home > bioproject > PRJDB4781
identifier PRJDB4781
type bioproject
sameAs
organism Euglena gracilis
title RNAseqs of Euglena gracilis under aerobic/anaerobic condition
description The metabolic mechanism of algae has been attracting attention as a biological system of energy supply and carbon sequestration, which can be applied to realize a low-carbon society. Euglena is one of the well-known protists for studying biological systems of energy supply and carbon sequestration, because of its unique life style that can switch between heterotrophic (animal-like) and autotrophic (algae-like). To figure out the entire picture of the metabolic pathways of the organism, we conducted a series of RNA sequencing for a species of euglena, Euglena gracilis. For this purpose, we created 6 sequence libraries each of which is corresponding to the unique combination of environmental stresses and culturing time. Prefixes for each sequence run are as follows; E-0h-1, E-0h-2, E-0h-3, E-0h-4 : Control, E-N2-4h-1, E-N2-4h-2, E-N2-4h-3, E-N2-4h-4: Stirring Culture for 4 hours under N2 aeration, E-N2-24h-1, E-N2-24h-2, E-N2-24h-3: Stirring Culture for 24 hours under N2 aeration, E-O2-4h-1, E-O2-4h-2, E-O2-4h-3: Stirring Culture for 4 hours under O2 aeration, E-O2-24h-1, E-O2-24h-2, E-O2-24h-3: Stirring Culture for 24 hours under N2 aeration, E-S-4h-1, E-S-4h-2, E-S-4h-3, E-S-4h-4: Resting Culture for 4 hours under O2 aeration, and E-S-24h-1, E-S-24h-2, E-S-24h-3: Resting Culture for 24 hours under N2 aeration.
data type Transcriptome or Gene Expression
publication
properties 
{...}
dbXrefs
sra-run  DRR110356DRR110357DRR110358DRR110359DRR110360DRR110361DRR110362DRR110363DRR110364DRR110365 More
sra-submission  DRA006298
biosample  SAMD00098424SAMD00098425SAMD00098426SAMD00098427SAMD00098428SAMD00098429SAMD00098430SAMD00098431SAMD00098432SAMD00098433 More
sra-study  DRP005530
sra-sample  DRS111863DRS111864DRS111865DRS111866DRS111867DRS111868DRS111869DRS111870DRS111871DRS111872 More
sra-experiment  DRX103445DRX103446DRX103447DRX103448DRX103449DRX103450DRX103451DRX103452DRX103453DRX103454 More
distribution JSONJSON-LD
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ddbj_core_bioproject.xml  HTTPS FTP
status public
visibility unrestricted-access
dateCreated 2016-04-20T06:32:23+09:00
dateModified 2019-10-23T13:12:37+09:00
datePublished 2019-10-23T13:12:36+09:00