home > bioproject > PRJDB3322
identifier PRJDB3322
type bioproject
sameAs
organism Hepatitis C virus
title MiSeq analysis on the RT-PCR amplicon of HCV from human sera.
description The study focused on the question of whether HCV/HIV coinfected hemophiliacs, who are suspected of being repeatedly exposed to unheated blood-related products, differ in the composition of hepatitis C viral quasispecies (genotypes and resistance mutations), from HCV monoinfected non-hemophiliacs with or without a history of whole blood transfusion. Twenty one clinical serum samples were included in this study for the analysis on the HCV core and NS3 protease region for genotyping and the NS3 protease region for naturally occurring resistance-associated variants, by Illumina MiSeq deep sequencing .
data type Genome Sequencing
publication
25748426
properties 
{...}
dbXrefs
sra-run  DRR026777DRR026778DRR026779DRR026780DRR026781DRR026782DRR026783DRR026784DRR026785DRR026786 More
sra-submission  DRA002750
biosample  SAMD00023239SAMD00023240SAMD00023241SAMD00023242SAMD00023243SAMD00023244SAMD00023245SAMD00023246SAMD00023247SAMD00023248 More
sra-study  DRP002604
sra-sample  DRS019339DRS019340DRS019341DRS019342DRS019343DRS019344DRS019345DRS019346DRS019347DRS019348 More
sra-experiment  DRX024372DRX024373DRX024374DRX024375DRX024376DRX024377DRX024378DRX024379DRX024380DRX024381 More
distribution JSONJSON-LD
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status public
visibility unrestricted-access
dateCreated 2014-11-19T12:44:29+09:00
dateModified 2015-03-27T04:09:19+09:00
datePublished 2015-03-27T04:09:19+09:00