home > bioproject > PRJDB4000
identifier PRJDB4000
type bioproject
sameAs
organism rhizosphere metagenome
title Rhizotypes of plant-root fungal biome
description Here we show that diverse root-associated fungi form highly-compartmentalized networks of coexistence within host roots and that the structure of the fungal symbiont communities is partitioned into semi-discrete types even within a single host plant population. Intensive DNA-barcoding of root-associated fungi in a monodominant beech forest reveals that the network representing symbiont-symbiont co-occurrence pattern is compartmentalized into clear modules, which consist of diverse functional groups of mycorrhizal and endophytic fungi. As a result, each terminal root of the host plant is colonized by either of the two largest fugal species sets, forming rhizotypes. Thus, species-rich root microbiome can have alternative stable states as recently shown in relationship between gut microbiome type and human health.
data type Metagenome
publication
properties 
{...}
dbXrefs
sra-run  DRR037757DRR037758DRR037759DRR037760DRR037761DRR037762DRR037763DRR037764DRR037765DRR037766 More
sra-submission  DRA003730
biosample  SAMD00032107SAMD00032108SAMD00032109SAMD00032110SAMD00032111SAMD00032112SAMD00032113SAMD00032114SAMD00032115SAMD00032116 More
sra-study  DRP003079
sra-sample  DRS026990DRS026991DRS026992DRS026993DRS026994DRS026995DRS026996DRS026997DRS026998DRS026999 More
sra-experiment  DRX033985DRX033986DRX033987DRX033988DRX033989DRX033990DRX033991DRX033992DRX033993DRX033994 More
distribution JSONJSON-LD
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status public
visibility unrestricted-access
dateCreated 2015-06-16T01:19:00+09:00
dateModified 2016-04-07T13:17:20+09:00
datePublished 2016-04-07T13:17:20+09:00