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identifier PRJDB4321
type bioproject
organism Prunus
title Small RNA-Seq analysis in various Prunus species infected with ALSV vector
description We assessed the VIGS efficiency of ALSV vectors in a wide range of Prunus species and cultivars, and found that ALSV vectors could successfully induce VIGS of endogenous PDS genes in several cultivars of apricot, sweet cherry, and almond. Small RNA-Seq analysis revealed preferential accumulation of antisense siRNAs in PDS-silenced leaves, suggesting their role as guide RNAs in VIGS.
data type Small RNA-Seq
sra-run  DRR049623DRR049624DRR049625DRR049626DRR049627DRR049628
sra-submission  DRA004183
biosample  SAMD00042836SAMD00042837SAMD00042838SAMD00042839SAMD00042840SAMD00042841
sra-study  DRP002827
sra-sample  DRS021994DRS021995DRS021996DRS021997DRS021998DRS021999
sra-experiment  DRX044666DRX044667DRX044668DRX044669DRX044670DRX044671
distribution JSONJSON-LD
ddbj_core_bioproject.xml  HTTPS FTP
status public
visibility unrestricted-access
dateCreated 2015-10-29T07:49:20+09:00
dateModified 2015-11-30T13:00:53+09:00
datePublished 2015-11-30T13:00:53+09:00