home > bioproject > PRJDB3938
identifier PRJDB3938
type bioproject
sameAs
organism museum specimen metagenome
title Sequencing extinct Japanese otter
description We determined the mitochondrial genome sequence of extinct Japanese otters (Mammalia, Carnivora, Lutrinae) using museum specimens (38-100 years old) to clarify their phylogenetic and taxonomic status. We also inferred this otter's evolutionary history according to molecular divergence time estimation. Previous study suggested that this animal is a distinct species, but International Union for the Conservation of Nature Red List treats the Japanese otter as a subspecies of Lutra lutra. Until the 1920s, this animal was also distributed widely throughout the four main Japanese islands. However, there have been no reported sightings of this animal in the wild since 1979. In 2012, the Ministry of the Environment of Japan announced that the Japanese otter was extinct in Japan.
data type Metagenome
publication
10.1371/journal.pone.0149341
properties 
{...}
dbXrefs
sra-run  DRR035927DRR035928
sra-submission  DRA003576
biosample  SAMD00031375SAMD00031376
sra-study  DRP003045
sra-sample  DRS026006DRS026007
sra-experiment  DRX032560DRX032561
distribution JSONJSON-LD
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status public
visibility unrestricted-access
dateCreated 2015-05-24T06:50:56+09:00
dateModified 2016-03-04T03:15:31+09:00
datePublished 2016-03-04T03:15:31+09:00