home > bioproject > PRJDB5210
identifier PRJDB5210
type bioproject
sameAs
organism Arabidopsis thaliana
title Bisulfite sequencing of Arabidopsis T-DNA mutants
description Introduction of transgenes into plant genomes by Agrobacterium-mediated transformation has been widely used for random mutagenesis of genomes, generation of transgenic plants conferring particular traits, and characterization of gene of interest. However, transgenes are often epigenetically silenced by host genome defense mechanisms. Loss of mutant phenotypes in intronic T-DNA insertion lines by interaction with an additional T-DNA locus, termed T-DNA suppression, has been observed in Arabidopsis thaliana. In this study, DNA methylation of intronic T-DNAs before and after suppression was investigated.
data type Epigenomics
publication
properties 
{...}
dbXrefs
sra-run  DRR074674DRR074675DRR074676DRR074677DRR074678DRR074679
sra-submission  DRA005188
biosample  SAMD00064399SAMD00064400SAMD00064401SAMD00064402SAMD00064403SAMD00064404
sra-study  DRP004475
sra-sample  DRS075499DRS075500DRS075501DRS075502DRS075503DRS075504
sra-experiment  DRX068588DRX068589DRX068590DRX068591DRX068592DRX068593
distribution JSONJSON-LD
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status public
visibility unrestricted-access
dateCreated 2016-10-13T02:17:27+09:00
dateModified 2018-09-20T13:08:08+09:00
datePublished 2018-09-20T13:08:08+09:00