home > bioproject > PRJDB3347
identifier PRJDB3347
type bioproject
sameAs
organism sponge metagenome
title Community structure of microbes retrieved electrically from cryopreserved sponges
description Microbial communities have a key role in the physiology of the sponge host, and it is therefore essential to understand the stability and specificity of sponge-symbiont associations. The purpose of this study is to develop a novel electrical retrieval method of living sponge associated microorganisms from -80 °C frozen marine sponge and to estimate the retrieval bias. A-0.3-V vs. Ag/AgCl constant potential for 2h at 9 °C induced attachment of the sponge associated microorganisms on an optically transpotent working electrode. The electrically attached microorganisms from homogenized Callyspongia confoederata and Spirastrella insignisis tissues have an intact cell membrane and an intracellular dehydrogenase activity. Using the Ion torrent sequencing technology, we conducted a comparison of sponge bacterial communities.
data type Targeted Locus (Loci)
publication
26242755
properties 
{...}
dbXrefs
sra-run  DRR027447DRR027448DRR027449DRR027450DRR027451DRR027452DRR027453DRR027454
sra-submission  DRA002827DRA002828DRA002829DRA002830
biosample  SAMD00023374SAMD00023375SAMD00023376SAMD00023377
sra-study  DRP002737
sra-sample  DRS020819DRS020818DRS020820DRS020821
sra-experiment  DRX025042DRX025043DRX025044DRX025045DRX025046DRX025047DRX025048DRX025049
distribution JSONJSON-LD
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status public
visibility unrestricted-access
dateCreated 2014-12-05T05:20:14+09:00
dateModified 2015-09-04T00:37:39+09:00
datePublished 2015-09-04T00:37:39+09:00