home > bioproject > PRJDB4080
identifier PRJDB4080
type bioproject
sameAs
organism Homo sapiens
title smRNA-seq analysis of HK2 under hypoxic condition with Dznep.
description Hypoxia plays important roles in progression of chronic kidney diseases. HIF1 (hypoxia inducible factor 1) is a master transcriptional factor under hypoxic condition. To clarify the molecular mechanisms of HIF1 and identify novel small RNAs under hypoxia, we performed RNA-seq using human renal proximal tubular cells (HK2: human kidney-2). In addition, we use Dznep which is an inhibitor of H3K27me3 to examine the relationship between HIF1 and epigenetic modifiers under hypoxia.
data type Transcriptome or Gene Expression
publication
properties 
{...}
dbXrefs
sra-run  DRR040682DRR040683DRR040684DRR040685DRR040686DRR040687DRR040688DRR040689DRR040690
sra-submission  DRA003788
biosample  SAMD00035535SAMD00035536SAMD00035537SAMD00035538SAMD00035539SAMD00035540
sra-study  DRP004444
sra-sample  DRS075099DRS075100DRS075101DRS075102DRS075103DRS075104
sra-experiment  DRX036620DRX036621DRX036622DRX036623DRX036624DRX036625DRX036626DRX036627DRX036628
distribution JSONJSON-LD
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status public
visibility unrestricted-access
dateCreated 2015-07-23T07:31:26+09:00
dateModified 2018-09-01T13:03:57+09:00
datePublished 2018-09-01T13:03:57+09:00