home > bioproject > PRJDB4610
identifier PRJDB4610
type bioproject
sameAs
organism Homo sapiens
title b-catenin-mediated upregulation of the ASBEL-TCF3 complex is critical for tumorigenicity of colon cancer cells
description 1. The canonical Wnt/b-catenin signaling pathway plays essential roles in the regulation of the self-renewal of stem and progenitor cells, proliferation, and tumorigenesis of cancer cells. To identify novel genes that are the direct targets of b-catenin in colon cancer cells, we performed RNA-seq and ChIP-seq analysis using DLD-1 cells. 2. We found that b-catenin directly upregulates expression of lncRNA ASBEL. We previously identified ASBEL as an antisense transcript of the ANA/BTG3 gene. We further discovered that ASBEL promotes the tumorigenicity of ovarian cancer cells. ASBEL may inhibit ANA/BTG3 protein expression by forming ASBEL-ANA/BTG3 RNA duplexes, which are retained in the nucleus. ASBEL is required for the tumorigenicity of colon tumor cells. We discovered that knockdown of ASBEL increased the expression of ANA/BTG3 protein in colorectal cancer cells. However, ANA/BTG3 protein levels may not be important for the proliferation of colorectal cancer cells. To elucidate the other potential functions of ASBEL in colorectal cancer cells, we analyzed ASBEL-regulated genes by RNA-seq analysis using HCT116 cells.
data type Epigenomics Transcriptome or Gene Expression
publication
properties 
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dbXrefs
sra-run  DRR056752DRR056753DRR056754DRR056755DRR056756DRR056757DRR056758DRR056759DRR056760DRR056761
sra-submission  DRA004515
biosample  SAMD00047744SAMD00047745SAMD00047681SAMD00047682SAMD00047675SAMD00047676SAMD00047677SAMD00047678SAMD00047679SAMD00047680
sra-study  DRP003300
sra-sample  DRS034490DRS034491DRS034488DRS034489DRS034482DRS034483DRS034484DRS034485DRS034486DRS034487
sra-experiment  DRX051429DRX051430DRX051431DRX051432DRX051433DRX051434DRX051435DRX051436DRX051437DRX051438
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status public
visibility unrestricted-access
dateCreated 2016-02-29T04:37:53+09:00
dateModified 2016-10-08T13:07:00+09:00
datePublished 2016-10-08T13:07:00+09:00