home > bioproject > PRJDB4079
identifier PRJDB4079
type bioproject
sameAs
organism Homo sapiens
title RNA-seq analysis of RPTEC under hypoxic condition with Dznep.
description Hypoxia plays important roles in progression of chronic kidney diseases. HIF1 (hypoxia inducible factor 1) is a master transcriptional factor under hypoxic condition. To clarify the molecular mechanisms of HIF1 and identify novel linc RNAs under hypoxia, we performed RNA-seq using human renal proximal tubular epithelial cells (RPTEC). In addition, we use Dznep which is an inhibitor of H3K27me3 to examine the relationship between HIF1 and epigenetic modifiers under hypoxia.
data type Transcriptome or Gene Expression
publication
properties 
{...}
dbXrefs
sra-run  DRR040676DRR040677DRR040678DRR040679DRR040680DRR040681
sra-submission  DRA003787
biosample  SAMD00035529SAMD00035530SAMD00035531SAMD00035532SAMD00035533SAMD00035534
sra-study  DRP004442
sra-sample  DRS075092DRS075093DRS075094DRS075095DRS075096DRS075097
sra-experiment  DRX036614DRX036615DRX036616DRX036617DRX036618DRX036619
distribution JSONJSON-LD
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status public
visibility unrestricted-access
dateCreated 2015-07-23T07:30:20+09:00
dateModified 2018-09-01T13:03:57+09:00
datePublished 2018-09-01T13:03:57+09:00