home > bioproject > PRJDB4007
identifier PRJDB4007
type bioproject
sameAs
organism Helianthus annuus
title Identification of centromeric DNA sequences by ChIP-Seq
description The aim of this investigation is identification of centromeric DNA sequences of sunflower by ChIP-Seq using an anti-HaCENH3 (a centromere specific histone H3 variant) antibody. The input fraction contains DNA from micrococcal nuclease digested sunflower nucleosomes, and that was used for the ChIP-Seq. The ChIP fraction contains DNA that precipitated by a ChIP using the anti-HaCENH3 antibody. Sequencing was conducted by using MiSeq (Illumina) with Pair-end 2x300 bp protocol.
data type Epigenomics
publication
10.3389/fpls.2015.00912
properties 
{...}
dbXrefs
sra-run  DRR037299DRR037300
sra-submission  DRA003719
biosample  SAMD00034148SAMD00034149
sra-study  DRP002793
sra-sample  DRS021567DRS021568
sra-experiment  DRX033533DRX033534
distribution JSONJSON-LD
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status public
visibility unrestricted-access
dateCreated 2015-06-17T00:37:43+09:00
dateModified 2015-11-17T04:57:08+09:00
datePublished 2015-10-15T13:00:16+09:00