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identifier PRJDB4011
type bioproject
sameAs
organism uncultured marine microorganism
title Diatom-specific rbcL sequences, PERCOM project
description The aim of this study was to estimate the effects of CO2 availability on the community structure and photosynthetic physiology of diatoms in the spring Oyashio water. Water samples were collected from 10 m depth at a station PH3 in the Oyashio region of the western North Pacific on 9 May, during the KT-11-7 cruise of R/V Tansei-Maru (JAMSTEC). A short-term (3 days) on-deck incubation experiment was conducted under different CO2 levels (180, 350, 750, and 1000 ppm), as a part of the Plankton Ecosystem Response to CO2 manipulation Study (PERCOM). The DNA and RNA samples were collected on days 0 and 3. The sequences of diatom-specific rbcL fragments were then obtained using Ion Torrent amplicon sequencing technology.
data type Targeted Locus (Loci) Transcriptome or Gene Expression
publication
27124280
properties 
{...}
dbXrefs
sra-run  DRR037352DRR037353DRR037354DRR037355DRR037356DRR037357DRR037358DRR037359DRR037360DRR037361
sra-submission  DRA003722
biosample  SAMD00034381SAMD00034382SAMD00034383SAMD00034384SAMD00034385SAMD00034386SAMD00034387SAMD00034388SAMD00034389SAMD00034390
sra-study  DRP003114
sra-sample  DRS029662DRS029663DRS029664DRS029665DRS029666DRS029667DRS029668DRS029669DRS029670DRS029671
sra-experiment  DRX033586DRX033587DRX033588DRX033589DRX033590DRX033591DRX033592DRX033593DRX033594DRX033595
distribution JSONJSON-LD
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status public
visibility unrestricted-access
dateCreated 2015-06-22T01:07:30+09:00
dateModified 2016-05-11T13:00:31+09:00
datePublished 2016-05-11T13:00:30+09:00