home > bioproject > PRJDB4223
identifier PRJDB4223
type bioproject
sameAs
organism fossil metagenome
title Nuclear genome sequencing of Sanganji Jomon
description Nuclear genome of two Neolithic Japanese hunter-gatherers, Sanganji Jomons, were sequenced. The genetic origin of Jomon people and the genetic relationship between modern East Eurasians are not well understand, and clarifying those questions is important for understanding the history of East Eurasians. Mitochondrial DNA of Jomon people was well studied, and this give direct evidence of Jomon genotype. However, mitochondrial DNA is a single non-recombining molecule and carries limited genetic information. Therefore, the analysis of Jomon nuclear genome is necessary. From two individuals (sample A and sample B), three DNA libraries (A1, A2, and B) were prepared, and frequency of contaminations were inferred from mitochondrial DNA Capture method. Shotgun sequences were also conducted with Illumina GAIIx and Hiseq 2000.
data type Genome Sequencing
publication
27581845
properties 
{...}
dbXrefs
sra-run  DRR046398DRR046399DRR046400DRR046401DRR046402DRR046403DRR046404DRR046405DRR046406DRR046407 More
sra-submission  DRA004001
biosample  SAMD00041000SAMD00041001SAMD00041002
sra-study  DRP002782
sra-sample  DRS021185DRS021186DRS021187
sra-experiment  DRX041686DRX041687DRX041688DRX041689DRX041690DRX041691DRX041692DRX041693DRX041694DRX041695 More
distribution JSONJSON-LD
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status public
visibility unrestricted-access
dateCreated 2015-06-04T18:37:22+09:00
dateModified 2016-09-04T23:43:00+09:00
datePublished 2015-10-01T13:27:35+09:00