home > bioproject > PRJDB4336
identifier PRJDB4336
type bioproject
sameAs
organism Alligator mississippiensis
title RNA-seq analysis of alligator gonad during sex determination
description The American alligator (Alligator mississippiensis) displays temperature-dependent sex determination (TSD), in which incubation temperature during embryonic development determines the sexual fate of the individual. Alligator sex is determined during stage 21-24, and the gonad is bipotential prior to sex determination. In this study, A. mississippiensis embryos were incubated under female-producing temperature (30C) until embryonic stage 19, at which point the eggs were split into two incubating temperatures, male- (33.5C) and female-producing temperature, and sampled over the course of 36 days. This study was conducted to analyze the influence of initial environmental temperature upon gene expression and also extensively profile gonad-specific gene expression pattern that occurs during TSD by using RNA-seq analysis.
data type Transcriptome or Gene Expression
publication
properties 
{...}
dbXrefs
sra-run  DRR048609DRR048610DRR048611DRR048612DRR048613DRR048614DRR048615DRR048616DRR048617DRR048618 More
sra-submission  DRA004128DRA004129DRA004130DRA004131DRA004132DRA004133DRA004134DRA004135DRA004136DRA004137 More
biosample  SAMD00042713SAMD00042714SAMD00042712SAMD00042715SAMD00042716SAMD00042717SAMD00042718SAMD00042719SAMD00042720SAMD00042721 More
sra-study  DRP002806
sra-sample  DRS021754DRS021755DRS021753DRS021792DRS021793DRS021794DRS021788DRS021789DRS021790DRS021757 More
sra-experiment  DRX043892DRX043893DRX043894DRX043895DRX043896DRX043897DRX043898DRX043899DRX043900DRX043901 More
distribution JSONJSON-LD
Download
ddbj_core_bioproject.xml  HTTPS FTP
status public
visibility unrestricted-access
dateCreated 2015-11-04T00:31:47+09:00
dateModified 2015-11-05T06:15:23+09:00
datePublished 2015-11-05T06:15:23+09:00