home > bioproject > PRJDB3161
identifier PRJDB3161
type bioproject
sameAs
organism gut metagenome
title Fecal analysis in gnotobiotic mice gnotobiotic mice harboring 15 predominant species of human gut microbiota
description We performed metatranscriptomics in feces of gnotobiotic mice and 16S-metagenomics in feces of gnotobiotic mice. The 15 predominant species consisted of Bacteroides caccae JCM9498, Bacteroides ovatus JCM5824, Bacteroides thetaiotaomicron JCM5827, Bacteroides uniformis JCM5828, Bacteroides vulgatus JCM5826, Bacteroides cellulosilyticus JCM15632, Clostridium scindens JCM6567, Clostridium spiroforme JCM1432, Collinsella aerofaciens JCM10188, Dorea longicatena DSM 13814, Eubacterium rectale ATCC 33656, Faecalibacterium prausnitzii DSM17677, Parabacteroides distasonis JCM5825, Ruminococcus obeum ATCC 29174, Ruminococcus torques ATCC 27756. And phosphate-buffered saline or B. longum BB536 suspension in PBS were administered to mice harboring 15 predominant species of human gut microbiota.
data type Targeted Locus (Loci)
publication
properties 
{...}
dbXrefs
sra-run  DRR023155DRR023156DRR023157DRR023158DRR023159DRR023160DRR023161DRR023162DRR023163DRR023164 More
sra-submission  DRA002536
biosample  SAMD00020234SAMD00020235SAMD00020236SAMD00020237SAMD00020238SAMD00020239SAMD00020240SAMD00020241SAMD00020242SAMD00020243 More
sra-study  DRP002681
sra-sample  DRS019855DRS019856DRS019857DRS019858DRS019859DRS019860DRS019861DRS019862DRS019863DRS019864 More
sra-experiment  DRX021209DRX021210DRX021211DRX021212DRX021213DRX021214DRX021215DRX021216DRX021217DRX021218 More
distribution JSONJSON-LD
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status public
visibility unrestricted-access
dateCreated 2014-09-22T15:28:51+09:00
dateModified 2015-06-11T00:21:46+09:00
datePublished 2015-06-11T00:21:46+09:00