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identifier PRJDB4399
type bioproject
sameAs
organism marine metagenome
title Diversity and Abundance of Ammonia Oxidizing Archaea in the Coastal Sea Surface Microlayer
description This is a part of a project targeting the distribution and diversity of ammonia oxidizing archaea in the sea surface microlayer (SML). Previous reports have reported the high abundance of Thaumarcheota in the SML in lake environments but the distribution of archaea in the SML of marine environments have yet to be investigated. Using 16S rRNA gene pyrosequencing and qualitative PCR techniques, we found that the relative abundance of phylum Thaumarchaeota can also be high in the SML and their abundances were weakly co-related to the chlorophyll-a and transparent exopolymer particles concentrations in the SML. Additionally, archaeal groups originating from soil or terrestrial were also found in higher proportions in the SML compared to the underlying water (20cm).
data type Metagenome Targeted Locus (Loci)
publication
properties 
{...}
dbXrefs
sra-run  DRR050061DRR050062DRR050063DRR050064DRR050065DRR050066DRR050067DRR050068DRR050069DRR050070
sra-submission  DRA004205
biosample  SAMD00043872SAMD00043873SAMD00043874SAMD00043875SAMD00043877SAMD00043878SAMD00043879SAMD00043880SAMD00043881SAMD00043883
sra-study  DRP002839
sra-sample  DRS022172DRS022173DRS022174DRS022175DRS022176DRS022177DRS022178DRS022179DRS022180DRS022181
sra-experiment  DRX045103DRX045104DRX045105DRX045106DRX045107DRX045108DRX045109DRX045110DRX045111DRX045112
distribution JSONJSON-LD
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status public
visibility unrestricted-access
dateCreated 2015-12-01T07:54:05+09:00
dateModified 2015-12-04T08:29:08+09:00
datePublished 2015-12-04T08:29:08+09:00