that transcriptionally active histone marks, tri-methylation at lysine 4 and acetylation of histone 3, were less mapped at the genes activated specially in slow soleus, whereas the transcription of fast muscle-specific genes associated with these active histone marks in fast plantaris.
data type Epigenomics
publication
properties 
{...}
dbXrefs
sra-run  DRR022276DRR022277DRR022278DRR022279DRR022280DRR022281DRR022282DRR022283DRR022284DRR022285
sra-submission  DRA002441
biosample  SAMD00019156
sra-study  DRP003157
sra-sample  DRS031111
sra-experiment  DRX020375DRX020376DRX020377DRX020378DRX020379DRX020380DRX020381DRX020382DRX020383DRX020384
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status public
visibility unrestricted-access
dateCreated 2014-08-12T00:36:24+09:00
dateModified 2016-06-14T13:10:11+09:00
datePublished 2016-06-14T13:10:09+09:00