home > bioproject > PRJDB5346
identifier PRJDB5346
type bioproject
sameAs
organism Oryza longistaminata
title Genotyping-by-sequencing of an Oryza longistaminata x Oryza sativa F2 population.
description More than 1,000 F2 individuals from a cross of Oryza longistaminata and Oryza sativa japonica cultivar "Nipponbare" were genotyped. A reduced representation of the genome of each individual was sequenced as described in Poland et al., 2012. SNPs were called using TASSEL4 in combination with in-house data imputation and error correction.
data type Genome Sequencing Phenotype and Genotype Targeted Locus (Loci)
publication
properties 
{...}
dbXrefs
sra-run  DRR077434DRR077435DRR077436DRR077437DRR077438DRR077439DRR077440DRR077441DRR077442DRR077443 More
sra-submission  DRA005304DRA005305DRA005306DRA005307
biosample  SAMD00067495SAMD00067496SAMD00067497SAMD00067498SAMD00067499SAMD00067500SAMD00067501SAMD00067502SAMD00067503SAMD00067504 More
sra-study  DRP003396
sra-sample  DRS038080DRS038081DRS038082DRS038083DRS038084DRS038085DRS038086DRS038087DRS038088DRS038089 More
sra-experiment  DRX071278DRX071279DRX071280DRX071281DRX071282DRX071283DRX071284DRX071285DRX071286DRX071287 More
distribution JSONJSON-LD
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status public
visibility unrestricted-access
dateCreated 2016-11-28T22:46:36+09:00
dateModified 2017-01-01T13:25:41+09:00
datePublished 2017-01-01T13:25:37+09:00