home > bioproject > PRJDB3195
identifier PRJDB3195
type bioproject
sameAs
organism Rhizophagus irregularis DAOM 181602
title Transcriptome analysis in Rhizophagus irregularis
description To identify differentially expressed genes of arbuscular mycorrhizal (AM) fungus Rhizophagus irregularis during AM symbiosis, we performed transcriptome analysis using illumina Hiseq2000. Total RNA was isolated from the fungus in axenic, strigolactone-treated and monoxenic culture. In axenic and strigolactone-treated culture, germinated spores or elongated mycelia were harvested at a day and a week after inoculation, respectively. In monoxenic culture, R. irregularis and Daucus carota or Medicago truncatula were cocultivated, only extraradical mycelia were harvested at 4, 6 and 8 weeks after spore inoculation, respectively.
data type Transcriptome or Gene Expression
publication
properties 
{...}
dbXrefs
sra-run  DRR023818DRR023819DRR023820DRR023821DRR023822DRR023823DRR023824DRR023825DRR023826DRR023827 More
sra-submission  DRA002591
biosample  SAMD00020566SAMD00020567SAMD00020568SAMD00020584SAMD00020585SAMD00020586SAMD00020581SAMD00020582SAMD00020583SAMD00020572 More
sra-study  DRP002784
sra-sample  DRS021412DRS021413DRS021414DRS021430DRS021431DRS021432DRS021427DRS021428DRS021429DRS021418 More
sra-experiment  DRX021574DRX021575DRX021576DRX021577DRX021578DRX021579DRX021580DRX021581DRX021582DRX021583 More
distribution JSONJSON-LD
Download
ddbj_core_bioproject.xml  HTTPS FTP
status public
visibility unrestricted-access
dateCreated 2014-10-02T10:59:35+09:00
dateModified 2015-10-05T13:10:37+09:00
datePublished 2015-10-05T13:10:37+09:00